RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 CDCA7LQ96GN5 454 aa22.63■■□□□ 1.21
RTN1-201ENST00000267484 IPO9Q96P70 1041 aaKnown RBP22.62■■□□□ 1.21
RTN1-201ENST00000267484 BRD4O60885 1362 aaPredicted RBP22.62■■□□□ 1.21
RTN1-201ENST00000267484 RALBP1Q15311 655 aa22.62■■□□□ 1.21
RTN1-201ENST00000267484 RCAN3Q9UKA8 241 aa22.61■■□□□ 1.21
RTN1-201ENST00000267484 CC2D1BQ5T0F9 858 aaKnown RBP22.61■■□□□ 1.21
RTN1-201ENST00000267484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.61■■□□□ 1.21
RTN1-201ENST00000267484 CDC42BPAQ5VT25 1732 aa22.6■■□□□ 1.21
RTN1-201ENST00000267484 CARMIL2Q6F5E8 1435 aa22.6■■□□□ 1.21
RTN1-201ENST00000267484 ADCY10Q96PN6 1610 aa22.6■■□□□ 1.21
RTN1-201ENST00000267484 ATP10BO94823 1461 aa22.59■■□□□ 1.21
RTN1-201ENST00000267484 PLIN1O60240 522 aa22.58■■□□□ 1.21
RTN1-201ENST00000267484 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.21
RTN1-201ENST00000267484 ZBTB47Q9UFB7 747 aaPredicted RBP22.58■■□□□ 1.2
RTN1-201ENST00000267484 ABCC10Q5T3U5 1492 aa22.58■■□□□ 1.2
RTN1-201ENST00000267484 SKAP1Q86WV1 359 aa22.57■■□□□ 1.2
RTN1-201ENST00000267484 ARHGEF12Q9NZN5 1544 aa22.56■■□□□ 1.2
RTN1-201ENST00000267484 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
RTN1-201ENST00000267484 NLRP13Q86W25 1043 aa22.55■■□□□ 1.2
RTN1-201ENST00000267484 KTN1Q86UP2 1357 aaKnown RBP22.54■■□□□ 1.2
RTN1-201ENST00000267484 PER1O15534 1290 aaPredicted RBP22.52■■□□□ 1.2
RTN1-201ENST00000267484 SHANK2Q9UPX8 1470 aa22.51■■□□□ 1.19
RTN1-201ENST00000267484 MYT1LQ9UL68 1186 aa22.51■■□□□ 1.19
RTN1-201ENST00000267484 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
RTN1-201ENST00000267484 PARD3Q8TEW0 1356 aa22.5■■□□□ 1.19
RTN1-201ENST00000267484 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
RTN1-201ENST00000267484 PTPRGP23470 1445 aa22.49■■□□□ 1.19
RTN1-201ENST00000267484 DISP3Q9P2K9 1392 aa22.49■■□□□ 1.19
RTN1-201ENST00000267484 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
RTN1-201ENST00000267484 ABCA8O94911 1581 aa22.48■■□□□ 1.19
RTN1-201ENST00000267484 PANK3Q9H999 370 aa22.48■■□□□ 1.19
RTN1-201ENST00000267484 FAM135AQ9P2D6 1515 aa22.48■■□□□ 1.19
RTN1-201ENST00000267484 KDM5DQ9BY66 1539 aa22.47■■□□□ 1.19
RTN1-201ENST00000267484 E9PCH4 1651 aa22.47■■□□□ 1.19
RTN1-201ENST00000267484 PDE4AP27815 886 aa22.47■■□□□ 1.19
RTN1-201ENST00000267484 NUP160Q12769 1436 aa22.46■■□□□ 1.19
RTN1-201ENST00000267484 LAS1LQ9Y4W2 734 aaKnown RBP22.45■■□□□ 1.18
RTN1-201ENST00000267484 TESK2Q96S53 571 aa22.44■■□□□ 1.18
RTN1-201ENST00000267484 RTL5Q5HYW3 569 aaPredicted RBP22.44■■□□□ 1.18
RTN1-201ENST00000267484 CRBNQ96SW2 442 aa22.42■■□□□ 1.18
RTN1-201ENST00000267484 PLA2R1Q13018 1463 aa22.42■■□□□ 1.18
RTN1-201ENST00000267484 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
RTN1-201ENST00000267484 CCDC141Q6ZP82 1450 aa22.41■■□□□ 1.18
RTN1-201ENST00000267484 TRPM1Q7Z4N2 1603 aa22.41■■□□□ 1.18
RTN1-201ENST00000267484 A2MP01023 1474 aa22.4■■□□□ 1.18
RTN1-201ENST00000267484 PDE3BQ13370 1112 aa22.4■■□□□ 1.18
RTN1-201ENST00000267484 SAMD9LQ8IVG5 1584 aa22.4■■□□□ 1.18
RTN1-201ENST00000267484 C20orf194Q5TEA3 1177 aa22.4■■□□□ 1.18
RTN1-201ENST00000267484 BACH2Q9BYV9 841 aa22.39■■□□□ 1.17
RTN1-201ENST00000267484 ADAMTS8Q9UP79 889 aa22.36■■□□□ 1.17
RTN1-201ENST00000267484 COL17A1Q9UMD9 1497 aaPredicted RBP22.35■■□□□ 1.17
RTN1-201ENST00000267484 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
RTN1-201ENST00000267484 SYCP2Q9BX26 1530 aa22.35■■□□□ 1.17
RTN1-201ENST00000267484 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
RTN1-201ENST00000267484 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
RTN1-201ENST00000267484 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
RTN1-201ENST00000267484 TMF1P82094 1093 aa22.33■■□□□ 1.17
RTN1-201ENST00000267484 GPRASP1Q5JY77 1395 aa22.32■■□□□ 1.16
RTN1-201ENST00000267484 NEFMP07197 916 aa22.29■■□□□ 1.16
RTN1-201ENST00000267484 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
RTN1-201ENST00000267484 BLMP54132 1417 aaPredicted RBP22.29■■□□□ 1.16
RTN1-201ENST00000267484 PRDM15P57071 1507 aaPredicted RBP22.27■■□□□ 1.16
RTN1-201ENST00000267484 MS4A1P11836 297 aa22.27■■□□□ 1.16
RTN1-201ENST00000267484 RSPH4AQ5TD94 716 aa22.27■■□□□ 1.16
RTN1-201ENST00000267484 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
RTN1-201ENST00000267484 SLC4A3P48751 1232 aa22.25■■□□□ 1.15
RTN1-201ENST00000267484 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
RTN1-201ENST00000267484 WASHC2CQ9Y4E1 1318 aa22.25■■□□□ 1.15
RTN1-201ENST00000267484 TTC37Q6PGP7 1564 aa22.24■■□□□ 1.15
RTN1-201ENST00000267484 PPP2R1AP30153 589 aa22.24■■□□□ 1.15
RTN1-201ENST00000267484 KNSTRNQ9Y448 316 aa22.24■■□□□ 1.15
RTN1-201ENST00000267484 MAGI2Q86UL8 1455 aa22.23■■□□□ 1.15
RTN1-201ENST00000267484 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
RTN1-201ENST00000267484 CCDC146Q8IYE0 955 aa22.22■■□□□ 1.15
RTN1-201ENST00000267484 MYO5CQ9NQX4 1742 aa22.22■■□□□ 1.15
RTN1-201ENST00000267484 DUSP27Q5VZP5 1158 aa22.2■■□□□ 1.14
RTN1-201ENST00000267484 UNC13BO14795 1591 aa22.19■■□□□ 1.14
RTN1-201ENST00000267484 ZMYM4Q5VZL5 1548 aa22.19■■□□□ 1.14
RTN1-201ENST00000267484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.18■■□□□ 1.14
RTN1-201ENST00000267484 IL27Q8NEV9 243 aa22.18■■□□□ 1.14
RTN1-201ENST00000267484 AMER1Q5JTC6 1135 aaPredicted RBP22.17■■□□□ 1.14
RTN1-201ENST00000267484 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
RTN1-201ENST00000267484 RTN4Q9NQC3 1192 aaKnown RBP22.16■■□□□ 1.14
RTN1-201ENST00000267484 KDM2BQ8NHM5 1336 aa22.15■■□□□ 1.14
RTN1-201ENST00000267484 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
RTN1-201ENST00000267484 RGS3P49796 1198 aa22.14■■□□□ 1.14
RTN1-201ENST00000267484 IQGAP3Q86VI3 1631 aa22.14■■□□□ 1.13
RTN1-201ENST00000267484 GOLGA2Q08379 1002 aa22.14■■□□□ 1.13
RTN1-201ENST00000267484 LAMC1P11047 1609 aa22.12■■□□□ 1.13
RTN1-201ENST00000267484 EIF2AK4Q9P2K8 1649 aaKnown RBP22.12■■□□□ 1.13
RTN1-201ENST00000267484 APAF1O14727 1248 aa22.1■■□□□ 1.13
RTN1-201ENST00000267484 INSRP06213 1382 aa22.1■■□□□ 1.13
RTN1-201ENST00000267484 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
RTN1-201ENST00000267484 ZNF521Q96K83 1311 aa22.09■■□□□ 1.13
RTN1-201ENST00000267484 BCAR3O75815 825 aa22.09■■□□□ 1.13
RTN1-201ENST00000267484 AFAP1Q8N556 730 aa22.09■■□□□ 1.13
RTN1-201ENST00000267484 CENPQQ7L2Z9 268 aaPredicted RBP22.08■■□□□ 1.13
RTN1-201ENST00000267484 ERCC6L2Q5T890 1561 aa22.08■■□□□ 1.13
RTN1-201ENST00000267484 DUOX2Q9NRD8 1548 aa22.08■■□□□ 1.13
RTN1-201ENST00000267484 PPM1GO15355 546 aaPredicted RBP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms