RNA–Protein interactions for RNA: ENST00000299853.9

POLR3E-201, Transcript of RNA polymerase III subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR3E, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-201ENST00000299853 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.28
POLR3E-201ENST00000299853 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
POLR3E-201ENST00000299853 ROCK2O75116 1388 aaKnown RBP16.76■□□□□ 0.27
POLR3E-201ENST00000299853 NBPF1Q3BBV0 1214 aa16.75■□□□□ 0.27
POLR3E-201ENST00000299853 PPP4R2Q9NY27 417 aa16.75■□□□□ 0.27
POLR3E-201ENST00000299853 IL27Q8NEV9 243 aa16.72■□□□□ 0.27
POLR3E-201ENST00000299853 ARHGAP5Q13017 1502 aa16.72■□□□□ 0.27
POLR3E-201ENST00000299853 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
POLR3E-201ENST00000299853 KDM5CP41229 1560 aa16.71■□□□□ 0.26
POLR3E-201ENST00000299853 CCDC144AA2RUR9 1427 aa16.7■□□□□ 0.26
POLR3E-201ENST00000299853 SYCP2Q9BX26 1530 aa16.7■□□□□ 0.26
POLR3E-201ENST00000299853 SHANK2Q9UPX8 1470 aa16.7■□□□□ 0.26
POLR3E-201ENST00000299853 DAXXQ9UER7 740 aaPredicted RBP16.69■□□□□ 0.26
POLR3E-201ENST00000299853 SAMD9LQ8IVG5 1584 aa16.69■□□□□ 0.26
POLR3E-201ENST00000299853 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
POLR3E-201ENST00000299853 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
POLR3E-201ENST00000299853 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
POLR3E-201ENST00000299853 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
POLR3E-201ENST00000299853 POLR1AO95602 1720 aaPredicted RBP16.67■□□□□ 0.26
POLR3E-201ENST00000299853 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
POLR3E-201ENST00000299853 FAM135AQ9P2D6 1515 aa16.67■□□□□ 0.26
POLR3E-201ENST00000299853 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
POLR3E-201ENST00000299853 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
POLR3E-201ENST00000299853 CDC42BPBQ9Y5S2 1711 aa16.66■□□□□ 0.26
POLR3E-201ENST00000299853 NEFMP07197 916 aa16.65■□□□□ 0.26
POLR3E-201ENST00000299853 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
POLR3E-201ENST00000299853 UHRF1BP1Q6BDS2 1440 aa16.65■□□□□ 0.26
POLR3E-201ENST00000299853 PLEKHH2Q8IVE3 1493 aa16.65■□□□□ 0.26
POLR3E-201ENST00000299853 SLC4A3P48751 1232 aa16.65■□□□□ 0.26
POLR3E-201ENST00000299853 CHD1O14646 1710 aa16.64■□□□□ 0.25
POLR3E-201ENST00000299853 TTC37Q6PGP7 1564 aa16.64■□□□□ 0.25
POLR3E-201ENST00000299853 RSPH4AQ5TD94 716 aa16.64■□□□□ 0.25
POLR3E-201ENST00000299853 ARID4BQ4LE39 1312 aaPredicted RBP16.62■□□□□ 0.25
POLR3E-201ENST00000299853 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
POLR3E-201ENST00000299853 AFAP1Q8N556 730 aa16.6■□□□□ 0.25
POLR3E-201ENST00000299853 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
POLR3E-201ENST00000299853 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
POLR3E-201ENST00000299853 PREX2Q70Z35 1606 aa16.6■□□□□ 0.25
POLR3E-201ENST00000299853 ERICH6BQ5W0A0 696 aa16.6■□□□□ 0.25
POLR3E-201ENST00000299853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
POLR3E-201ENST00000299853 PRAG1Q86YV5 1406 aa16.58■□□□□ 0.25
POLR3E-201ENST00000299853 FANCIQ9NVI1 1328 aa16.58■□□□□ 0.25
POLR3E-201ENST00000299853 EFCAB2Q5VUJ9 269 aa16.58■□□□□ 0.24
POLR3E-201ENST00000299853 KDM5DQ9BY66 1539 aa16.58■□□□□ 0.24
POLR3E-201ENST00000299853 RALBP1Q15311 655 aa16.58■□□□□ 0.24
POLR3E-201ENST00000299853 SMG6Q86US8 1419 aaKnown RBP16.58■□□□□ 0.24
POLR3E-201ENST00000299853 PLA2R1Q13018 1463 aa16.58■□□□□ 0.24
POLR3E-201ENST00000299853 PANK3Q9H999 370 aa16.57■□□□□ 0.24
POLR3E-201ENST00000299853 KTN1Q86UP2 1357 aaKnown RBP16.56■□□□□ 0.24
POLR3E-201ENST00000299853 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
POLR3E-201ENST00000299853 A2MP01023 1474 aa16.55■□□□□ 0.24
POLR3E-201ENST00000299853 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
POLR3E-201ENST00000299853 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
POLR3E-201ENST00000299853 SPAG9O60271 1321 aaKnown RBP16.53■□□□□ 0.24
POLR3E-201ENST00000299853 TRAPPC8Q9Y2L5 1435 aa16.52■□□□□ 0.24
POLR3E-201ENST00000299853 BRD4O60885 1362 aaPredicted RBP16.52■□□□□ 0.24
POLR3E-201ENST00000299853 PLIN1O60240 522 aa16.52■□□□□ 0.24
POLR3E-201ENST00000299853 TESK2Q96S53 571 aa16.52■□□□□ 0.23
POLR3E-201ENST00000299853 TMF1P82094 1093 aa16.51■□□□□ 0.23
POLR3E-201ENST00000299853 ABCC2Q92887 1545 aa16.51■□□□□ 0.23
POLR3E-201ENST00000299853 PER1O15534 1290 aaPredicted RBP16.5■□□□□ 0.23
POLR3E-201ENST00000299853 MYO5CQ9NQX4 1742 aa16.49■□□□□ 0.23
POLR3E-201ENST00000299853 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
POLR3E-201ENST00000299853 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
POLR3E-201ENST00000299853 KIF3BO15066 747 aa16.47■□□□□ 0.23
POLR3E-201ENST00000299853 IPO9Q96P70 1041 aaKnown RBP16.47■□□□□ 0.23
POLR3E-201ENST00000299853 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
POLR3E-201ENST00000299853 LRPPRCP42704 1394 aaKnown RBP16.47■□□□□ 0.23
POLR3E-201ENST00000299853 ERBINQ96RT1 1412 aa16.47■□□□□ 0.23
POLR3E-201ENST00000299853 PLCH2O75038 1416 aa16.47■□□□□ 0.23
POLR3E-201ENST00000299853 RGS3P49796 1198 aa16.46■□□□□ 0.23
POLR3E-201ENST00000299853 PARD3Q8TEW0 1356 aa16.45■□□□□ 0.22
POLR3E-201ENST00000299853 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
POLR3E-201ENST00000299853 DUOX2Q9NRD8 1548 aa16.44■□□□□ 0.22
POLR3E-201ENST00000299853 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
POLR3E-201ENST00000299853 UNC13BO14795 1591 aa16.44■□□□□ 0.22
POLR3E-201ENST00000299853 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
POLR3E-201ENST00000299853 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
POLR3E-201ENST00000299853 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
POLR3E-201ENST00000299853 ZCCHC11Q5TAX3 1644 aaKnown RBP16.42■□□□□ 0.22
POLR3E-201ENST00000299853 COL17A1Q9UMD9 1497 aaPredicted RBP16.42■□□□□ 0.22
POLR3E-201ENST00000299853 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
POLR3E-201ENST00000299853 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
POLR3E-201ENST00000299853 GPRASP1Q5JY77 1395 aa16.42■□□□□ 0.22
POLR3E-201ENST00000299853 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
POLR3E-201ENST00000299853 IQGAP3Q86VI3 1631 aa16.41■□□□□ 0.22
POLR3E-201ENST00000299853 MAST1Q9Y2H9 1570 aa16.4■□□□□ 0.22
POLR3E-201ENST00000299853 E9PCH4 1651 aa16.39■□□□□ 0.21
POLR3E-201ENST00000299853 SCAPERQ9BY12 1400 aa16.39■□□□□ 0.21
POLR3E-201ENST00000299853 PLXNC1O60486 1568 aa16.39■□□□□ 0.21
POLR3E-201ENST00000299853 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
POLR3E-201ENST00000299853 CFAP70Q5T0N1 1121 aa16.38■□□□□ 0.21
POLR3E-201ENST00000299853 PRDM15P57071 1507 aaPredicted RBP16.37■□□□□ 0.21
POLR3E-201ENST00000299853 ABCC1P33527 1531 aa16.37■□□□□ 0.21
POLR3E-201ENST00000299853 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
POLR3E-201ENST00000299853 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
POLR3E-201ENST00000299853 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
POLR3E-201ENST00000299853 KANK1Q14678 1352 aa16.33■□□□□ 0.21
POLR3E-201ENST00000299853 ATP10AO60312 1499 aa16.33■□□□□ 0.2
POLR3E-201ENST00000299853 MAGI2Q86UL8 1455 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms