RNA–Protein interactions for RNA: ENST00000307367.2

CLCN5-201, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-201ENST00000307367 NISCHQ9Y2I1 1504 aa16.63■□□□□ 0.25
CLCN5-201ENST00000307367 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
CLCN5-201ENST00000307367 ZCCHC6Q5VYS8 1495 aaKnown RBP13.96□□□□□ -0.17
CLCN5-201ENST00000307367 DCAF1Q9Y4B6 1507 aa13.79□□□□□ -0.2
CLCN5-201ENST00000307367 ABCC9O60706 1549 aa13.78□□□□□ -0.2
CLCN5-201ENST00000307367 DCAF8L2P0C7V8 631 aa13.69□□□□□ -0.22
CLCN5-201ENST00000307367 MYO15BQ96JP2 1530 aa13.66□□□□□ -0.22
CLCN5-201ENST00000307367 NACADO15069 1562 aa13.59□□□□□ -0.23
CLCN5-201ENST00000307367 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
CLCN5-201ENST00000307367 SHROOM4Q9ULL8 1493 aa13.44□□□□□ -0.26
CLCN5-201ENST00000307367 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
CLCN5-201ENST00000307367 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.29
CLCN5-201ENST00000307367 BICRAQ9NZM4 1560 aa13.05□□□□□ -0.32
CLCN5-201ENST00000307367 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLCN5-201ENST00000307367 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
CLCN5-201ENST00000307367 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.35
CLCN5-201ENST00000307367 BAZ1AQ9NRL2 1556 aaPredicted RBP12.87□□□□□ -0.35
CLCN5-201ENST00000307367 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
CLCN5-201ENST00000307367 MROH2BQ7Z745 1585 aa12.82□□□□□ -0.36
CLCN5-201ENST00000307367 SMARCA4P51532 1647 aa12.81□□□□□ -0.36
CLCN5-201ENST00000307367 WIZO95785 1651 aa12.73□□□□□ -0.37
CLCN5-201ENST00000307367 PEG3Q9GZU2 1588 aa12.68□□□□□ -0.38
CLCN5-201ENST00000307367 EIF4G1Q04637 1599 aaKnown RBP12.67□□□□□ -0.38
CLCN5-201ENST00000307367 SMARCA2P51531 1590 aa12.62□□□□□ -0.39
CLCN5-201ENST00000307367 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
CLCN5-201ENST00000307367 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
CLCN5-201ENST00000307367 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
CLCN5-201ENST00000307367 NCAPD3P42695 1498 aa12.52□□□□□ -0.41
CLCN5-201ENST00000307367 HMGXB3Q12766 1538 aa12.52□□□□□ -0.41
CLCN5-201ENST00000307367 CC2D2AQ9P2K1 1620 aa12.5□□□□□ -0.41
CLCN5-201ENST00000307367 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
CLCN5-201ENST00000307367 CHIC1Q5VXU3 224 aa12.34□□□□□ -0.43
CLCN5-201ENST00000307367 CFTRP13569 1480 aa12.22□□□□□ -0.45
CLCN5-201ENST00000307367 PRDM2Q13029 1718 aa12.21□□□□□ -0.46
CLCN5-201ENST00000307367 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
CLCN5-201ENST00000307367 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
CLCN5-201ENST00000307367 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
CLCN5-201ENST00000307367 ABCC8Q09428 1581 aa12.16□□□□□ -0.46
CLCN5-201ENST00000307367 LAMC3Q9Y6N6 1575 aa12.13□□□□□ -0.47
CLCN5-201ENST00000307367 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
CLCN5-201ENST00000307367 NESP48681 1621 aa12.07□□□□□ -0.48
CLCN5-201ENST00000307367 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
CLCN5-201ENST00000307367 FANCD2Q9BXW9 1451 aa12.05□□□□□ -0.48
CLCN5-201ENST00000307367 TOP2BQ02880 1626 aa12.04□□□□□ -0.48
CLCN5-201ENST00000307367 BIVM-ERCC5R4GMW8 1640 aa12.04□□□□□ -0.48
CLCN5-201ENST00000307367 PDS5BQ9NTI5 1447 aa12.02□□□□□ -0.49
CLCN5-201ENST00000307367 AEBP2Q6ZN18 517 aaPredicted RBP12.01□□□□□ -0.49
CLCN5-201ENST00000307367 CUX1P39880 1505 aa12□□□□□ -0.49
CLCN5-201ENST00000307367 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
CLCN5-201ENST00000307367 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
CLCN5-201ENST00000307367 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
CLCN5-201ENST00000307367 EEA1Q15075 1411 aa11.93□□□□□ -0.5
CLCN5-201ENST00000307367 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
CLCN5-201ENST00000307367 SOGA1O94964 1423 aa11.91□□□□□ -0.5
CLCN5-201ENST00000307367 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
CLCN5-201ENST00000307367 URB2Q14146 1524 aaKnown RBP11.89□□□□□ -0.51
CLCN5-201ENST00000307367 FGD5Q6ZNL6 1462 aa11.89□□□□□ -0.51
CLCN5-201ENST00000307367 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
CLCN5-201ENST00000307367 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
CLCN5-201ENST00000307367 POLA1P09884 1462 aaPredicted RBP11.85□□□□□ -0.51
CLCN5-201ENST00000307367 ERCC6Q03468 1493 aa11.84□□□□□ -0.51
CLCN5-201ENST00000307367 LOC105371045A0A1W2PR82 267 aa11.83□□□□□ -0.52
CLCN5-201ENST00000307367 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
CLCN5-201ENST00000307367 KIF27Q86VH2 1401 aa11.82□□□□□ -0.52
CLCN5-201ENST00000307367 WDR62O43379 1518 aa11.81□□□□□ -0.52
CLCN5-201ENST00000307367 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
CLCN5-201ENST00000307367 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
CLCN5-201ENST00000307367 CUX2O14529 1486 aa11.79□□□□□ -0.52
CLCN5-201ENST00000307367 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
CLCN5-201ENST00000307367 RAD54L2Q9Y4B4 1467 aa11.78□□□□□ -0.52
CLCN5-201ENST00000307367 KIF21BO75037 1637 aa11.77□□□□□ -0.52
CLCN5-201ENST00000307367 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
CLCN5-201ENST00000307367 GOLGA3Q08378 1498 aa11.74□□□□□ -0.53
CLCN5-201ENST00000307367 PRXQ9BXM0 1461 aa11.72□□□□□ -0.53
CLCN5-201ENST00000307367 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.53
CLCN5-201ENST00000307367 ERICH3Q5RHP9 1530 aa11.71□□□□□ -0.53
CLCN5-201ENST00000307367 IFT140Q96RY7 1462 aa11.71□□□□□ -0.54
CLCN5-201ENST00000307367 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.54
CLCN5-201ENST00000307367 IGF1RP08069 1367 aa11.7□□□□□ -0.54
CLCN5-201ENST00000307367 TNIKQ9UKE5 1360 aa11.69□□□□□ -0.54
CLCN5-201ENST00000307367 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
CLCN5-201ENST00000307367 GAPVD1Q14C86 1478 aa11.67□□□□□ -0.54
CLCN5-201ENST00000307367 CUL7Q14999 1698 aa11.67□□□□□ -0.54
CLCN5-201ENST00000307367 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
CLCN5-201ENST00000307367 UBTFP17480 764 aaKnown RBP11.66□□□□□ -0.54
CLCN5-201ENST00000307367 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.54
CLCN5-201ENST00000307367 PBRM1Q86U86 1689 aa11.64□□□□□ -0.55
CLCN5-201ENST00000307367 AQRO60306 1485 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLCN5-201ENST00000307367 ZNF608Q9ULD9 1512 aaPredicted RBP11.61□□□□□ -0.55
CLCN5-201ENST00000307367 EIF4G3O43432 1585 aaKnown RBP11.61□□□□□ -0.55
CLCN5-201ENST00000307367 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
CLCN5-201ENST00000307367 GRIN2BQ13224 1484 aa11.6□□□□□ -0.55
CLCN5-201ENST00000307367 ADAMTS12P58397 1594 aa11.56□□□□□ -0.56
CLCN5-201ENST00000307367 FHAD1B1AJZ9 1412 aa11.56□□□□□ -0.56
CLCN5-201ENST00000307367 CLIP1P30622 1438 aa11.54□□□□□ -0.56
CLCN5-201ENST00000307367 CTTNBP2Q8WZ74 1663 aa11.53□□□□□ -0.56
CLCN5-201ENST00000307367 MAGI1Q96QZ7 1491 aaPredicted RBP11.52□□□□□ -0.56
CLCN5-201ENST00000307367 SNAPC4Q5SXM2 1469 aa11.52□□□□□ -0.57
CLCN5-201ENST00000307367 SYNJ2O15056 1496 aa11.47□□□□□ -0.57
CLCN5-201ENST00000307367 GRIN2AQ12879 1464 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms