RNA–Protein interactions for RNA: ENST00000263238.6

ACTR3-201, Transcript of ARP3 actin related protein 3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3, Length 6,718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-201ENST00000263238 NPM1P06748 294 aaKnown RBP eCLIP16.46■□□□□ 0.22
ACTR3-201ENST00000263238 PHF14O94880 888 aa16.45■□□□□ 0.22
ACTR3-201ENST00000263238 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.45■□□□□ 0.22
ACTR3-201ENST00000263238 WIZO95785 1651 aa16.44■□□□□ 0.22
ACTR3-201ENST00000263238 GNL2Q13823 731 aaKnown RBP16.44■□□□□ 0.22
ACTR3-201ENST00000263238 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
ACTR3-201ENST00000263238 ST18O60284 1047 aa16.44■□□□□ 0.22
ACTR3-201ENST00000263238 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
ACTR3-201ENST00000263238 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
ACTR3-201ENST00000263238 MCTP1Q6DN14 999 aa16.42■□□□□ 0.22
ACTR3-201ENST00000263238 PANK3Q9H999 370 aa16.42■□□□□ 0.22
ACTR3-201ENST00000263238 CHMP5Q9NZZ3 219 aa16.42■□□□□ 0.22
ACTR3-201ENST00000263238 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
ACTR3-201ENST00000263238 AKNAQ7Z591 1439 aa16.42■□□□□ 0.22
ACTR3-201ENST00000263238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.41■□□□□ 0.22
ACTR3-201ENST00000263238 BAZ1AQ9NRL2 1556 aaPredicted RBP16.41■□□□□ 0.22
ACTR3-201ENST00000263238 STK26Q9P289 416 aa16.41■□□□□ 0.22
ACTR3-201ENST00000263238 GOLGA6L1Q8N7Z2 621 aa16.4■□□□□ 0.22
ACTR3-201ENST00000263238 NUP155O75694 1391 aa16.39■□□□□ 0.21
ACTR3-201ENST00000263238 SLC4A10Q6U841 1118 aa16.38■□□□□ 0.21
ACTR3-201ENST00000263238 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
ACTR3-201ENST00000263238 CCAR2Q8N163 923 aaKnown RBP16.37■□□□□ 0.21
ACTR3-201ENST00000263238 TRAK2O60296 914 aa16.37■□□□□ 0.21
ACTR3-201ENST00000263238 NASPP49321 788 aaPredicted RBP16.37■□□□□ 0.21
ACTR3-201ENST00000263238 TPM4P67936 248 aa16.37■□□□□ 0.21
ACTR3-201ENST00000263238 MRE11P49959 708 aa16.36■□□□□ 0.21
ACTR3-201ENST00000263238 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
ACTR3-201ENST00000263238 CREBRFQ8IUR6 639 aa16.36■□□□□ 0.21
ACTR3-201ENST00000263238 RILPL2Q969X0 211 aa16.35■□□□□ 0.21
ACTR3-201ENST00000263238 RTF1Q92541 710 aaKnown RBP16.34■□□□□ 0.21
ACTR3-201ENST00000263238 PHLDB1Q86UU1 1377 aa16.34■□□□□ 0.21
ACTR3-201ENST00000263238 USP47Q96K76 1375 aa16.34■□□□□ 0.21
ACTR3-201ENST00000263238 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
ACTR3-201ENST00000263238 KIF16BQ96L93 1317 aa16.33■□□□□ 0.2
ACTR3-201ENST00000263238 APAF1O14727 1248 aa16.33■□□□□ 0.2
ACTR3-201ENST00000263238 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
ACTR3-201ENST00000263238 C22orf23Q9BZE7 217 aa16.33■□□□□ 0.2
ACTR3-201ENST00000263238 CDCA7LQ96GN5 454 aa16.33■□□□□ 0.2
ACTR3-201ENST00000263238 ELL2O00472 640 aaPredicted RBP16.33■□□□□ 0.2
ACTR3-201ENST00000263238 TPM2P07951 284 aa16.33■□□□□ 0.2
ACTR3-201ENST00000263238 RNF214Q8ND24 703 aa16.33■□□□□ 0.2
ACTR3-201ENST00000263238 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
ACTR3-201ENST00000263238 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
ACTR3-201ENST00000263238 CCDC18Q5T9S5 1454 aa16.32■□□□□ 0.2
ACTR3-201ENST00000263238 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
ACTR3-201ENST00000263238 LMOD2Q6P5Q4 547 aa16.32■□□□□ 0.2
ACTR3-201ENST00000263238 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
ACTR3-201ENST00000263238 E9PSI1 815 aa16.31■□□□□ 0.2
ACTR3-201ENST00000263238 CCDC7Q96M83 1385 aa16.3■□□□□ 0.2
ACTR3-201ENST00000263238 KIF7Q2M1P5 1343 aa16.3■□□□□ 0.2
ACTR3-201ENST00000263238 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
ACTR3-201ENST00000263238 FBXW7Q969H0 707 aa16.29■□□□□ 0.2
ACTR3-201ENST00000263238 BACH2Q9BYV9 841 aa16.29■□□□□ 0.2
ACTR3-201ENST00000263238 GOLGA6L19H0YKK7 550 aa16.29■□□□□ 0.2
ACTR3-201ENST00000263238 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
ACTR3-201ENST00000263238 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
ACTR3-201ENST00000263238 CAVIN1Q6NZI2 390 aaKnown RBP16.27■□□□□ 0.2
ACTR3-201ENST00000263238 MPNDQ8N594 471 aa16.27■□□□□ 0.2
ACTR3-201ENST00000263238 SKAP1Q86WV1 359 aa16.27■□□□□ 0.19
ACTR3-201ENST00000263238 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
ACTR3-201ENST00000263238 PDE4CQ08493 712 aa16.26■□□□□ 0.19
ACTR3-201ENST00000263238 NUTM2DQ5VT03 806 aaPredicted RBP16.25■□□□□ 0.19
ACTR3-201ENST00000263238 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
ACTR3-201ENST00000263238 LNPKQ9C0E8 428 aa16.25■□□□□ 0.19
ACTR3-201ENST00000263238 CCDC39Q9UFE4 941 aa16.25■□□□□ 0.19
ACTR3-201ENST00000263238 HMMRO75330 724 aa16.25■□□□□ 0.19
ACTR3-201ENST00000263238 SETQ01105 290 aaPredicted RBP16.25■□□□□ 0.19
ACTR3-201ENST00000263238 HDGFL2Q7Z4V5 671 aaPredicted RBP16.25■□□□□ 0.19
ACTR3-201ENST00000263238 BECN2A8MW95 431 aa16.24■□□□□ 0.19
ACTR3-201ENST00000263238 PRDM10Q9NQV6 1147 aa16.24■□□□□ 0.19
ACTR3-201ENST00000263238 H3BQV1 296 aa16.24■□□□□ 0.19
ACTR3-201ENST00000263238 IFFO2Q5TF58 517 aa16.24■□□□□ 0.19
ACTR3-201ENST00000263238 KANK1Q14678 1352 aa16.23■□□□□ 0.19
ACTR3-201ENST00000263238 UQCRHLA0A096LP55 91 aa16.23■□□□□ 0.19
ACTR3-201ENST00000263238 UQCRHP07919 91 aa16.23■□□□□ 0.19
ACTR3-201ENST00000263238 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
ACTR3-201ENST00000263238 PATL2C9JE40 543 aaKnown RBP16.22■□□□□ 0.19
ACTR3-201ENST00000263238 CLSTN1O94985 981 aa16.22■□□□□ 0.19
ACTR3-201ENST00000263238 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.196e-7■■■■■ 29.7
ACTR3-201ENST00000263238 SF3A1Q15459 793 aaKnown RBP16.22■□□□□ 0.19
ACTR3-201ENST00000263238 TEX35Q5T0J7 233 aa16.22■□□□□ 0.19
ACTR3-201ENST00000263238 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
ACTR3-201ENST00000263238 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
ACTR3-201ENST00000263238 RRP9O43818 475 aaKnown RBP16.21■□□□□ 0.19
ACTR3-201ENST00000263238 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
ACTR3-201ENST00000263238 CCDC173Q0VFZ6 552 aa16.21■□□□□ 0.18
ACTR3-201ENST00000263238 NACADO15069 1562 aa16.2■□□□□ 0.18
ACTR3-201ENST00000263238 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
ACTR3-201ENST00000263238 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
ACTR3-201ENST00000263238 DZIP1LQ8IYY4 767 aaKnown RBP16.2■□□□□ 0.18
ACTR3-201ENST00000263238 GPATCH3Q96I76 525 aa16.2■□□□□ 0.18
ACTR3-201ENST00000263238 STK31Q9BXU1 1019 aa16.2■□□□□ 0.18
ACTR3-201ENST00000263238 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
ACTR3-201ENST00000263238 UBE2Q2Q8WVN8 375 aa16.19■□□□□ 0.18
ACTR3-201ENST00000263238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.19■□□□□ 0.182e-8■■□□□ 11.5
ACTR3-201ENST00000263238 PRPF40AO75400 957 aaKnown RBP16.18■□□□□ 0.18
ACTR3-201ENST00000263238 FOSBP53539 338 aa16.18■□□□□ 0.18
ACTR3-201ENST00000263238 NUCB2P80303 420 aa16.17■□□□□ 0.18
ACTR3-201ENST00000263238 PES1O00541 588 aaKnown RBP16.17■□□□□ 0.18
ACTR3-201ENST00000263238 TPM3P06753 285 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms