RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 MYOM3Q5VTT5 1437 aa16.6■□□□□ 0.25
ABR-202ENST00000302538 VGFO15240 615 aaPredicted RBP16.59■□□□□ 0.25
ABR-202ENST00000302538 FRAT2O75474 233 aaPredicted RBP16.59■□□□□ 0.25
ABR-202ENST00000302538 MCCP23508 829 aa16.58■□□□□ 0.25
ABR-202ENST00000302538 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
ABR-202ENST00000302538 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
ABR-202ENST00000302538 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
ABR-202ENST00000302538 EFCAB5A4FU69 1503 aa16.56■□□□□ 0.24
ABR-202ENST00000302538 KLHL34Q8N239 644 aa16.56■□□□□ 0.24
ABR-202ENST00000302538 ANP32EQ9BTT0 268 aa16.56■□□□□ 0.24
ABR-202ENST00000302538 KIAA0586Q9BVV6 1533 aa16.56■□□□□ 0.24
ABR-202ENST00000302538 ATF3P18847 181 aa16.55■□□□□ 0.24
ABR-202ENST00000302538 KIAA1211Q6ZU35 1233 aa16.55■□□□□ 0.24
ABR-202ENST00000302538 GOLGA6L4A6NEF3 574 aa16.55■□□□□ 0.24
ABR-202ENST00000302538 PSME1Q06323 249 aa16.55■□□□□ 0.24
ABR-202ENST00000302538 HDAC5Q9UQL6 1122 aa16.55■□□□□ 0.24
ABR-202ENST00000302538 C1orf141Q5JVX7 400 aa16.54■□□□□ 0.24
ABR-202ENST00000302538 ZNF644Q9H582 1327 aaPredicted RBP16.54■□□□□ 0.24
ABR-202ENST00000302538 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
ABR-202ENST00000302538 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
ABR-202ENST00000302538 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.54■□□□□ 0.24
ABR-202ENST00000302538 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
ABR-202ENST00000302538 FGD6Q6ZV73 1430 aa16.53■□□□□ 0.24
ABR-202ENST00000302538 TRIM44Q96DX7 344 aaPredicted RBP16.53■□□□□ 0.24
ABR-202ENST00000302538 ITPRIPQ8IWB1 547 aa16.52■□□□□ 0.24
ABR-202ENST00000302538 COG3Q96JB2 828 aa16.52■□□□□ 0.24
ABR-202ENST00000302538 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.23
ABR-202ENST00000302538 LRRC9Q6ZRR7 1453 aa16.52■□□□□ 0.23
ABR-202ENST00000302538 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.23
ABR-202ENST00000302538 ARAP1Q96P48 1450 aa16.52■□□□□ 0.23
ABR-202ENST00000302538 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.23
ABR-202ENST00000302538 FYCO1Q9BQS8 1478 aa16.51■□□□□ 0.23
ABR-202ENST00000302538 LMOD3Q0VAK6 560 aa16.51■□□□□ 0.23
ABR-202ENST00000302538 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
ABR-202ENST00000302538 MAGI1Q96QZ7 1491 aaPredicted RBP16.5■□□□□ 0.23
ABR-202ENST00000302538 CCDC144AA2RUR9 1427 aa16.49■□□□□ 0.23
ABR-202ENST00000302538 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.48■□□□□ 0.23
ABR-202ENST00000302538 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
ABR-202ENST00000302538 RALBP1Q15311 655 aa16.48■□□□□ 0.23
ABR-202ENST00000302538 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
ABR-202ENST00000302538 KIF15Q9NS87 1388 aa16.48■□□□□ 0.23
ABR-202ENST00000302538 GPATCH3Q96I76 525 aa16.47■□□□□ 0.23
ABR-202ENST00000302538 PHLDB1Q86UU1 1377 aa16.47■□□□□ 0.23
ABR-202ENST00000302538 TTC5Q8N0Z6 440 aa16.47■□□□□ 0.23
ABR-202ENST00000302538 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
ABR-202ENST00000302538 CFAP44Q96MT7 982 aa16.46■□□□□ 0.23
ABR-202ENST00000302538 GOLGA6L6A8MZA4 724 aa16.46■□□□□ 0.23
ABR-202ENST00000302538 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
ABR-202ENST00000302538 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
ABR-202ENST00000302538 TEFQ10587 303 aa16.45■□□□□ 0.22
ABR-202ENST00000302538 SMC4Q9NTJ3 1288 aa16.45■□□□□ 0.22
ABR-202ENST00000302538 PPP4R2Q9NY27 417 aa16.44■□□□□ 0.22
ABR-202ENST00000302538 GRIN2AQ12879 1464 aa16.44■□□□□ 0.22
ABR-202ENST00000302538 B4GALNT3Q6L9W6 998 aa16.44■□□□□ 0.22
ABR-202ENST00000302538 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
ABR-202ENST00000302538 TROQ12816 1431 aaPredicted RBP16.43■□□□□ 0.22
ABR-202ENST00000302538 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
ABR-202ENST00000302538 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
ABR-202ENST00000302538 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
ABR-202ENST00000302538 HMMRO75330 724 aa16.42■□□□□ 0.22
ABR-202ENST00000302538 NGEFQ8N5V2 710 aa16.42■□□□□ 0.22
ABR-202ENST00000302538 CUL7Q14999 1698 aa16.42■□□□□ 0.22
ABR-202ENST00000302538 IQGAP2Q13576 1575 aa16.41■□□□□ 0.22
ABR-202ENST00000302538 DNTTIP2Q5QJE6 756 aaKnown RBP16.4■□□□□ 0.22
ABR-202ENST00000302538 NRDCO43847 1150 aa16.4■□□□□ 0.22
ABR-202ENST00000302538 ANKRD50Q9ULJ7 1429 aa16.39■□□□□ 0.21
ABR-202ENST00000302538 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
ABR-202ENST00000302538 RWDD1Q9H446 243 aaPredicted RBP16.39■□□□□ 0.21
ABR-202ENST00000302538 DHX57Q6P158 1386 aaKnown RBP16.38■□□□□ 0.21
ABR-202ENST00000302538 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
ABR-202ENST00000302538 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
ABR-202ENST00000302538 HECW1Q76N89 1606 aa16.37■□□□□ 0.21
ABR-202ENST00000302538 PROSER2Q86WR7 435 aaPredicted RBP16.37■□□□□ 0.21
ABR-202ENST00000302538 PLEKHH2Q8IVE3 1493 aa16.36■□□□□ 0.21
ABR-202ENST00000302538 SF3B2Q13435 895 aaKnown RBP16.36■□□□□ 0.21
ABR-202ENST00000302538 FBXW7Q969H0 707 aa16.35■□□□□ 0.21
ABR-202ENST00000302538 EHBP1L1Q8N3D4 1523 aa16.35■□□□□ 0.21
ABR-202ENST00000302538 HSP90B1P14625 803 aaKnown RBP16.35■□□□□ 0.21
ABR-202ENST00000302538 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
ABR-202ENST00000302538 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
ABR-202ENST00000302538 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
ABR-202ENST00000302538 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
ABR-202ENST00000302538 NLRP2Q9NX02 1062 aa16.34■□□□□ 0.21
ABR-202ENST00000302538 EIF2S2P20042 333 aaKnown RBP16.34■□□□□ 0.21
ABR-202ENST00000302538 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
ABR-202ENST00000302538 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
ABR-202ENST00000302538 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.21
ABR-202ENST00000302538 NOL10Q9BSC4 688 aaKnown RBP16.33■□□□□ 0.21
ABR-202ENST00000302538 MIA2Q96PC5 1412 aa16.33■□□□□ 0.2
ABR-202ENST00000302538 ST20-MTHFSA0A0A6YYL1 179 aa16.33■□□□□ 0.2
ABR-202ENST00000302538 SPRYD3Q8NCJ5 442 aa16.33■□□□□ 0.2
ABR-202ENST00000302538 CCER2I3L3R5 266 aa16.32■□□□□ 0.2
ABR-202ENST00000302538 RASSF8Q8NHQ8 419 aa16.32■□□□□ 0.2
ABR-202ENST00000302538 RCAN3Q9UKA8 241 aa16.32■□□□□ 0.2
ABR-202ENST00000302538 MARCH6O60337 910 aa16.32■□□□□ 0.2
ABR-202ENST00000302538 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
ABR-202ENST00000302538 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
ABR-202ENST00000302538 PANK3Q9H999 370 aa16.32■□□□□ 0.2
ABR-202ENST00000302538 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
ABR-202ENST00000302538 CTDP1Q9Y5B0 961 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms