RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 HECW2Q9P2P5 1572 aa19.16■□□□□ 0.66
LSM8-201ENST00000249299 RICTORQ6R327 1708 aa19.15■□□□□ 0.66
LSM8-201ENST00000249299 DHX29Q7Z478 1369 aaKnown RBP19.15■□□□□ 0.66
LSM8-201ENST00000249299 TSPOAP1O95153 1857 aa19.14■□□□□ 0.65
LSM8-201ENST00000249299 FRMPD1Q5SYB0 1578 aa19.12■□□□□ 0.65
LSM8-201ENST00000249299 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
LSM8-201ENST00000249299 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
LSM8-201ENST00000249299 MYT1LQ9UL68 1186 aa19.1■□□□□ 0.65
LSM8-201ENST00000249299 COL17A1Q9UMD9 1497 aaPredicted RBP19.1■□□□□ 0.65
LSM8-201ENST00000249299 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
LSM8-201ENST00000249299 A2MP01023 1474 aa19.08■□□□□ 0.65
LSM8-201ENST00000249299 CCER1Q8TC90 406 aaPredicted RBP19.07■□□□□ 0.64
LSM8-201ENST00000249299 EIF2AK4Q9P2K8 1649 aaKnown RBP19.06■□□□□ 0.64
LSM8-201ENST00000249299 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
LSM8-201ENST00000249299 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
LSM8-201ENST00000249299 ATP10AO60312 1499 aa19.05■□□□□ 0.64
LSM8-201ENST00000249299 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
LSM8-201ENST00000249299 KDM6BO15054 1643 aa19.04■□□□□ 0.64
LSM8-201ENST00000249299 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
LSM8-201ENST00000249299 DIP2CQ9Y2E4 1556 aa19.03■□□□□ 0.64
LSM8-201ENST00000249299 YEATS2Q9ULM3 1422 aa19.02■□□□□ 0.64
LSM8-201ENST00000249299 MPHOSPH9Q99550 1183 aa19.01■□□□□ 0.63
LSM8-201ENST00000249299 ABCA6Q8N139 1617 aa19.01■□□□□ 0.63
LSM8-201ENST00000249299 UNC13BO14795 1591 aa19.01■□□□□ 0.63
LSM8-201ENST00000249299 NUP155O75694 1391 aa19.01■□□□□ 0.63
LSM8-201ENST00000249299 ZEB1P37275 1124 aaPredicted RBP19■□□□□ 0.63
LSM8-201ENST00000249299 BCORL1Q5H9F3 1711 aa19■□□□□ 0.63
LSM8-201ENST00000249299 AGLP35573 1532 aa18.99■□□□□ 0.63
LSM8-201ENST00000249299 ARHGEF40Q8TER5 1519 aa18.99■□□□□ 0.63
LSM8-201ENST00000249299 KIF3BO15066 747 aa18.99■□□□□ 0.63
LSM8-201ENST00000249299 KANK1Q14678 1352 aa18.98■□□□□ 0.63
LSM8-201ENST00000249299 DEPDC5O75140 1603 aa18.97■□□□□ 0.63
LSM8-201ENST00000249299 PZPP20742 1482 aa18.97■□□□□ 0.63
LSM8-201ENST00000249299 RNF17Q9BXT8 1623 aaKnown RBP18.95■□□□□ 0.62
LSM8-201ENST00000249299 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
LSM8-201ENST00000249299 VWDEQ8N2E2 1590 aa18.94■□□□□ 0.62
LSM8-201ENST00000249299 FAM135AQ9P2D6 1515 aa18.93■□□□□ 0.62
LSM8-201ENST00000249299 IQGAP3Q86VI3 1631 aa18.93■□□□□ 0.62
LSM8-201ENST00000249299 LMTK2Q8IWU2 1503 aa18.91■□□□□ 0.62
LSM8-201ENST00000249299 TIMELESSQ9UNS1 1208 aa18.9■□□□□ 0.62
LSM8-201ENST00000249299 PKD2Q13563 968 aa18.89■□□□□ 0.61
LSM8-201ENST00000249299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.612e-9■□□□□ 9.3
LSM8-201ENST00000249299 MROH1Q8NDA8 1641 aa18.88■□□□□ 0.61
LSM8-201ENST00000249299 ANKRD30BQ9BXX2 1392 aa18.87■□□□□ 0.61
LSM8-201ENST00000249299 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
LSM8-201ENST00000249299 GGT6Q6P531 493 aa18.85■□□□□ 0.61
LSM8-201ENST00000249299 RPRD2Q5VT52 1461 aaKnown RBP18.84■□□□□ 0.61
LSM8-201ENST00000249299 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.61
LSM8-201ENST00000249299 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.6
LSM8-201ENST00000249299 TET3O43151 1660 aa18.82■□□□□ 0.6
LSM8-201ENST00000249299 ZC3H13Q5T200 1668 aaKnown RBP18.81■□□□□ 0.6
LSM8-201ENST00000249299 ABCC3O15438 1527 aa18.81■□□□□ 0.6
LSM8-201ENST00000249299 PTPRTO14522 1441 aa18.8■□□□□ 0.6
LSM8-201ENST00000249299 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
LSM8-201ENST00000249299 CNTLNQ9NXG0 1405 aa18.78■□□□□ 0.6
LSM8-201ENST00000249299 ARID4BQ4LE39 1312 aaPredicted RBP18.76■□□□□ 0.59
LSM8-201ENST00000249299 ZBTB22O15209 634 aa18.74■□□□□ 0.59
LSM8-201ENST00000249299 NPATQ14207 1427 aa18.73■□□□□ 0.59
LSM8-201ENST00000249299 PLA2R1Q13018 1463 aa18.73■□□□□ 0.59
LSM8-201ENST00000249299 CCDC144AA2RUR9 1427 aa18.73■□□□□ 0.59
LSM8-201ENST00000249299 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
LSM8-201ENST00000249299 ESF1Q9H501 851 aaKnown RBP18.73■□□□□ 0.59
LSM8-201ENST00000249299 E9PCH4 1651 aa18.71■□□□□ 0.59
LSM8-201ENST00000249299 TRPM2O94759 1503 aa18.71■□□□□ 0.59
LSM8-201ENST00000249299 SIGLEC1Q9BZZ2 1709 aa18.71■□□□□ 0.59
LSM8-201ENST00000249299 NOS1P29475 1434 aa18.7■□□□□ 0.58
LSM8-201ENST00000249299 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
LSM8-201ENST00000249299 NEUROD1Q13562 356 aa18.69■□□□□ 0.58
LSM8-201ENST00000249299 CAMSAP1Q5T5Y3 1602 aa18.69■□□□□ 0.58
LSM8-201ENST00000249299 NEURL4Q96JN8 1562 aa18.67■□□□□ 0.58
LSM8-201ENST00000249299 CEP152O94986 1710 aa18.67■□□□□ 0.58
LSM8-201ENST00000249299 MLECQ14165 292 aa18.67■□□□□ 0.58
LSM8-201ENST00000249299 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
LSM8-201ENST00000249299 SLC52A1Q9NWF4 448 aa18.67■□□□□ 0.58
LSM8-201ENST00000249299 ZMYM3Q14202 1370 aa18.66■□□□□ 0.58
LSM8-201ENST00000249299 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
LSM8-201ENST00000249299 MROH2AA6NES4 1674 aa18.63■□□□□ 0.57
LSM8-201ENST00000249299 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
LSM8-201ENST00000249299 ERVK-7P63135 1459 aa18.61■□□□□ 0.57
LSM8-201ENST00000249299 SPATA31D1Q6ZQQ2 1576 aa18.6■□□□□ 0.57
LSM8-201ENST00000249299 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
LSM8-201ENST00000249299 SPATA31E1Q6ZUB1 1445 aa18.6■□□□□ 0.57
LSM8-201ENST00000249299 L3MBTL2Q969R5 705 aa18.59■□□□□ 0.57
LSM8-201ENST00000249299 RNF39Q9H2S5 420 aa18.58■□□□□ 0.57
LSM8-201ENST00000249299 FOXD4L1Q9NU39 408 aa18.56■□□□□ 0.56
LSM8-201ENST00000249299 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
LSM8-201ENST00000249299 PREX1Q8TCU6 1659 aa18.55■□□□□ 0.56
LSM8-201ENST00000249299 PIK3C2BO00750 1634 aa18.55■□□□□ 0.56
LSM8-201ENST00000249299 SYNMO15061 1565 aa18.55■□□□□ 0.56
LSM8-201ENST00000249299 RPGRIP1LQ68CZ1 1315 aa18.55■□□□□ 0.56
LSM8-201ENST00000249299 ADAMTSL3P82987 1691 aa18.55■□□□□ 0.56
LSM8-201ENST00000249299 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
LSM8-201ENST00000249299 IDI1Q13907 227 aa18.53■□□□□ 0.56
LSM8-201ENST00000249299 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
LSM8-201ENST00000249299 FER1L4A9Z1Z3 1794 aa18.52■□□□□ 0.55
LSM8-201ENST00000249299 TNRQ92752 1358 aa18.51■□□□□ 0.55
LSM8-201ENST00000249299 ADGRB3O60242 1522 aa18.51■□□□□ 0.55
LSM8-201ENST00000249299 NLRP1Q9C000 1473 aa18.51■□□□□ 0.55
LSM8-201ENST00000249299 UGGT1Q9NYU2 1555 aa18.48■□□□□ 0.55
LSM8-201ENST00000249299 RGL3Q3MIN7 710 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms