RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 FYCO1Q9BQS8 1478 aa19.98■□□□□ 0.79
MRPS28-201ENST00000276585 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
MRPS28-201ENST00000276585 HNRNPMP52272 730 aaKnown RBP eCLIP19.97■□□□□ 0.79
MRPS28-201ENST00000276585 THEMISQ8N1K5 641 aaPredicted RBP19.97■□□□□ 0.79
MRPS28-201ENST00000276585 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
MRPS28-201ENST00000276585 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
MRPS28-201ENST00000276585 FBXO31Q5XUX0 539 aaPredicted RBP19.95■□□□□ 0.78
MRPS28-201ENST00000276585 SYNMO15061 1565 aa19.94■□□□□ 0.78
MRPS28-201ENST00000276585 MED14O60244 1454 aa19.93■□□□□ 0.78
MRPS28-201ENST00000276585 FAM135AQ9P2D6 1515 aa19.92■□□□□ 0.78
MRPS28-201ENST00000276585 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
MRPS28-201ENST00000276585 CDC42BPAQ5VT25 1732 aa19.91■□□□□ 0.78
MRPS28-201ENST00000276585 STRCP1A6NGW2 1772 aa19.91■□□□□ 0.78
MRPS28-201ENST00000276585 DEPDC5O75140 1603 aa19.91■□□□□ 0.78
MRPS28-201ENST00000276585 INO80Q9ULG1 1556 aaPredicted RBP19.9■□□□□ 0.78
MRPS28-201ENST00000276585 CEP162Q5TB80 1403 aa19.89■□□□□ 0.77
MRPS28-201ENST00000276585 UGGT1Q9NYU2 1555 aa19.89■□□□□ 0.77
MRPS28-201ENST00000276585 UPF1Q92900 1129 aaKnown RBP eCLIP19.88■□□□□ 0.77
MRPS28-201ENST00000276585 PZPP20742 1482 aa19.86■□□□□ 0.77
MRPS28-201ENST00000276585 NLRP1Q9C000 1473 aa19.85■□□□□ 0.77
MRPS28-201ENST00000276585 MIA2Q96PC5 1412 aa19.84■□□□□ 0.77
MRPS28-201ENST00000276585 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.76
MRPS28-201ENST00000276585 FAM135BQ49AJ0 1406 aa19.83■□□□□ 0.76
MRPS28-201ENST00000276585 KIAA1107Q9UPP5 1409 aa19.83■□□□□ 0.76
MRPS28-201ENST00000276585 PLEKHH2Q8IVE3 1493 aa19.82■□□□□ 0.76
MRPS28-201ENST00000276585 GPATCH8Q9UKJ3 1502 aaKnown RBP19.81■□□□□ 0.76
MRPS28-201ENST00000276585 CFDP1Q9UEE9 299 aaPredicted RBP19.8■□□□□ 0.76
MRPS28-201ENST00000276585 KDM5DQ9BY66 1539 aa19.8■□□□□ 0.76
MRPS28-201ENST00000276585 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
MRPS28-201ENST00000276585 KIF3BO15066 747 aa19.79■□□□□ 0.76
MRPS28-201ENST00000276585 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
MRPS28-201ENST00000276585 SRCAPQ6ZRS2 3230 aa19.78■□□□□ 0.76
MRPS28-201ENST00000276585 DHX29Q7Z478 1369 aaKnown RBP19.76■□□□□ 0.75
MRPS28-201ENST00000276585 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
MRPS28-201ENST00000276585 EHBP1L1Q8N3D4 1523 aa19.72■□□□□ 0.75
MRPS28-201ENST00000276585 ZC3H13Q5T200 1668 aaKnown RBP19.72■□□□□ 0.75
MRPS28-201ENST00000276585 ROBO1Q9Y6N7 1651 aa19.72■□□□□ 0.75
MRPS28-201ENST00000276585 XIRP1Q702N8 1843 aaKnown RBP19.72■□□□□ 0.75
MRPS28-201ENST00000276585 FOXD1Q16676 465 aa19.71■□□□□ 0.75
MRPS28-201ENST00000276585 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
MRPS28-201ENST00000276585 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
MRPS28-201ENST00000276585 JCADQ9P266 1359 aa19.7■□□□□ 0.74
MRPS28-201ENST00000276585 SCAF11Q99590 1463 aaKnown RBP19.69■□□□□ 0.74
MRPS28-201ENST00000276585 MEX3CQ5U5Q3 659 aaKnown RBP19.69■□□□□ 0.74
MRPS28-201ENST00000276585 ZNF772Q68DY9 489 aaPredicted RBP19.69■□□□□ 0.74
MRPS28-201ENST00000276585 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
MRPS28-201ENST00000276585 RTEL1-TNFRSF6BF6WH68 1400 aa19.68■□□□□ 0.74
MRPS28-201ENST00000276585 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
MRPS28-201ENST00000276585 TXNDC2Q86VQ3 553 aa19.65■□□□□ 0.74
MRPS28-201ENST00000276585 ZNF644Q9H582 1327 aaPredicted RBP19.65■□□□□ 0.74
MRPS28-201ENST00000276585 MTUS2Q5JR59 1369 aa19.65■□□□□ 0.74
MRPS28-201ENST00000276585 LRRC9Q6ZRR7 1453 aa19.65■□□□□ 0.74
MRPS28-201ENST00000276585 RXRBP28702 533 aa19.63■□□□□ 0.73
MRPS28-201ENST00000276585 LTKP29376 864 aa19.63■□□□□ 0.73
MRPS28-201ENST00000276585 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
MRPS28-201ENST00000276585 MBD5Q9P267 1494 aa19.61■□□□□ 0.73
MRPS28-201ENST00000276585 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
MRPS28-201ENST00000276585 RBM33Q96EV2 1170 aaKnown RBP19.61■□□□□ 0.73
MRPS28-201ENST00000276585 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
MRPS28-201ENST00000276585 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
MRPS28-201ENST00000276585 LRP6O75581 1613 aa19.58■□□□□ 0.73
MRPS28-201ENST00000276585 UBR1Q8IWV7 1749 aa19.58■□□□□ 0.72
MRPS28-201ENST00000276585 SPATA31A6Q5VVP1 1343 aa19.57■□□□□ 0.72
MRPS28-201ENST00000276585 MAP3K1Q13233 1512 aa19.57■□□□□ 0.72
MRPS28-201ENST00000276585 NCOA2Q15596 1464 aa19.57■□□□□ 0.72
MRPS28-201ENST00000276585 MSH6P52701 1360 aa19.56■□□□□ 0.72
MRPS28-201ENST00000276585 ARHGAP23Q9P227 1491 aa19.55■□□□□ 0.72
MRPS28-201ENST00000276585 KCNA6P17658 529 aa19.55■□□□□ 0.72
MRPS28-201ENST00000276585 SLAIN2Q9P270 581 aa19.55■□□□□ 0.72
MRPS28-201ENST00000276585 SLIT1O75093 1534 aa19.55■□□□□ 0.72
MRPS28-201ENST00000276585 ABCC3O15438 1527 aa19.54■□□□□ 0.72
MRPS28-201ENST00000276585 CDK12Q9NYV4 1490 aaPredicted RBP19.54■□□□□ 0.72
MRPS28-201ENST00000276585 CCDC141Q6ZP82 1450 aa19.53■□□□□ 0.72
MRPS28-201ENST00000276585 COL16A1Q07092 1604 aaPredicted RBP19.51■□□□□ 0.71
MRPS28-201ENST00000276585 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
MRPS28-201ENST00000276585 PRDM15P57071 1507 aaPredicted RBP19.5■□□□□ 0.71
MRPS28-201ENST00000276585 SLC26A8Q96RN1 970 aa19.48■□□□□ 0.71
MRPS28-201ENST00000276585 STAG3Q9UJ98 1225 aa19.48■□□□□ 0.71
MRPS28-201ENST00000276585 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
MRPS28-201ENST00000276585 NUTM2BA6NNL0 878 aaPredicted RBP19.47■□□□□ 0.71
MRPS28-201ENST00000276585 NUTM2EB1AL46 878 aaPredicted RBP19.47■□□□□ 0.71
MRPS28-201ENST00000276585 NUTM2DQ5VT03 806 aaPredicted RBP19.47■□□□□ 0.71
MRPS28-201ENST00000276585 NUTM2AQ8IVF1 878 aaPredicted RBP19.47■□□□□ 0.71
MRPS28-201ENST00000276585 ZRANB1Q9UGI0 708 aa19.47■□□□□ 0.71
MRPS28-201ENST00000276585 CFAP65Q6ZU64 1925 aaKnown RBP19.47■□□□□ 0.71
MRPS28-201ENST00000276585 NKTRP30414 1462 aaKnown RBP19.46■□□□□ 0.71
MRPS28-201ENST00000276585 TMEM2Q9UHN6 1383 aa19.45■□□□□ 0.7
MRPS28-201ENST00000276585 KANK4Q5T7N3 995 aaPredicted RBP19.45■□□□□ 0.7
MRPS28-201ENST00000276585 RSPH4AQ5TD94 716 aa19.44■□□□□ 0.7
MRPS28-201ENST00000276585 AFF2P51816 1311 aa19.44■□□□□ 0.7
MRPS28-201ENST00000276585 RGS12O14924 1447 aa19.43■□□□□ 0.7
MRPS28-201ENST00000276585 TSPY4P0CV99 314 aa19.43■□□□□ 0.7
MRPS28-201ENST00000276585 TSPY10P0CW01 314 aa19.43■□□□□ 0.7
MRPS28-201ENST00000276585 ARHGEF5Q12774 1597 aa19.43■□□□□ 0.7
MRPS28-201ENST00000276585 BCANQ96GW7 911 aa19.42■□□□□ 0.7
MRPS28-201ENST00000276585 SHPRHQ149N8 1683 aa19.41■□□□□ 0.7
MRPS28-201ENST00000276585 CEP152O94986 1710 aa19.4■□□□□ 0.7
MRPS28-201ENST00000276585 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
MRPS28-201ENST00000276585 PIK3C2BO00750 1634 aa19.38■□□□□ 0.69
MRPS28-201ENST00000276585 RBM6P78332 1123 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms