RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 NAP1L5Q96NT1 182 aaPredicted RBP18.35■□□□□ 0.53
LIMD2-201ENST00000259006 PDIA4P13667 645 aaKnown RBP18.35■□□□□ 0.53
LIMD2-201ENST00000259006 RGL3Q3MIN7 710 aa18.35■□□□□ 0.53
LIMD2-201ENST00000259006 NUP160Q12769 1436 aa18.35■□□□□ 0.53
LIMD2-201ENST00000259006 RNF123Q5XPI4 1314 aa18.34■□□□□ 0.53
LIMD2-201ENST00000259006 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
LIMD2-201ENST00000259006 TEX14Q8IWB6 1497 aa18.32■□□□□ 0.52
LIMD2-201ENST00000259006 PTPRGP23470 1445 aa18.32■□□□□ 0.52
LIMD2-201ENST00000259006 EPRSP07814 1512 aaKnown RBP18.32■□□□□ 0.52
LIMD2-201ENST00000259006 KIAA0556O60303 1618 aa18.31■□□□□ 0.52
LIMD2-201ENST00000259006 TCERG1O14776 1098 aaKnown RBP18.31■□□□□ 0.52
LIMD2-201ENST00000259006 BACH2Q9BYV9 841 aa18.31■□□□□ 0.52
LIMD2-201ENST00000259006 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
LIMD2-201ENST00000259006 CRBNQ96SW2 442 aa18.3■□□□□ 0.52
LIMD2-201ENST00000259006 HECW1Q76N89 1606 aa18.3■□□□□ 0.52
LIMD2-201ENST00000259006 DAPK1P53355 1430 aa18.29■□□□□ 0.52
LIMD2-201ENST00000259006 PPM1GO15355 546 aaPredicted RBP18.29■□□□□ 0.52
LIMD2-201ENST00000259006 ARID4BQ4LE39 1312 aaPredicted RBP18.29■□□□□ 0.52
LIMD2-201ENST00000259006 ABCC5O15440 1437 aa18.29■□□□□ 0.52
LIMD2-201ENST00000259006 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
LIMD2-201ENST00000259006 HSP90AA1P07900 732 aaKnown RBP18.28■□□□□ 0.52
LIMD2-201ENST00000259006 CHD1O14646 1710 aa18.27■□□□□ 0.52
LIMD2-201ENST00000259006 MYBBP1AQ9BQG0 1328 aaKnown RBP18.26■□□□□ 0.51
LIMD2-201ENST00000259006 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
LIMD2-201ENST00000259006 RGS3P49796 1198 aa18.25■□□□□ 0.51
LIMD2-201ENST00000259006 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
LIMD2-201ENST00000259006 TCOF1Q13428 1488 aaKnown RBP18.24■□□□□ 0.51
LIMD2-201ENST00000259006 RRP9O43818 475 aaKnown RBP18.24■□□□□ 0.51
LIMD2-201ENST00000259006 KIF15Q9NS87 1388 aa18.23■□□□□ 0.51
LIMD2-201ENST00000259006 RRAGDQ9NQL2 400 aaPredicted RBP18.23■□□□□ 0.51
LIMD2-201ENST00000259006 GCC2Q8IWJ2 1684 aa18.22■□□□□ 0.51
LIMD2-201ENST00000259006 NUP155O75694 1391 aa18.22■□□□□ 0.51
LIMD2-201ENST00000259006 ERCC6L2Q5T890 1561 aa18.21■□□□□ 0.51
LIMD2-201ENST00000259006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
LIMD2-201ENST00000259006 NBPF1Q3BBV0 1214 aa18.2■□□□□ 0.5
LIMD2-201ENST00000259006 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
LIMD2-201ENST00000259006 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
LIMD2-201ENST00000259006 NFKBIBQ15653 356 aa18.2■□□□□ 0.5
LIMD2-201ENST00000259006 ARHGEF11O15085 1522 aa18.19■□□□□ 0.5
LIMD2-201ENST00000259006 ARXQ96QS3 562 aa18.19■□□□□ 0.5
LIMD2-201ENST00000259006 RALBP1Q15311 655 aa18.18■□□□□ 0.5
LIMD2-201ENST00000259006 NLRP13Q86W25 1043 aa18.18■□□□□ 0.5
LIMD2-201ENST00000259006 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
LIMD2-201ENST00000259006 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
LIMD2-201ENST00000259006 PZPP20742 1482 aa18.16■□□□□ 0.5
LIMD2-201ENST00000259006 BRD4O60885 1362 aaPredicted RBP18.15■□□□□ 0.5
LIMD2-201ENST00000259006 KIAA1107Q9UPP5 1409 aa18.14■□□□□ 0.5
LIMD2-201ENST00000259006 KTN1Q86UP2 1357 aaKnown RBP18.14■□□□□ 0.49
LIMD2-201ENST00000259006 PANK3Q9H999 370 aa18.14■□□□□ 0.49
LIMD2-201ENST00000259006 LRPPRCP42704 1394 aaKnown RBP18.13■□□□□ 0.49
LIMD2-201ENST00000259006 ATP10BO94823 1461 aa18.12■□□□□ 0.49
LIMD2-201ENST00000259006 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
LIMD2-201ENST00000259006 FRAT2O75474 233 aaPredicted RBP18.12■□□□□ 0.49
LIMD2-201ENST00000259006 HNRNPMP52272 730 aaKnown RBP eCLIP18.12■□□□□ 0.49
LIMD2-201ENST00000259006 MS4A1P11836 297 aa18.12■□□□□ 0.49
LIMD2-201ENST00000259006 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
LIMD2-201ENST00000259006 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
LIMD2-201ENST00000259006 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
LIMD2-201ENST00000259006 TROQ12816 1431 aaPredicted RBP18.09■□□□□ 0.49
LIMD2-201ENST00000259006 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
LIMD2-201ENST00000259006 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
LIMD2-201ENST00000259006 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
LIMD2-201ENST00000259006 ANKRD50Q9ULJ7 1429 aa18.07■□□□□ 0.48
LIMD2-201ENST00000259006 PDE3BQ13370 1112 aa18.06■□□□□ 0.48
LIMD2-201ENST00000259006 ANKRD30AQ9BXX3 1397 aa18.06■□□□□ 0.48
LIMD2-201ENST00000259006 KDM5CP41229 1560 aa18.04■□□□□ 0.48
LIMD2-201ENST00000259006 CAMSAP2Q08AD1 1489 aa18.03■□□□□ 0.48
LIMD2-201ENST00000259006 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
LIMD2-201ENST00000259006 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
LIMD2-201ENST00000259006 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
LIMD2-201ENST00000259006 SLKQ9H2G2 1235 aaPredicted RBP18.03■□□□□ 0.48
LIMD2-201ENST00000259006 DNMT1P26358 1616 aaKnown RBP18.02■□□□□ 0.47
LIMD2-201ENST00000259006 KIF14Q15058 1648 aa18.01■□□□□ 0.47
LIMD2-201ENST00000259006 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
LIMD2-201ENST00000259006 PRDM4Q9UKN5 801 aa18.01■□□□□ 0.47
LIMD2-201ENST00000259006 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
LIMD2-201ENST00000259006 BBXQ8WY36 941 aaPredicted RBP18■□□□□ 0.47
LIMD2-201ENST00000259006 SPRYD3Q8NCJ5 442 aa18■□□□□ 0.47
LIMD2-201ENST00000259006 FAM161AQ3B820 660 aa17.99■□□□□ 0.47
LIMD2-201ENST00000259006 ABCA8O94911 1581 aa17.99■□□□□ 0.47
LIMD2-201ENST00000259006 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
LIMD2-201ENST00000259006 C8orf34Q49A92 452 aa17.99■□□□□ 0.47
LIMD2-201ENST00000259006 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
LIMD2-201ENST00000259006 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
LIMD2-201ENST00000259006 BCAR3O75815 825 aa17.98■□□□□ 0.47
LIMD2-201ENST00000259006 PARD3Q8TEW0 1356 aa17.97■□□□□ 0.47
LIMD2-201ENST00000259006 GPATCH8Q9UKJ3 1502 aaKnown RBP17.97■□□□□ 0.47
LIMD2-201ENST00000259006 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
LIMD2-201ENST00000259006 PAXIP1Q6ZW49 1069 aaPredicted RBP17.97■□□□□ 0.47
LIMD2-201ENST00000259006 RALGAPBQ86X10 1494 aa17.96■□□□□ 0.47
LIMD2-201ENST00000259006 CENPQQ7L2Z9 268 aaPredicted RBP17.95■□□□□ 0.46
LIMD2-201ENST00000259006 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
LIMD2-201ENST00000259006 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
LIMD2-201ENST00000259006 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
LIMD2-201ENST00000259006 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
LIMD2-201ENST00000259006 PLEKHH1Q9ULM0 1364 aa17.94■□□□□ 0.46
LIMD2-201ENST00000259006 CANXP27824 592 aaKnown RBP17.93■□□□□ 0.46
LIMD2-201ENST00000259006 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
LIMD2-201ENST00000259006 POGKQ9P215 609 aa17.93■□□□□ 0.46
LIMD2-201ENST00000259006 SEC24BO95487 1268 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms