RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 FAM135AQ9P2D6 1515 aa27.56■■■□□ 2
HPS6-201ENST00000299238 RTN4Q9NQC3 1192 aaKnown RBP27.56■■■□□ 2
HPS6-201ENST00000299238 ERICH6BQ5W0A0 696 aa27.54■■■□□ 2
HPS6-201ENST00000299238 PLXNC1O60486 1568 aa27.54■■■□□ 2
HPS6-201ENST00000299238 PLEKHH2Q8IVE3 1493 aa27.53■■■□□ 2
HPS6-201ENST00000299238 UNC13BO14795 1591 aa27.53■■■□□ 2
HPS6-201ENST00000299238 UHRF1BP1LA0JNW5 1464 aa27.53■■■□□ 2
HPS6-201ENST00000299238 UHRF1BP1Q6BDS2 1440 aa27.53■■■□□ 2
HPS6-201ENST00000299238 ZNF326Q5BKZ1 582 aaKnown RBP27.53■■■□□ 2
HPS6-201ENST00000299238 KDM5CP41229 1560 aa27.52■■■□□ 2
HPS6-201ENST00000299238 UBE2Q2Q8WVN8 375 aa27.52■■■□□ 2
HPS6-201ENST00000299238 CNGB1Q14028 1251 aaPredicted RBP27.51■■□□□ 1.99
HPS6-201ENST00000299238 USP47Q96K76 1375 aa27.51■■□□□ 1.99
HPS6-201ENST00000299238 RALGAPBQ86X10 1494 aa27.5■■□□□ 1.99
HPS6-201ENST00000299238 FAM9BQ8IZU0 186 aa27.5■■□□□ 1.99
HPS6-201ENST00000299238 BCORL1Q5H9F3 1711 aa27.49■■□□□ 1.99
HPS6-201ENST00000299238 PAK3O75914 559 aaPredicted RBP27.46■■□□□ 1.99
HPS6-201ENST00000299238 PLCH2O75038 1416 aa27.44■■□□□ 1.98
HPS6-201ENST00000299238 MRS2Q9HD23 443 aa27.44■■□□□ 1.98
HPS6-201ENST00000299238 POLR3GLQ9BT43 218 aa27.44■■□□□ 1.98
HPS6-201ENST00000299238 IQGAP3Q86VI3 1631 aa27.42■■□□□ 1.98
HPS6-201ENST00000299238 ABCC1P33527 1531 aa27.42■■□□□ 1.98
HPS6-201ENST00000299238 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
HPS6-201ENST00000299238 DHX29Q7Z478 1369 aaKnown RBP27.41■■□□□ 1.98
HPS6-201ENST00000299238 NOP58Q9Y2X3 529 aaKnown RBP27.4■■□□□ 1.98
HPS6-201ENST00000299238 CCDC144AA2RUR9 1427 aa27.36■■□□□ 1.97
HPS6-201ENST00000299238 MAGI2Q86UL8 1455 aa27.35■■□□□ 1.97
HPS6-201ENST00000299238 ERBINQ96RT1 1412 aa27.35■■□□□ 1.97
HPS6-201ENST00000299238 ARID4BQ4LE39 1312 aaPredicted RBP27.35■■□□□ 1.97
HPS6-201ENST00000299238 EFCAB2Q5VUJ9 269 aa27.34■■□□□ 1.97
HPS6-201ENST00000299238 KDM2AQ9Y2K7 1162 aa27.34■■□□□ 1.97
HPS6-201ENST00000299238 DCAF11Q8TEB1 546 aa27.34■■□□□ 1.97
HPS6-201ENST00000299238 CARD11Q9BXL7 1154 aa27.33■■□□□ 1.97
HPS6-201ENST00000299238 PLA2R1Q13018 1463 aa27.33■■□□□ 1.97
HPS6-201ENST00000299238 ZBED9Q6R2W3 1325 aa27.33■■□□□ 1.97
HPS6-201ENST00000299238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.33■■□□□ 1.97
HPS6-201ENST00000299238 TRAPPC8Q9Y2L5 1435 aa27.31■■□□□ 1.96
HPS6-201ENST00000299238 ARAP3Q8WWN8 1544 aa27.3■■□□□ 1.96
HPS6-201ENST00000299238 TRPM1Q7Z4N2 1603 aa27.3■■□□□ 1.96
HPS6-201ENST00000299238 PRAG1Q86YV5 1406 aa27.27■■□□□ 1.96
HPS6-201ENST00000299238 SENP3-EIF4A1A0A087X0R7 540 aa27.26■■□□□ 1.95
HPS6-201ENST00000299238 WDR7Q9Y4E6 1490 aa27.24■■□□□ 1.95
HPS6-201ENST00000299238 ROCK2O75116 1388 aaKnown RBP27.24■■□□□ 1.95
HPS6-201ENST00000299238 ZFYVE16Q7Z3T8 1539 aa27.24■■□□□ 1.95
HPS6-201ENST00000299238 A2MP01023 1474 aa27.24■■□□□ 1.95
HPS6-201ENST00000299238 ATP10AO60312 1499 aa27.22■■□□□ 1.95
HPS6-201ENST00000299238 ABCA9Q8IUA7 1624 aa27.2■■□□□ 1.95
HPS6-201ENST00000299238 ST20-MTHFSA0A0A6YYL1 179 aa27.2■■□□□ 1.94
HPS6-201ENST00000299238 RTL5Q5HYW3 569 aaPredicted RBP27.18■■□□□ 1.94
HPS6-201ENST00000299238 RGL3Q3MIN7 710 aa27.18■■□□□ 1.94
HPS6-201ENST00000299238 RTEL1-TNFRSF6BF6WH68 1400 aa27.17■■□□□ 1.94
HPS6-201ENST00000299238 E9PCH4 1651 aa27.17■■□□□ 1.94
HPS6-201ENST00000299238 SPAG9O60271 1321 aaKnown RBP27.17■■□□□ 1.94
HPS6-201ENST00000299238 LAMC1P11047 1609 aa27.16■■□□□ 1.94
HPS6-201ENST00000299238 EIF2AK4Q9P2K8 1649 aaKnown RBP27.15■■□□□ 1.94
HPS6-201ENST00000299238 B4GALNT3Q6L9W6 998 aa27.15■■□□□ 1.94
HPS6-201ENST00000299238 FANCAO15360 1455 aa27.14■■□□□ 1.93
HPS6-201ENST00000299238 INO80Q9ULG1 1556 aaPredicted RBP27.13■■□□□ 1.93
HPS6-201ENST00000299238 AFAP1Q8N556 730 aa27.13■■□□□ 1.93
HPS6-201ENST00000299238 GPRASP1Q5JY77 1395 aa27.13■■□□□ 1.93
HPS6-201ENST00000299238 DEPDC5O75140 1603 aa27.13■■□□□ 1.93
HPS6-201ENST00000299238 PPP4R2Q9NY27 417 aa27.12■■□□□ 1.93
HPS6-201ENST00000299238 PRDM15P57071 1507 aaPredicted RBP27.11■■□□□ 1.93
HPS6-201ENST00000299238 ATP7AQ04656 1500 aa27.11■■□□□ 1.93
HPS6-201ENST00000299238 SMG6Q86US8 1419 aaKnown RBP27.08■■□□□ 1.93
HPS6-201ENST00000299238 NBPF1Q3BBV0 1214 aa27.08■■□□□ 1.93
HPS6-201ENST00000299238 SPHKAPQ2M3C7 1700 aa27.07■■□□□ 1.92
HPS6-201ENST00000299238 PNISRQ8TF01 805 aaKnown RBP27.06■■□□□ 1.92
HPS6-201ENST00000299238 RNF17Q9BXT8 1623 aaKnown RBP27.06■■□□□ 1.92
HPS6-201ENST00000299238 ASXL2Q76L83 1435 aa27.06■■□□□ 1.92
HPS6-201ENST00000299238 TRPM2O94759 1503 aa27.05■■□□□ 1.92
HPS6-201ENST00000299238 ADGRL1O94910 1474 aa27.05■■□□□ 1.92
HPS6-201ENST00000299238 TET3O43151 1660 aa27.04■■□□□ 1.92
HPS6-201ENST00000299238 CEP152O94986 1710 aa27.04■■□□□ 1.92
HPS6-201ENST00000299238 EIF5BO60841 1220 aaKnown RBP27.03■■□□□ 1.92
HPS6-201ENST00000299238 KTN1Q86UP2 1357 aaKnown RBP27.02■■□□□ 1.92
HPS6-201ENST00000299238 COL17A1Q9UMD9 1497 aaPredicted RBP27.01■■□□□ 1.91
HPS6-201ENST00000299238 VWDEQ8N2E2 1590 aa27■■□□□ 1.91
HPS6-201ENST00000299238 SCAPERQ9BY12 1400 aa27■■□□□ 1.91
HPS6-201ENST00000299238 MADDQ8WXG6 1647 aa26.99■■□□□ 1.91
HPS6-201ENST00000299238 TMC1Q8TDI8 760 aa26.99■■□□□ 1.91
HPS6-201ENST00000299238 CLTCL1P53675 1640 aa26.99■■□□□ 1.91
HPS6-201ENST00000299238 LRPPRCP42704 1394 aaKnown RBP26.99■■□□□ 1.91
HPS6-201ENST00000299238 BRD4O60885 1362 aaPredicted RBP26.98■■□□□ 1.91
HPS6-201ENST00000299238 PTPRTO14522 1441 aa26.97■■□□□ 1.91
HPS6-201ENST00000299238 MYBBP1AQ9BQG0 1328 aaKnown RBP26.97■■□□□ 1.91
HPS6-201ENST00000299238 NUDCQ9Y266 331 aa26.97■■□□□ 1.91
HPS6-201ENST00000299238 RALBP1Q15311 655 aa26.97■■□□□ 1.91
HPS6-201ENST00000299238 IPO9Q96P70 1041 aaKnown RBP26.97■■□□□ 1.91
HPS6-201ENST00000299238 MROH1Q8NDA8 1641 aa26.95■■□□□ 1.9
HPS6-201ENST00000299238 RNF123Q5XPI4 1314 aa26.94■■□□□ 1.9
HPS6-201ENST00000299238 KANK1Q14678 1352 aa26.93■■□□□ 1.9
HPS6-201ENST00000299238 DISP3Q9P2K9 1392 aa26.93■■□□□ 1.9
HPS6-201ENST00000299238 ZBTB47Q9UFB7 747 aaPredicted RBP26.93■■□□□ 1.9
HPS6-201ENST00000299238 TESK2Q96S53 571 aa26.93■■□□□ 1.9
HPS6-201ENST00000299238 KIDINS220Q9ULH0 1771 aa26.92■■□□□ 1.9
HPS6-201ENST00000299238 IQGAP1P46940 1657 aa26.91■■□□□ 1.9
HPS6-201ENST00000299238 PARD3Q8TEW0 1356 aa26.9■■□□□ 1.9
HPS6-201ENST00000299238 ANP32AP39687 249 aaKnown RBP26.9■■□□□ 1.9
HPS6-201ENST00000299238 KIF3BO15066 747 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms