RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
SGPP1-201ENST00000247225 BRD4O60885 1362 aaPredicted RBP22.12■■□□□ 1.13
SGPP1-201ENST00000247225 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
SGPP1-201ENST00000247225 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
SGPP1-201ENST00000247225 CANXP27824 592 aaKnown RBP22.1■■□□□ 1.13
SGPP1-201ENST00000247225 CAMSAP2Q08AD1 1489 aa22.1■■□□□ 1.13
SGPP1-201ENST00000247225 BCORL1Q5H9F3 1711 aa22.1■■□□□ 1.13
SGPP1-201ENST00000247225 NUP153P49790 1475 aaKnown RBP22.09■■□□□ 1.13
SGPP1-201ENST00000247225 PPM1GO15355 546 aaPredicted RBP22.08■■□□□ 1.13
SGPP1-201ENST00000247225 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
SGPP1-201ENST00000247225 TMF1P82094 1093 aa22.06■■□□□ 1.12
SGPP1-201ENST00000247225 NFKBIBQ15653 356 aa22.05■■□□□ 1.12
SGPP1-201ENST00000247225 FRAT1Q92837 279 aaPredicted RBP22.05■■□□□ 1.12
SGPP1-201ENST00000247225 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
SGPP1-201ENST00000247225 SPRYD3Q8NCJ5 442 aa22.04■■□□□ 1.12
SGPP1-201ENST00000247225 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
SGPP1-201ENST00000247225 WDR62O43379 1518 aa22.03■■□□□ 1.12
SGPP1-201ENST00000247225 ABCA5Q8WWZ7 1642 aa22.03■■□□□ 1.12
SGPP1-201ENST00000247225 ARID4BQ4LE39 1312 aaPredicted RBP22.02■■□□□ 1.12
SGPP1-201ENST00000247225 GPATCH8Q9UKJ3 1502 aaKnown RBP22.02■■□□□ 1.12
SGPP1-201ENST00000247225 DDRGK1Q96HY6 314 aa22.02■■□□□ 1.12
SGPP1-201ENST00000247225 PER1O15534 1290 aaPredicted RBP22.01■■□□□ 1.11
SGPP1-201ENST00000247225 APAF1O14727 1248 aa22.01■■□□□ 1.11
SGPP1-201ENST00000247225 BCAR3O75815 825 aa22.01■■□□□ 1.11
SGPP1-201ENST00000247225 DISP3Q9P2K9 1392 aa22.01■■□□□ 1.11
SGPP1-201ENST00000247225 SLKQ9H2G2 1235 aaPredicted RBP22.01■■□□□ 1.11
SGPP1-201ENST00000247225 LRPPRCP42704 1394 aaKnown RBP22■■□□□ 1.11
SGPP1-201ENST00000247225 CCDC144AA2RUR9 1427 aa22■■□□□ 1.11
SGPP1-201ENST00000247225 C9orf84Q5VXU9 1444 aa22■■□□□ 1.11
SGPP1-201ENST00000247225 FRAT2O75474 233 aaPredicted RBP22■■□□□ 1.11
SGPP1-201ENST00000247225 MS4A1P11836 297 aa21.99■■□□□ 1.11
SGPP1-201ENST00000247225 RRP7AQ9Y3A4 280 aaKnown RBP21.98■■□□□ 1.11
SGPP1-201ENST00000247225 CHGAP10645 457 aaKnown RBP21.98■■□□□ 1.11
SGPP1-201ENST00000247225 GOLGA2Q08379 1002 aa21.97■■□□□ 1.11
SGPP1-201ENST00000247225 GSE1Q14687 1217 aa21.97■■□□□ 1.11
SGPP1-201ENST00000247225 BCL2L13Q9BXK5 485 aa21.97■■□□□ 1.11
SGPP1-201ENST00000247225 PPP2R1AP30153 589 aa21.93■■□□□ 1.1
SGPP1-201ENST00000247225 DNMT1P26358 1616 aaKnown RBP21.93■■□□□ 1.1
SGPP1-201ENST00000247225 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.93■■□□□ 1.1
SGPP1-201ENST00000247225 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
SGPP1-201ENST00000247225 CLUAP1Q96AJ1 413 aa21.93■■□□□ 1.1
SGPP1-201ENST00000247225 SPINK5Q9NQ38 1064 aaPredicted RBP21.93■■□□□ 1.1
SGPP1-201ENST00000247225 COG6Q9Y2V7 657 aa21.92■■□□□ 1.1
SGPP1-201ENST00000247225 TESK2Q96S53 571 aa21.91■■□□□ 1.1
SGPP1-201ENST00000247225 FAM161AQ3B820 660 aa21.91■■□□□ 1.1
SGPP1-201ENST00000247225 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
SGPP1-201ENST00000247225 PANK1Q8TE04 598 aa21.9■■□□□ 1.1
SGPP1-201ENST00000247225 DUSP27Q5VZP5 1158 aa21.88■■□□□ 1.09
SGPP1-201ENST00000247225 CENPQQ7L2Z9 268 aaPredicted RBP21.88■■□□□ 1.09
SGPP1-201ENST00000247225 RALGAPBQ86X10 1494 aa21.88■■□□□ 1.09
SGPP1-201ENST00000247225 PARD3Q8TEW0 1356 aa21.88■■□□□ 1.09
SGPP1-201ENST00000247225 KIF21AQ7Z4S6 1674 aa21.88■■□□□ 1.09
SGPP1-201ENST00000247225 USP35Q9P2H5 1018 aa21.88■■□□□ 1.09
SGPP1-201ENST00000247225 KIF14Q15058 1648 aa21.87■■□□□ 1.09
SGPP1-201ENST00000247225 PLEKHH1Q9ULM0 1364 aa21.87■■□□□ 1.09
SGPP1-201ENST00000247225 PRKCSHP14314 528 aaPredicted RBP21.87■■□□□ 1.09
SGPP1-201ENST00000247225 KDM5CP41229 1560 aa21.87■■□□□ 1.09
SGPP1-201ENST00000247225 CARMIL2Q6F5E8 1435 aa21.85■■□□□ 1.09
SGPP1-201ENST00000247225 MBD5Q9P267 1494 aa21.85■■□□□ 1.09
SGPP1-201ENST00000247225 DMRT2Q9Y5R5 561 aa21.85■■□□□ 1.09
SGPP1-201ENST00000247225 IGHDP01880 384 aa21.83■■□□□ 1.08
SGPP1-201ENST00000247225 C8orf34Q49A92 452 aa21.82■■□□□ 1.08
SGPP1-201ENST00000247225 GZF1Q9H116 711 aaPredicted RBP21.82■■□□□ 1.08
SGPP1-201ENST00000247225 TARBP1Q13395 1621 aaKnown RBP21.82■■□□□ 1.08
SGPP1-201ENST00000247225 SEC24BO95487 1268 aa21.81■■□□□ 1.08
SGPP1-201ENST00000247225 ERBINQ96RT1 1412 aa21.81■■□□□ 1.08
SGPP1-201ENST00000247225 RAPGEF6Q8TEU7 1601 aa21.81■■□□□ 1.08
SGPP1-201ENST00000247225 ADAMTS12P58397 1594 aa21.79■■□□□ 1.08
SGPP1-201ENST00000247225 ERCC6Q03468 1493 aa21.79■■□□□ 1.08
SGPP1-201ENST00000247225 KIAA0556O60303 1618 aa21.79■■□□□ 1.08
SGPP1-201ENST00000247225 GRIN2AQ12879 1464 aa21.78■■□□□ 1.08
SGPP1-201ENST00000247225 TNNQ9UQP3 1299 aa21.78■■□□□ 1.08
SGPP1-201ENST00000247225 NUTM2DQ5VT03 806 aaPredicted RBP21.78■■□□□ 1.08
SGPP1-201ENST00000247225 UHRF1BP1Q6BDS2 1440 aa21.77■■□□□ 1.08
SGPP1-201ENST00000247225 PRAG1Q86YV5 1406 aa21.77■■□□□ 1.07
SGPP1-201ENST00000247225 SAFB2Q14151 953 aaKnown RBP eCLIP21.76■■□□□ 1.07
SGPP1-201ENST00000247225 SLFN5Q08AF3 891 aa21.75■■□□□ 1.07
SGPP1-201ENST00000247225 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
SGPP1-201ENST00000247225 AFAP1Q8N556 730 aa21.75■■□□□ 1.07
SGPP1-201ENST00000247225 POGKQ9P215 609 aa21.75■■□□□ 1.07
SGPP1-201ENST00000247225 MRC2Q9UBG0 1479 aa21.74■■□□□ 1.07
SGPP1-201ENST00000247225 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
SGPP1-201ENST00000247225 KDM2BQ8NHM5 1336 aa21.73■■□□□ 1.07
SGPP1-201ENST00000247225 PTPRGP23470 1445 aa21.72■■□□□ 1.07
SGPP1-201ENST00000247225 ATP10BO94823 1461 aa21.72■■□□□ 1.07
SGPP1-201ENST00000247225 AMER1Q5JTC6 1135 aaPredicted RBP21.72■■□□□ 1.07
SGPP1-201ENST00000247225 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
SGPP1-201ENST00000247225 PLEKHH2Q8IVE3 1493 aa21.71■■□□□ 1.07
SGPP1-201ENST00000247225 CENPJQ9HC77 1338 aaPredicted RBP21.7■■□□□ 1.06
SGPP1-201ENST00000247225 TRAK1Q9UPV9 953 aa21.7■■□□□ 1.06
SGPP1-201ENST00000247225 MORC1Q86VD1 984 aa21.67■■□□□ 1.06
SGPP1-201ENST00000247225 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
SGPP1-201ENST00000247225 WASHC2CQ9Y4E1 1318 aa21.67■■□□□ 1.06
SGPP1-201ENST00000247225 UPF2Q9HAU5 1272 aaKnown RBP21.67■■□□□ 1.06
SGPP1-201ENST00000247225 KIF3BO15066 747 aa21.66■■□□□ 1.06
SGPP1-201ENST00000247225 A2MP01023 1474 aa21.66■■□□□ 1.06
SGPP1-201ENST00000247225 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
SGPP1-201ENST00000247225 ADGRL2O95490 1459 aa21.65■■□□□ 1.06
SGPP1-201ENST00000247225 FAM135AQ9P2D6 1515 aa21.64■■□□□ 1.06
SGPP1-201ENST00000247225 BECN1Q14457 450 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms