RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 PLPPR3Q6T4P5 718 aa25.92■■□□□ 1.74
NDUFA3-201ENST00000303553 KDM5DQ9BY66 1539 aa25.9■■□□□ 1.74
NDUFA3-201ENST00000303553 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
NDUFA3-201ENST00000303553 ZC3H13Q5T200 1668 aaKnown RBP25.88■■□□□ 1.73
NDUFA3-201ENST00000303553 NCOA1Q15788 1441 aa25.88■■□□□ 1.73
NDUFA3-201ENST00000303553 RRP7BPQ9NSQ0 103 aa25.87■■□□□ 1.73
NDUFA3-201ENST00000303553 RRBP1Q9P2E9 1410 aaKnown RBP25.87■■□□□ 1.73
NDUFA3-201ENST00000303553 CHIC2Q9UKJ5 165 aa25.86■■□□□ 1.73
NDUFA3-201ENST00000303553 ZMYM3Q14202 1370 aa25.85■■□□□ 1.73
NDUFA3-201ENST00000303553 CEBPAP49715 358 aaPredicted RBP25.85■■□□□ 1.73
NDUFA3-201ENST00000303553 SETD1BQ9UPS6 1966 aaKnown RBP25.85■■□□□ 1.73
NDUFA3-201ENST00000303553 LMTK3Q96Q04 1460 aa25.84■■□□□ 1.73
NDUFA3-201ENST00000303553 NPATQ14207 1427 aa25.83■■□□□ 1.73
NDUFA3-201ENST00000303553 WASHC2CQ9Y4E1 1318 aa25.82■■□□□ 1.72
NDUFA3-201ENST00000303553 PRDM15P57071 1507 aaPredicted RBP25.81■■□□□ 1.72
NDUFA3-201ENST00000303553 DEPDC5O75140 1603 aa25.81■■□□□ 1.72
NDUFA3-201ENST00000303553 ROCK1Q13464 1354 aa25.81■■□□□ 1.72
NDUFA3-201ENST00000303553 MROH1Q8NDA8 1641 aa25.81■■□□□ 1.72
NDUFA3-201ENST00000303553 UHRF1BP1Q6BDS2 1440 aa25.8■■□□□ 1.72
NDUFA3-201ENST00000303553 PTPRKQ15262 1439 aa25.77■■□□□ 1.72
NDUFA3-201ENST00000303553 ABCC3O15438 1527 aa25.77■■□□□ 1.72
NDUFA3-201ENST00000303553 ANKRD50Q9ULJ7 1429 aa25.75■■□□□ 1.71
NDUFA3-201ENST00000303553 CEP152O94986 1710 aa25.74■■□□□ 1.71
NDUFA3-201ENST00000303553 PZPP20742 1482 aa25.74■■□□□ 1.71
NDUFA3-201ENST00000303553 KANK1Q14678 1352 aa25.74■■□□□ 1.71
NDUFA3-201ENST00000303553 CAMSAP1Q5T5Y3 1602 aa25.73■■□□□ 1.71
NDUFA3-201ENST00000303553 ITGAEP38570 1179 aa25.72■■□□□ 1.71
NDUFA3-201ENST00000303553 MYO3AQ8NEV4 1616 aa25.71■■□□□ 1.71
NDUFA3-201ENST00000303553 ZNF142P52746 1687 aaPredicted RBP25.68■■□□□ 1.7
NDUFA3-201ENST00000303553 VWDEQ8N2E2 1590 aa25.65■■□□□ 1.7
NDUFA3-201ENST00000303553 LMTK2Q8IWU2 1503 aa25.65■■□□□ 1.7
NDUFA3-201ENST00000303553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.65■■□□□ 1.73e-6■■□□□ 11.7
NDUFA3-201ENST00000303553 UNC13BO14795 1591 aa25.65■■□□□ 1.7
NDUFA3-201ENST00000303553 CEP170BQ9Y4F5 1589 aaPredicted RBP25.63■■□□□ 1.69
NDUFA3-201ENST00000303553 ARHGAP31Q2M1Z3 1444 aa25.63■■□□□ 1.69
NDUFA3-201ENST00000303553 TNRQ92752 1358 aa25.62■■□□□ 1.69
NDUFA3-201ENST00000303553 HSPA2P54652 639 aa25.62■■□□□ 1.69
NDUFA3-201ENST00000303553 GCC2Q8IWJ2 1684 aa25.61■■□□□ 1.69
NDUFA3-201ENST00000303553 SPATA31D1Q6ZQQ2 1576 aa25.61■■□□□ 1.69
NDUFA3-201ENST00000303553 A2ML1A8K2U0 1454 aa25.58■■□□□ 1.69
NDUFA3-201ENST00000303553 ERVK-7P63135 1459 aa25.58■■□□□ 1.69
NDUFA3-201ENST00000303553 NLRP1Q9C000 1473 aa25.58■■□□□ 1.69
NDUFA3-201ENST00000303553 EFCAB6Q5THR3 1501 aa25.58■■□□□ 1.68
NDUFA3-201ENST00000303553 FBXO31Q5XUX0 539 aaPredicted RBP25.57■■□□□ 1.68
NDUFA3-201ENST00000303553 TET3O43151 1660 aa25.56■■□□□ 1.68
NDUFA3-201ENST00000303553 IQGAP3Q86VI3 1631 aa25.54■■□□□ 1.68
NDUFA3-201ENST00000303553 CFAP65Q6ZU64 1925 aaKnown RBP25.53■■□□□ 1.68
NDUFA3-201ENST00000303553 HFM1A2PYH4 1435 aa25.53■■□□□ 1.68
NDUFA3-201ENST00000303553 RPRD2Q5VT52 1461 aaKnown RBP25.53■■□□□ 1.68
NDUFA3-201ENST00000303553 NAIPQ13075 1403 aa25.52■■□□□ 1.68
NDUFA3-201ENST00000303553 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
NDUFA3-201ENST00000303553 PLA2R1Q13018 1463 aa25.5■■□□□ 1.67
NDUFA3-201ENST00000303553 DMRT2Q9Y5R5 561 aa25.48■■□□□ 1.67
NDUFA3-201ENST00000303553 UGGT1Q9NYU2 1555 aa25.48■■□□□ 1.67
NDUFA3-201ENST00000303553 NUP155O75694 1391 aa25.46■■□□□ 1.67
NDUFA3-201ENST00000303553 E9PCH4 1651 aa25.42■■□□□ 1.66
NDUFA3-201ENST00000303553 POLR1AO95602 1720 aaPredicted RBP25.41■■□□□ 1.66
NDUFA3-201ENST00000303553 NOS1P29475 1434 aa25.41■■□□□ 1.66
NDUFA3-201ENST00000303553 THEMISQ8N1K5 641 aaPredicted RBP25.41■■□□□ 1.66
NDUFA3-201ENST00000303553 KDM5AP29375 1690 aaKnown RBP25.41■■□□□ 1.66
NDUFA3-201ENST00000303553 UBR1Q8IWV7 1749 aa25.4■■□□□ 1.66
NDUFA3-201ENST00000303553 PKD2Q13563 968 aa25.4■■□□□ 1.66
NDUFA3-201ENST00000303553 SYNMO15061 1565 aa25.39■■□□□ 1.66
NDUFA3-201ENST00000303553 PTPRTO14522 1441 aa25.39■■□□□ 1.66
NDUFA3-201ENST00000303553 PIK3C2BO00750 1634 aa25.37■■□□□ 1.65
NDUFA3-201ENST00000303553 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
NDUFA3-201ENST00000303553 SLC52A1Q9NWF4 448 aa25.34■■□□□ 1.65
NDUFA3-201ENST00000303553 STAG3Q9UJ98 1225 aa25.32■■□□□ 1.64
NDUFA3-201ENST00000303553 ANKLE2Q86XL3 938 aa25.31■■□□□ 1.64
NDUFA3-201ENST00000303553 SPHKAPQ2M3C7 1700 aa25.31■■□□□ 1.64
NDUFA3-201ENST00000303553 ADGRB3O60242 1522 aa25.31■■□□□ 1.64
NDUFA3-201ENST00000303553 NCKAP5LQ9HCH0 1330 aa25.31■■□□□ 1.64
NDUFA3-201ENST00000303553 TRIM52Q96A61 297 aa25.3■■□□□ 1.64
NDUFA3-201ENST00000303553 SLIT1O75093 1534 aa25.28■■□□□ 1.64
NDUFA3-201ENST00000303553 NEURL4Q96JN8 1562 aa25.28■■□□□ 1.64
NDUFA3-201ENST00000303553 IDI1Q13907 227 aa25.28■■□□□ 1.64
NDUFA3-201ENST00000303553 SETD5Q9C0A6 1442 aa25.27■■□□□ 1.64
NDUFA3-201ENST00000303553 ARHGAP23Q9P227 1491 aa25.26■■□□□ 1.63
NDUFA3-201ENST00000303553 MED14O60244 1454 aa25.25■■□□□ 1.63
NDUFA3-201ENST00000303553 IQGAP1P46940 1657 aa25.23■■□□□ 1.63
NDUFA3-201ENST00000303553 SCAF11Q99590 1463 aaKnown RBP25.23■■□□□ 1.63
NDUFA3-201ENST00000303553 TMEM2Q9UHN6 1383 aa25.22■■□□□ 1.63
NDUFA3-201ENST00000303553 NPHP4O75161 1426 aaPredicted RBP25.21■■□□□ 1.63
NDUFA3-201ENST00000303553 SLC4A1APQ9BWU0 796 aaKnown RBP25.21■■□□□ 1.63
NDUFA3-201ENST00000303553 EID1Q9Y6B2 187 aa25.21■■□□□ 1.63
NDUFA3-201ENST00000303553 TMEM131LA2VDJ0 1609 aa25.21■■□□□ 1.63
NDUFA3-201ENST00000303553 TRPM2O94759 1503 aa25.21■■□□□ 1.63
NDUFA3-201ENST00000303553 MYO5BQ9ULV0 1848 aa25.19■■□□□ 1.62
NDUFA3-201ENST00000303553 TXNDC2Q86VQ3 553 aa25.16■■□□□ 1.62
NDUFA3-201ENST00000303553 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
NDUFA3-201ENST00000303553 HDGFP51858 240 aaKnown RBP25.13■■□□□ 1.61
NDUFA3-201ENST00000303553 CLTCL1P53675 1640 aa25.12■■□□□ 1.61
NDUFA3-201ENST00000303553 KIF1BO60333 1816 aa25.12■■□□□ 1.61
NDUFA3-201ENST00000303553 CHGAP10645 457 aaKnown RBP25.12■■□□□ 1.61
NDUFA3-201ENST00000303553 LTBP4Q8N2S1 1624 aa25.12■■□□□ 1.61
NDUFA3-201ENST00000303553 LTKP29376 864 aa25.1■■□□□ 1.61
NDUFA3-201ENST00000303553 CERKQ8TCT0 537 aa25.09■■□□□ 1.61
NDUFA3-201ENST00000303553 MPHOSPH9Q99550 1183 aa25.09■■□□□ 1.61
NDUFA3-201ENST00000303553 ZFYVE9O95405 1425 aa25.09■■□□□ 1.61
NDUFA3-201ENST00000303553 RIMS2Q9UQ26 1411 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms