RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SKOR2Q2VWA4 1001 aaPredicted RBP18.89■□□□□ 0.62
CASC3-201ENST00000264645 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.62
CASC3-201ENST00000264645 RBM10P98175 930 aaKnown RBP18.89■□□□□ 0.61
CASC3-201ENST00000264645 BRD4O60885 1362 aaPredicted RBP18.89■□□□□ 0.61
CASC3-201ENST00000264645 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
CASC3-201ENST00000264645 RRP9O43818 475 aaKnown RBP18.89■□□□□ 0.61
CASC3-201ENST00000264645 CHMP4BQ9H444 224 aaKnown RBP18.89■□□□□ 0.61
CASC3-201ENST00000264645 R3HCC1Q9Y3T6 440 aaKnown RBP18.89■□□□□ 0.61
CASC3-201ENST00000264645 PANK1Q8TE04 598 aa18.88■□□□□ 0.61
CASC3-201ENST00000264645 ADAMTS8Q9UP79 889 aa18.88■□□□□ 0.61
CASC3-201ENST00000264645 E9PSI1 815 aa18.87■□□□□ 0.61
CASC3-201ENST00000264645 C22orf23Q9BZE7 217 aa18.86■□□□□ 0.61
CASC3-201ENST00000264645 ZMYND15Q9H091 742 aa18.86■□□□□ 0.61
CASC3-201ENST00000264645 IPO8O15397 1037 aaKnown RBP18.86■□□□□ 0.61
CASC3-201ENST00000264645 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.85■□□□□ 0.61
CASC3-201ENST00000264645 ESPNB1AK53 854 aa18.85■□□□□ 0.61
CASC3-201ENST00000264645 DRC7Q8IY82 874 aa18.85■□□□□ 0.61
CASC3-201ENST00000264645 PODXL2Q9NZ53 605 aa18.84■□□□□ 0.61
CASC3-201ENST00000264645 IGF1RP08069 1367 aa18.83■□□□□ 0.6
CASC3-201ENST00000264645 STAG3Q9UJ98 1225 aa18.82■□□□□ 0.6
CASC3-201ENST00000264645 NASPP49321 788 aaPredicted RBP18.82■□□□□ 0.6
CASC3-201ENST00000264645 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
CASC3-201ENST00000264645 SYNJ1O43426 1573 aa18.82■□□□□ 0.6
CASC3-201ENST00000264645 C20orf194Q5TEA3 1177 aa18.81■□□□□ 0.6
CASC3-201ENST00000264645 TPM2P07951 284 aa18.81■□□□□ 0.6
CASC3-201ENST00000264645 NOL8Q76FK4 1167 aaKnown RBP18.81■□□□□ 0.6
CASC3-201ENST00000264645 FOXD4L6Q3SYB3 417 aaPredicted RBP18.8■□□□□ 0.6
CASC3-201ENST00000264645 FOXD4L3Q6VB84 417 aaPredicted RBP18.8■□□□□ 0.6
CASC3-201ENST00000264645 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
CASC3-201ENST00000264645 MCM4P33991 863 aa18.8■□□□□ 0.6
CASC3-201ENST00000264645 SYAP1Q96A49 352 aaPredicted RBP18.8■□□□□ 0.6
CASC3-201ENST00000264645 GRPEL1Q9HAV7 217 aa18.8■□□□□ 0.6
CASC3-201ENST00000264645 GOLGA6L4A6NEF3 574 aa18.79■□□□□ 0.6
CASC3-201ENST00000264645 KIAA1211Q6ZU35 1233 aa18.79■□□□□ 0.6
CASC3-201ENST00000264645 ZRSR1Q15695 479 aaKnown RBP18.78■□□□□ 0.6
CASC3-201ENST00000264645 BCAR3O75815 825 aa18.78■□□□□ 0.6
CASC3-201ENST00000264645 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.6
CASC3-201ENST00000264645 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
CASC3-201ENST00000264645 ZNF644Q9H582 1327 aaPredicted RBP18.76■□□□□ 0.59
CASC3-201ENST00000264645 ZKSCAN2Q63HK3 967 aa18.76■□□□□ 0.59
CASC3-201ENST00000264645 MCCP23508 829 aa18.75■□□□□ 0.59
CASC3-201ENST00000264645 PRXQ9BXM0 1461 aa18.75■□□□□ 0.59
CASC3-201ENST00000264645 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
CASC3-201ENST00000264645 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
CASC3-201ENST00000264645 WASHC2CQ9Y4E1 1318 aa18.73■□□□□ 0.59
CASC3-201ENST00000264645 MAP7D2Q96T17 732 aa18.73■□□□□ 0.59
CASC3-201ENST00000264645 PDZRN3Q9UPQ7 1066 aa18.73■□□□□ 0.59
CASC3-201ENST00000264645 HFM1A2PYH4 1435 aa18.73■□□□□ 0.59
CASC3-201ENST00000264645 LNPKQ9C0E8 428 aa18.73■□□□□ 0.59
CASC3-201ENST00000264645 ATAD2BQ9ULI0 1458 aa18.73■□□□□ 0.59
CASC3-201ENST00000264645 MCTP1Q6DN14 999 aa18.72■□□□□ 0.59
CASC3-201ENST00000264645 MAPKBP1O60336 1514 aa18.72■□□□□ 0.59
CASC3-201ENST00000264645 ST18O60284 1047 aa18.72■□□□□ 0.59
CASC3-201ENST00000264645 CSPP1Q1MSJ5 1256 aa18.71■□□□□ 0.59
CASC3-201ENST00000264645 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
CASC3-201ENST00000264645 RNF214Q8ND24 703 aa18.71■□□□□ 0.59
CASC3-201ENST00000264645 HNRNPMP52272 730 aaKnown RBP eCLIP18.71■□□□□ 0.595e-6■■■■□ 21
CASC3-201ENST00000264645 DZIP1LQ8IYY4 767 aaKnown RBP18.69■□□□□ 0.58
CASC3-201ENST00000264645 KCNJ4P48050 445 aa18.69■□□□□ 0.58
CASC3-201ENST00000264645 CAVIN1Q6NZI2 390 aaKnown RBP18.68■□□□□ 0.58
CASC3-201ENST00000264645 ZNF771Q7L3S4 317 aaPredicted RBP18.68■□□□□ 0.58
CASC3-201ENST00000264645 TNNT3P45378 269 aaPredicted RBP18.67■□□□□ 0.58
CASC3-201ENST00000264645 NCOA2Q15596 1464 aa18.67■□□□□ 0.58
CASC3-201ENST00000264645 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
CASC3-201ENST00000264645 CCDC173Q0VFZ6 552 aa18.66■□□□□ 0.58
CASC3-201ENST00000264645 TIAM1Q13009 1591 aa18.66■□□□□ 0.58
CASC3-201ENST00000264645 PANK2Q9BZ23 570 aa18.66■□□□□ 0.58
CASC3-201ENST00000264645 EIF3AQ14152 1382 aaKnown RBP18.65■□□□□ 0.58
CASC3-201ENST00000264645 NAIPQ13075 1403 aa18.65■□□□□ 0.58
CASC3-201ENST00000264645 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
CASC3-201ENST00000264645 GOLGA6L6A8MZA4 724 aa18.64■□□□□ 0.58
CASC3-201ENST00000264645 SRPK2P78362 688 aaKnown RBP18.64■□□□□ 0.58
CASC3-201ENST00000264645 NRDCO43847 1150 aa18.64■□□□□ 0.57
CASC3-201ENST00000264645 PHF14O94880 888 aa18.64■□□□□ 0.57
CASC3-201ENST00000264645 DDX19BQ9UMR2 479 aa18.64■□□□□ 0.57
CASC3-201ENST00000264645 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.57
CASC3-201ENST00000264645 TAOK2Q9UL54 1235 aa18.64■□□□□ 0.57
CASC3-201ENST00000264645 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
CASC3-201ENST00000264645 PDE3AQ14432 1141 aa18.63■□□□□ 0.57
CASC3-201ENST00000264645 ISY1Q9ULR0 285 aaKnown RBP18.63■□□□□ 0.57
CASC3-201ENST00000264645 NCOA1Q15788 1441 aa18.63■□□□□ 0.57
CASC3-201ENST00000264645 MPNDQ8N594 471 aa18.63■□□□□ 0.57
CASC3-201ENST00000264645 CFTRP13569 1480 aa18.62■□□□□ 0.57
CASC3-201ENST00000264645 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
CASC3-201ENST00000264645 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
CASC3-201ENST00000264645 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
CASC3-201ENST00000264645 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
CASC3-201ENST00000264645 NUCB2P80303 420 aa18.61■□□□□ 0.57
CASC3-201ENST00000264645 FGD1P98174 961 aa18.6■□□□□ 0.57
CASC3-201ENST00000264645 UQCRHLA0A096LP55 91 aa18.6■□□□□ 0.57
CASC3-201ENST00000264645 TRIM6-TRIM34B2RNG4 842 aa18.6■□□□□ 0.57
CASC3-201ENST00000264645 UQCRHP07919 91 aa18.6■□□□□ 0.57
CASC3-201ENST00000264645 CLCN1P35523 988 aa18.6■□□□□ 0.57
CASC3-201ENST00000264645 PDCL3Q9H2J4 239 aa18.6■□□□□ 0.57
CASC3-201ENST00000264645 OS9Q13438 667 aaPredicted RBP18.59■□□□□ 0.57
CASC3-201ENST00000264645 RRAGDQ9NQL2 400 aaPredicted RBP18.59■□□□□ 0.57
CASC3-201ENST00000264645 ZSCAN30Q86W11 494 aa18.59■□□□□ 0.57
CASC3-201ENST00000264645 NGEFQ8N5V2 710 aa18.58■□□□□ 0.56
CASC3-201ENST00000264645 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
CASC3-201ENST00000264645 PRDM10Q9NQV6 1147 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms