RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 IQGAP3Q86VI3 1631 aa30.03■■■□□ 2.4
CLN6-201ENST00000249806 ERBINQ96RT1 1412 aa30.03■■■□□ 2.4
CLN6-201ENST00000249806 CCDC184Q52MB2 194 aa30.03■■■□□ 2.4
CLN6-201ENST00000249806 RGL3Q3MIN7 710 aa30.02■■■□□ 2.4
CLN6-201ENST00000249806 POLR3GLQ9BT43 218 aa30.01■■■□□ 2.39
CLN6-201ENST00000249806 SPAG9O60271 1321 aaKnown RBP30■■■□□ 2.39
CLN6-201ENST00000249806 ARAP3Q8WWN8 1544 aa29.98■■■□□ 2.39
CLN6-201ENST00000249806 MAGI2Q86UL8 1455 aa29.97■■■□□ 2.39
CLN6-201ENST00000249806 HNRNPUQ00839 825 aaKnown RBP eCLIP29.94■■■□□ 2.38
CLN6-201ENST00000249806 FANCAO15360 1455 aa29.93■■■□□ 2.38
CLN6-201ENST00000249806 ST20-MTHFSA0A0A6YYL1 179 aa29.93■■■□□ 2.38
CLN6-201ENST00000249806 OSCARQ8IYS5 282 aa29.93■■■□□ 2.38
CLN6-201ENST00000249806 RTEL1-TNFRSF6BF6WH68 1400 aa29.91■■■□□ 2.38
CLN6-201ENST00000249806 ASXL2Q76L83 1435 aa29.91■■■□□ 2.38
CLN6-201ENST00000249806 ROCK2O75116 1388 aaKnown RBP29.91■■■□□ 2.38
CLN6-201ENST00000249806 PELP1Q8IZL8 1130 aaKnown RBP29.91■■■□□ 2.38
CLN6-201ENST00000249806 ABCA9Q8IUA7 1624 aa29.9■■■□□ 2.38
CLN6-201ENST00000249806 ZFYVE16Q7Z3T8 1539 aa29.9■■■□□ 2.38
CLN6-201ENST00000249806 PRAG1Q86YV5 1406 aa29.9■■■□□ 2.38
CLN6-201ENST00000249806 ARID4BQ4LE39 1312 aaPredicted RBP29.89■■■□□ 2.37
CLN6-201ENST00000249806 A2MP01023 1474 aa29.88■■■□□ 2.37
CLN6-201ENST00000249806 DHX29Q7Z478 1369 aaKnown RBP29.87■■■□□ 2.37
CLN6-201ENST00000249806 MRS2Q9HD23 443 aa29.87■■■□□ 2.37
CLN6-201ENST00000249806 CNGB1Q14028 1251 aaPredicted RBP29.86■■■□□ 2.37
CLN6-201ENST00000249806 ATP10AO60312 1499 aa29.86■■■□□ 2.37
CLN6-201ENST00000249806 NBPF1Q3BBV0 1214 aa29.86■■■□□ 2.37
CLN6-201ENST00000249806 TRPM1Q7Z4N2 1603 aa29.85■■■□□ 2.37
CLN6-201ENST00000249806 FAM9BQ8IZU0 186 aa29.83■■■□□ 2.37
CLN6-201ENST00000249806 FKBP8Q14318 412 aa29.83■■■□□ 2.37
CLN6-201ENST00000249806 MYT1LQ9UL68 1186 aa29.83■■■□□ 2.37
CLN6-201ENST00000249806 SCAPERQ9BY12 1400 aa29.82■■■□□ 2.36
CLN6-201ENST00000249806 ADGRL1O94910 1474 aa29.82■■■□□ 2.36
CLN6-201ENST00000249806 ATP7AQ04656 1500 aa29.8■■■□□ 2.36
CLN6-201ENST00000249806 E9PCH4 1651 aa29.78■■■□□ 2.36
CLN6-201ENST00000249806 NPM1P06748 294 aaKnown RBP eCLIP29.78■■■□□ 2.36
CLN6-201ENST00000249806 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
CLN6-201ENST00000249806 BCANQ96GW7 911 aa29.75■■■□□ 2.35
CLN6-201ENST00000249806 KIF3BO15066 747 aa29.74■■■□□ 2.35
CLN6-201ENST00000249806 DEPDC5O75140 1603 aa29.72■■■□□ 2.35
CLN6-201ENST00000249806 GPRASP1Q5JY77 1395 aa29.72■■■□□ 2.35
CLN6-201ENST00000249806 NEFLP07196 543 aa29.69■■■□□ 2.34
CLN6-201ENST00000249806 KANK1Q14678 1352 aa29.66■■■□□ 2.34
CLN6-201ENST00000249806 TRPM2O94759 1503 aa29.65■■■□□ 2.34
CLN6-201ENST00000249806 PTPRTO14522 1441 aa29.65■■■□□ 2.34
CLN6-201ENST00000249806 SPHKAPQ2M3C7 1700 aa29.64■■■□□ 2.34
CLN6-201ENST00000249806 EIF2AK4Q9P2K8 1649 aaKnown RBP29.64■■■□□ 2.34
CLN6-201ENST00000249806 PRDM15P57071 1507 aaPredicted RBP29.64■■■□□ 2.33
CLN6-201ENST00000249806 TET3O43151 1660 aa29.63■■■□□ 2.33
CLN6-201ENST00000249806 KIDINS220Q9ULH0 1771 aa29.62■■■□□ 2.33
CLN6-201ENST00000249806 VWDEQ8N2E2 1590 aa29.62■■■□□ 2.33
CLN6-201ENST00000249806 LAMC1P11047 1609 aa29.62■■■□□ 2.33
CLN6-201ENST00000249806 CD109Q6YHK3 1445 aa29.61■■■□□ 2.33
CLN6-201ENST00000249806 TESK2Q96S53 571 aa29.61■■■□□ 2.33
CLN6-201ENST00000249806 CLTCL1P53675 1640 aa29.6■■■□□ 2.33
CLN6-201ENST00000249806 CEP152O94986 1710 aa29.58■■■□□ 2.33
CLN6-201ENST00000249806 ZNF518AQ6AHZ1 1483 aa29.58■■■□□ 2.33
CLN6-201ENST00000249806 MROH1Q8NDA8 1641 aa29.58■■■□□ 2.33
CLN6-201ENST00000249806 ZBED9Q6R2W3 1325 aa29.57■■■□□ 2.32
CLN6-201ENST00000249806 DISP3Q9P2K9 1392 aa29.56■■■□□ 2.32
CLN6-201ENST00000249806 MADDQ8WXG6 1647 aa29.53■■■□□ 2.32
CLN6-201ENST00000249806 COL17A1Q9UMD9 1497 aaPredicted RBP29.53■■■□□ 2.32
CLN6-201ENST00000249806 RNF17Q9BXT8 1623 aaKnown RBP29.52■■■□□ 2.32
CLN6-201ENST00000249806 TMC1Q8TDI8 760 aa29.51■■■□□ 2.31
CLN6-201ENST00000249806 PNISRQ8TF01 805 aaKnown RBP29.49■■■□□ 2.31
CLN6-201ENST00000249806 PER1O15534 1290 aaPredicted RBP29.48■■■□□ 2.31
CLN6-201ENST00000249806 POGZQ7Z3K3 1410 aa29.48■■■□□ 2.31
CLN6-201ENST00000249806 UGGT1Q9NYU2 1555 aa29.48■■■□□ 2.31
CLN6-201ENST00000249806 RALBP1Q15311 655 aa29.48■■■□□ 2.31
CLN6-201ENST00000249806 TMF1P82094 1093 aa29.47■■■□□ 2.31
CLN6-201ENST00000249806 MYBBP1AQ9BQG0 1328 aaKnown RBP29.46■■■□□ 2.31
CLN6-201ENST00000249806 CFAP74Q9C0B2 1584 aa29.46■■■□□ 2.31
CLN6-201ENST00000249806 IRX6P78412 446 aaPredicted RBP29.46■■■□□ 2.31
CLN6-201ENST00000249806 STAC3Q96MF2 364 aa29.45■■■□□ 2.31
CLN6-201ENST00000249806 KTN1Q86UP2 1357 aaKnown RBP29.44■■■□□ 2.3
CLN6-201ENST00000249806 EFCAB6Q5THR3 1501 aa29.44■■■□□ 2.3
CLN6-201ENST00000249806 PPRC1Q5VV67 1664 aaKnown RBP29.43■■■□□ 2.3
CLN6-201ENST00000249806 SENP3-EIF4A1A0A087X0R7 540 aa29.42■■■□□ 2.3
CLN6-201ENST00000249806 MLH3Q9UHC1 1453 aa29.42■■■□□ 2.3
CLN6-201ENST00000249806 PANK3Q9H999 370 aa29.41■■■□□ 2.3
CLN6-201ENST00000249806 GGT6Q6P531 493 aa29.41■■■□□ 2.3
CLN6-201ENST00000249806 RAPGEF3O95398 923 aa29.4■■■□□ 2.3
CLN6-201ENST00000249806 BRD4O60885 1362 aaPredicted RBP29.4■■■□□ 2.3
CLN6-201ENST00000249806 IQGAP1P46940 1657 aa29.4■■■□□ 2.3
CLN6-201ENST00000249806 FRMPD1Q5SYB0 1578 aa29.39■■■□□ 2.3
CLN6-201ENST00000249806 PARD3Q8TEW0 1356 aa29.38■■■□□ 2.29
CLN6-201ENST00000249806 HECW2Q9P2P5 1572 aa29.38■■■□□ 2.29
CLN6-201ENST00000249806 CFAP65Q6ZU64 1925 aaKnown RBP29.37■■■□□ 2.29
CLN6-201ENST00000249806 LMTK2Q8IWU2 1503 aa29.36■■■□□ 2.29
CLN6-201ENST00000249806 KIF1BO60333 1816 aa29.36■■■□□ 2.29
CLN6-201ENST00000249806 CC2D1BQ5T0F9 858 aaKnown RBP29.36■■■□□ 2.29
CLN6-201ENST00000249806 SCAF11Q99590 1463 aaKnown RBP29.35■■■□□ 2.29
CLN6-201ENST00000249806 TSHZ2Q9NRE2 1034 aa29.35■■■□□ 2.29
CLN6-201ENST00000249806 NEURL4Q96JN8 1562 aa29.35■■■□□ 2.29
CLN6-201ENST00000249806 ADGRF5Q8IZF2 1346 aa29.34■■■□□ 2.29
CLN6-201ENST00000249806 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
CLN6-201ENST00000249806 ABCA6Q8N139 1617 aa29.33■■■□□ 2.29
CLN6-201ENST00000249806 CFAP70Q5T0N1 1121 aa29.33■■■□□ 2.29
CLN6-201ENST00000249806 LRPPRCP42704 1394 aaKnown RBP29.33■■■□□ 2.29
CLN6-201ENST00000249806 NLRP13Q86W25 1043 aa29.32■■■□□ 2.28
CLN6-201ENST00000249806 NEO1Q92859 1461 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms