RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
PGBD1-201ENST00000259883 C9orf84Q5VXU9 1444 aa17.51■□□□□ 0.39
PGBD1-201ENST00000259883 RGS3P49796 1198 aa17.51■□□□□ 0.39
PGBD1-201ENST00000259883 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
PGBD1-201ENST00000259883 KIAA0586Q9BVV6 1533 aa17.51■□□□□ 0.39
PGBD1-201ENST00000259883 KIAA0556O60303 1618 aa17.5■□□□□ 0.39
PGBD1-201ENST00000259883 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
PGBD1-201ENST00000259883 RAPGEF6Q8TEU7 1601 aa17.5■□□□□ 0.39
PGBD1-201ENST00000259883 MYT1LQ9UL68 1186 aa17.5■□□□□ 0.39
PGBD1-201ENST00000259883 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
PGBD1-201ENST00000259883 ADAMTS8Q9UP79 889 aa17.47■□□□□ 0.39
PGBD1-201ENST00000259883 MRC2Q9UBG0 1479 aa17.47■□□□□ 0.39
PGBD1-201ENST00000259883 GRIN2AQ12879 1464 aa17.46■□□□□ 0.39
PGBD1-201ENST00000259883 KDM5CP41229 1560 aa17.46■□□□□ 0.39
PGBD1-201ENST00000259883 DISP3Q9P2K9 1392 aa17.46■□□□□ 0.38
PGBD1-201ENST00000259883 MBD5Q9P267 1494 aa17.45■□□□□ 0.38
PGBD1-201ENST00000259883 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
PGBD1-201ENST00000259883 DAXXQ9UER7 740 aaPredicted RBP17.45■□□□□ 0.38
PGBD1-201ENST00000259883 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
PGBD1-201ENST00000259883 BACH2Q9BYV9 841 aa17.44■□□□□ 0.38
PGBD1-201ENST00000259883 CCDC144AA2RUR9 1427 aa17.44■□□□□ 0.38
PGBD1-201ENST00000259883 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
PGBD1-201ENST00000259883 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
PGBD1-201ENST00000259883 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
PGBD1-201ENST00000259883 ARID4BQ4LE39 1312 aaPredicted RBP17.41■□□□□ 0.38
PGBD1-201ENST00000259883 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
PGBD1-201ENST00000259883 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
PGBD1-201ENST00000259883 CARMIL2Q6F5E8 1435 aa17.41■□□□□ 0.38
PGBD1-201ENST00000259883 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
PGBD1-201ENST00000259883 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
PGBD1-201ENST00000259883 TMF1P82094 1093 aa17.4■□□□□ 0.38
PGBD1-201ENST00000259883 ANO8Q9HCE9 1232 aaPredicted RBP17.38■□□□□ 0.37
PGBD1-201ENST00000259883 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.38■□□□□ 0.37
PGBD1-201ENST00000259883 IFT140Q96RY7 1462 aa17.37■□□□□ 0.37
PGBD1-201ENST00000259883 TESK2Q96S53 571 aa17.36■□□□□ 0.37
PGBD1-201ENST00000259883 ATP10BO94823 1461 aa17.35■□□□□ 0.37
PGBD1-201ENST00000259883 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
PGBD1-201ENST00000259883 ARXQ96QS3 562 aa17.34■□□□□ 0.37
PGBD1-201ENST00000259883 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
PGBD1-201ENST00000259883 PDE3BQ13370 1112 aa17.34■□□□□ 0.37
PGBD1-201ENST00000259883 POLR1AO95602 1720 aaPredicted RBP17.33■□□□□ 0.36
PGBD1-201ENST00000259883 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.36
PGBD1-201ENST00000259883 APAF1O14727 1248 aa17.32■□□□□ 0.36
PGBD1-201ENST00000259883 BCAR3O75815 825 aa17.32■□□□□ 0.36
PGBD1-201ENST00000259883 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
PGBD1-201ENST00000259883 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
PGBD1-201ENST00000259883 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
PGBD1-201ENST00000259883 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
PGBD1-201ENST00000259883 PRAG1Q86YV5 1406 aa17.31■□□□□ 0.36
PGBD1-201ENST00000259883 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
PGBD1-201ENST00000259883 ADGRL2O95490 1459 aa17.31■□□□□ 0.36
PGBD1-201ENST00000259883 CHGAP10645 457 aaKnown RBP17.3■□□□□ 0.36
PGBD1-201ENST00000259883 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
PGBD1-201ENST00000259883 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
PGBD1-201ENST00000259883 FRAT1Q92837 279 aaPredicted RBP17.3■□□□□ 0.36
PGBD1-201ENST00000259883 ITSN2Q9NZM3 1697 aa17.29■□□□□ 0.36
PGBD1-201ENST00000259883 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
PGBD1-201ENST00000259883 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
PGBD1-201ENST00000259883 PTPRGP23470 1445 aa17.29■□□□□ 0.36
PGBD1-201ENST00000259883 ERBINQ96RT1 1412 aa17.29■□□□□ 0.36
PGBD1-201ENST00000259883 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
PGBD1-201ENST00000259883 PLEKHH2Q8IVE3 1493 aa17.28■□□□□ 0.36
PGBD1-201ENST00000259883 BCL2L13Q9BXK5 485 aa17.27■□□□□ 0.36
PGBD1-201ENST00000259883 FAM135AQ9P2D6 1515 aa17.27■□□□□ 0.36
PGBD1-201ENST00000259883 NFKBIBQ15653 356 aa17.26■□□□□ 0.35
PGBD1-201ENST00000259883 MS4A1P11836 297 aa17.26■□□□□ 0.35
PGBD1-201ENST00000259883 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
PGBD1-201ENST00000259883 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
PGBD1-201ENST00000259883 A2MP01023 1474 aa17.25■□□□□ 0.35
PGBD1-201ENST00000259883 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
PGBD1-201ENST00000259883 AFAP1Q8N556 730 aa17.24■□□□□ 0.35
PGBD1-201ENST00000259883 CDC42BPAQ5VT25 1732 aa17.23■□□□□ 0.35
PGBD1-201ENST00000259883 SYNJ2O15056 1496 aa17.23■□□□□ 0.35
PGBD1-201ENST00000259883 SPRYD3Q8NCJ5 442 aa17.23■□□□□ 0.35
PGBD1-201ENST00000259883 PANK1Q8TE04 598 aa17.23■□□□□ 0.35
PGBD1-201ENST00000259883 PLA2R1Q13018 1463 aa17.22■□□□□ 0.35
PGBD1-201ENST00000259883 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
PGBD1-201ENST00000259883 FRAT2O75474 233 aaPredicted RBP17.22■□□□□ 0.35
PGBD1-201ENST00000259883 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
PGBD1-201ENST00000259883 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
PGBD1-201ENST00000259883 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
PGBD1-201ENST00000259883 DDRGK1Q96HY6 314 aa17.22■□□□□ 0.35
PGBD1-201ENST00000259883 SLKQ9H2G2 1235 aaPredicted RBP17.22■□□□□ 0.35
PGBD1-201ENST00000259883 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
PGBD1-201ENST00000259883 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.35
PGBD1-201ENST00000259883 CCDC141Q6ZP82 1450 aa17.21■□□□□ 0.35
PGBD1-201ENST00000259883 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
PGBD1-201ENST00000259883 CROCC2H7BZ55 1655 aa17.2■□□□□ 0.34
PGBD1-201ENST00000259883 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
PGBD1-201ENST00000259883 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
PGBD1-201ENST00000259883 NUTM2DQ5VT03 806 aaPredicted RBP17.19■□□□□ 0.34
PGBD1-201ENST00000259883 CENPQQ7L2Z9 268 aaPredicted RBP17.19■□□□□ 0.34
PGBD1-201ENST00000259883 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
PGBD1-201ENST00000259883 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
PGBD1-201ENST00000259883 COL17A1Q9UMD9 1497 aaPredicted RBP17.18■□□□□ 0.34
PGBD1-201ENST00000259883 C8orf34Q49A92 452 aa17.17■□□□□ 0.34
PGBD1-201ENST00000259883 IGHDP01880 384 aa17.17■□□□□ 0.34
PGBD1-201ENST00000259883 TNNQ9UQP3 1299 aa17.17■□□□□ 0.34
PGBD1-201ENST00000259883 EIF5BO60841 1220 aaKnown RBP17.16■□□□□ 0.34
PGBD1-201ENST00000259883 MAGI2Q86UL8 1455 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms