RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 EIF2AK4Q9P2K8 1649 aaKnown RBP31.59■■■□□ 2.65
CCDC7-201ENST00000277657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.58■■■□□ 2.65
CCDC7-201ENST00000277657 DHX29Q7Z478 1369 aaKnown RBP31.58■■■□□ 2.65
CCDC7-201ENST00000277657 HECW2Q9P2P5 1572 aa31.54■■■□□ 2.64
CCDC7-201ENST00000277657 FAM69CQ0P6D2 419 aa31.52■■■□□ 2.64
CCDC7-201ENST00000277657 MYT1LQ9UL68 1186 aa31.52■■■□□ 2.64
CCDC7-201ENST00000277657 VWDEQ8N2E2 1590 aa31.49■■■□□ 2.63
CCDC7-201ENST00000277657 RICTORQ6R327 1708 aa31.48■■■□□ 2.63
CCDC7-201ENST00000277657 PLA2R1Q13018 1463 aa31.48■■■□□ 2.63
CCDC7-201ENST00000277657 ATP10AO60312 1499 aa31.47■■■□□ 2.63
CCDC7-201ENST00000277657 A2MP01023 1474 aa31.47■■■□□ 2.63
CCDC7-201ENST00000277657 PRDM15P57071 1507 aaPredicted RBP31.46■■■□□ 2.63
CCDC7-201ENST00000277657 MROH1Q8NDA8 1641 aa31.45■■■□□ 2.63
CCDC7-201ENST00000277657 PPRC1Q5VV67 1664 aaKnown RBP31.44■■■□□ 2.62
CCDC7-201ENST00000277657 ABCA6Q8N139 1617 aa31.43■■■□□ 2.62
CCDC7-201ENST00000277657 KIF3BO15066 747 aa31.42■■■□□ 2.62
CCDC7-201ENST00000277657 RAPGEF3O95398 923 aa31.42■■■□□ 2.62
CCDC7-201ENST00000277657 FRMPD1Q5SYB0 1578 aa31.42■■■□□ 2.62
CCDC7-201ENST00000277657 TET3O43151 1660 aa31.41■■■□□ 2.62
CCDC7-201ENST00000277657 CCDC144AA2RUR9 1427 aa31.41■■■□□ 2.62
CCDC7-201ENST00000277657 RNF17Q9BXT8 1623 aaKnown RBP31.4■■■□□ 2.62
CCDC7-201ENST00000277657 E9PCH4 1651 aa31.4■■■□□ 2.62
CCDC7-201ENST00000277657 NBPF8Q3BBV2 869 aa31.4■■■□□ 2.62
CCDC7-201ENST00000277657 KANK1Q14678 1352 aa31.39■■■□□ 2.62
CCDC7-201ENST00000277657 BCORL1Q5H9F3 1711 aa31.39■■■□□ 2.62
CCDC7-201ENST00000277657 KIF13AQ9H1H9 1805 aa31.36■■■□□ 2.61
CCDC7-201ENST00000277657 TSPOAP1O95153 1857 aa31.36■■■□□ 2.61
CCDC7-201ENST00000277657 DIP2CQ9Y2E4 1556 aa31.34■■■□□ 2.61
CCDC7-201ENST00000277657 UHRF1BP1Q6BDS2 1440 aa31.33■■■□□ 2.61
CCDC7-201ENST00000277657 ZMYM4Q5VZL5 1548 aa31.32■■■□□ 2.6
CCDC7-201ENST00000277657 PTPRTO14522 1441 aa31.3■■■□□ 2.6
CCDC7-201ENST00000277657 LMTK2Q8IWU2 1503 aa31.3■■■□□ 2.6
CCDC7-201ENST00000277657 TRPM2O94759 1503 aa31.29■■■□□ 2.6
CCDC7-201ENST00000277657 HIRIP3Q9BW71 556 aaPredicted RBP31.28■■■□□ 2.6
CCDC7-201ENST00000277657 SPHKAPQ2M3C7 1700 aa31.28■■■□□ 2.6
CCDC7-201ENST00000277657 EFCAB6Q5THR3 1501 aa31.25■■■□□ 2.59
CCDC7-201ENST00000277657 EIF4G2P78344 907 aaKnown RBP eCLIP31.24■■■□□ 2.59
CCDC7-201ENST00000277657 YEATS2Q9ULM3 1422 aa31.24■■■□□ 2.59
CCDC7-201ENST00000277657 HSPA5P11021 654 aaKnown RBP31.23■■■□□ 2.59
CCDC7-201ENST00000277657 MIER1Q8N108 512 aa31.23■■■□□ 2.59
CCDC7-201ENST00000277657 CEP152O94986 1710 aa31.21■■■□□ 2.59
CCDC7-201ENST00000277657 DCAF11Q8TEB1 546 aa31.19■■■□□ 2.58
CCDC7-201ENST00000277657 RALGAPBQ86X10 1494 aa31.19■■■□□ 2.58
CCDC7-201ENST00000277657 SPATA31E1Q6ZUB1 1445 aa31.18■■■□□ 2.58
CCDC7-201ENST00000277657 CLTCL1P53675 1640 aa31.16■■■□□ 2.58
CCDC7-201ENST00000277657 ZNF326Q5BKZ1 582 aaKnown RBP31.14■■■□□ 2.58
CCDC7-201ENST00000277657 ABCC3O15438 1527 aa31.13■■■□□ 2.57
CCDC7-201ENST00000277657 GGT6Q6P531 493 aa31.13■■■□□ 2.57
CCDC7-201ENST00000277657 KDM2AQ9Y2K7 1162 aa31.12■■■□□ 2.57
CCDC7-201ENST00000277657 RGL3Q3MIN7 710 aa31.12■■■□□ 2.57
CCDC7-201ENST00000277657 PRAG1Q86YV5 1406 aa31.11■■■□□ 2.57
CCDC7-201ENST00000277657 REREQ9P2R6 1566 aa31.1■■■□□ 2.57
CCDC7-201ENST00000277657 DDX10Q13206 875 aaKnown RBP31.1■■■□□ 2.57
CCDC7-201ENST00000277657 NEURL4Q96JN8 1562 aa31.1■■■□□ 2.57
CCDC7-201ENST00000277657 COL17A1Q9UMD9 1497 aaPredicted RBP31.07■■■□□ 2.56
CCDC7-201ENST00000277657 NPATQ14207 1427 aa31.07■■■□□ 2.56
CCDC7-201ENST00000277657 TRPM1Q7Z4N2 1603 aa31.06■■■□□ 2.56
CCDC7-201ENST00000277657 ZC3H13Q5T200 1668 aaKnown RBP31.06■■■□□ 2.56
CCDC7-201ENST00000277657 WASHC2CQ9Y4E1 1318 aa31.06■■■□□ 2.56
CCDC7-201ENST00000277657 CAMSAP1Q5T5Y3 1602 aa31.05■■■□□ 2.56
CCDC7-201ENST00000277657 USP47Q96K76 1375 aa31.03■■■□□ 2.56
CCDC7-201ENST00000277657 WASHC2AQ641Q2 1341 aa31.02■■■□□ 2.56
CCDC7-201ENST00000277657 AGLP35573 1532 aa31.01■■■□□ 2.56
CCDC7-201ENST00000277657 UGGT1Q9NYU2 1555 aa31■■■□□ 2.55
CCDC7-201ENST00000277657 ARHGAP31Q2M1Z3 1444 aa30.99■■■□□ 2.55
CCDC7-201ENST00000277657 POLR1AO95602 1720 aaPredicted RBP30.98■■■□□ 2.55
CCDC7-201ENST00000277657 STAC3Q96MF2 364 aa30.98■■■□□ 2.55
CCDC7-201ENST00000277657 CNTLNQ9NXG0 1405 aa30.98■■■□□ 2.55
CCDC7-201ENST00000277657 CARD11Q9BXL7 1154 aa30.97■■■□□ 2.55
CCDC7-201ENST00000277657 KIF1BO60333 1816 aa30.97■■■□□ 2.55
CCDC7-201ENST00000277657 ARHGEF40Q8TER5 1519 aa30.97■■■□□ 2.55
CCDC7-201ENST00000277657 GPRASP1Q5JY77 1395 aa30.96■■■□□ 2.55
CCDC7-201ENST00000277657 ROCK2O75116 1388 aaKnown RBP30.95■■■□□ 2.55
CCDC7-201ENST00000277657 LAMC1P11047 1609 aa30.95■■■□□ 2.55
CCDC7-201ENST00000277657 C11orf95C9JLR9 678 aaPredicted RBP30.94■■■□□ 2.54
CCDC7-201ENST00000277657 NOS1P29475 1434 aa30.94■■■□□ 2.54
CCDC7-201ENST00000277657 MADDQ8WXG6 1647 aa30.93■■■□□ 2.54
CCDC7-201ENST00000277657 CCDC7Q96M83 1385 aa30.93■■■□□ 2.54
CCDC7-201ENST00000277657 SIGLEC1Q9BZZ2 1709 aa30.93■■■□□ 2.54
CCDC7-201ENST00000277657 CFAP65Q6ZU64 1925 aaKnown RBP30.91■■■□□ 2.54
CCDC7-201ENST00000277657 ADGRB3O60242 1522 aa30.89■■■□□ 2.54
CCDC7-201ENST00000277657 MROH2AA6NES4 1674 aa30.88■■■□□ 2.53
CCDC7-201ENST00000277657 PPP6R1Q9UPN7 881 aa30.87■■■□□ 2.53
CCDC7-201ENST00000277657 IFT172Q9UG01 1749 aa30.86■■■□□ 2.53
CCDC7-201ENST00000277657 PIK3C2BO00750 1634 aa30.86■■■□□ 2.53
CCDC7-201ENST00000277657 NBPF1Q3BBV0 1214 aa30.86■■■□□ 2.53
CCDC7-201ENST00000277657 SYNMO15061 1565 aa30.85■■■□□ 2.53
CCDC7-201ENST00000277657 KIF7Q2M1P5 1343 aa30.85■■■□□ 2.53
CCDC7-201ENST00000277657 MYOM2P54296 1465 aa30.85■■■□□ 2.53
CCDC7-201ENST00000277657 ARID4BQ4LE39 1312 aaPredicted RBP30.81■■■□□ 2.52
CCDC7-201ENST00000277657 ST20-MTHFSA0A0A6YYL1 179 aa30.79■■■□□ 2.52
CCDC7-201ENST00000277657 KIAA1210Q9ULL0 1709 aa30.79■■■□□ 2.52
CCDC7-201ENST00000277657 PREX1Q8TCU6 1659 aa30.79■■■□□ 2.52
CCDC7-201ENST00000277657 NRXN1Q9ULB1 1477 aa30.76■■■□□ 2.51
CCDC7-201ENST00000277657 ANP32CO43423 234 aa30.74■■■□□ 2.51
CCDC7-201ENST00000277657 PPLO60437 1756 aa30.73■■■□□ 2.51
CCDC7-201ENST00000277657 CLTCQ00610 1675 aaKnown RBP30.73■■■□□ 2.51
CCDC7-201ENST00000277657 SLC52A1Q9NWF4 448 aa30.72■■■□□ 2.51
CCDC7-201ENST00000277657 RPGRIP1LQ68CZ1 1315 aa30.71■■■□□ 2.51
CCDC7-201ENST00000277657 IQGAP1P46940 1657 aa30.7■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms