RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 NUP155O75694 1391 aa18.55■□□□□ 0.56
EGR1-201ENST00000239938 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
EGR1-201ENST00000239938 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.55■□□□□ 0.56
EGR1-201ENST00000239938 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
EGR1-201ENST00000239938 SKAP1Q86WV1 359 aa18.54■□□□□ 0.56
EGR1-201ENST00000239938 ADCY10Q96PN6 1610 aa18.54■□□□□ 0.56
EGR1-201ENST00000239938 DCAF11Q8TEB1 546 aa18.53■□□□□ 0.56
EGR1-201ENST00000239938 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
EGR1-201ENST00000239938 CEP170Q5SW79 1584 aa18.52■□□□□ 0.56
EGR1-201ENST00000239938 CDC42BPAQ5VT25 1732 aa18.51■□□□□ 0.55
EGR1-201ENST00000239938 PLIN1O60240 522 aa18.51■□□□□ 0.55
EGR1-201ENST00000239938 PER1O15534 1290 aaPredicted RBP18.51■□□□□ 0.55
EGR1-201ENST00000239938 NLRP13Q86W25 1043 aa18.5■□□□□ 0.55
EGR1-201ENST00000239938 MS4A1P11836 297 aa18.49■□□□□ 0.55
EGR1-201ENST00000239938 KDM5DQ9BY66 1539 aa18.49■□□□□ 0.55
EGR1-201ENST00000239938 NEFMP07197 916 aa18.48■□□□□ 0.55
EGR1-201ENST00000239938 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
EGR1-201ENST00000239938 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
EGR1-201ENST00000239938 C9orf84Q5VXU9 1444 aa18.47■□□□□ 0.55
EGR1-201ENST00000239938 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
EGR1-201ENST00000239938 PTPRGP23470 1445 aa18.46■□□□□ 0.55
EGR1-201ENST00000239938 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
EGR1-201ENST00000239938 NBPF1Q3BBV0 1214 aa18.44■□□□□ 0.54
EGR1-201ENST00000239938 CRBNQ96SW2 442 aa18.44■□□□□ 0.54
EGR1-201ENST00000239938 SHANK2Q9UPX8 1470 aa18.43■□□□□ 0.54
EGR1-201ENST00000239938 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
EGR1-201ENST00000239938 PRAG1Q86YV5 1406 aa18.42■□□□□ 0.54
EGR1-201ENST00000239938 ABCC10Q5T3U5 1492 aa18.42■□□□□ 0.54
EGR1-201ENST00000239938 BLMP54132 1417 aaPredicted RBP18.42■□□□□ 0.54
EGR1-201ENST00000239938 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
EGR1-201ENST00000239938 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
EGR1-201ENST00000239938 IFT140Q96RY7 1462 aa18.41■□□□□ 0.54
EGR1-201ENST00000239938 WASHC2CQ9Y4E1 1318 aa18.4■□□□□ 0.54
EGR1-201ENST00000239938 DISP3Q9P2K9 1392 aa18.39■□□□□ 0.54
EGR1-201ENST00000239938 HNRNPMP52272 730 aaKnown RBP eCLIP18.38■□□□□ 0.538e-6■■■■□ 19.5
EGR1-201ENST00000239938 TESK2Q96S53 571 aa18.38■□□□□ 0.53
EGR1-201ENST00000239938 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
EGR1-201ENST00000239938 COL17A1Q9UMD9 1497 aaPredicted RBP18.36■□□□□ 0.53
EGR1-201ENST00000239938 EIF4G3O43432 1585 aaKnown RBP18.36■□□□□ 0.53
EGR1-201ENST00000239938 KDM2BQ8NHM5 1336 aa18.35■□□□□ 0.53
EGR1-201ENST00000239938 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
EGR1-201ENST00000239938 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
EGR1-201ENST00000239938 RGL3Q3MIN7 710 aa18.35■□□□□ 0.53
EGR1-201ENST00000239938 GPRASP1Q5JY77 1395 aa18.35■□□□□ 0.53
EGR1-201ENST00000239938 TSPY4P0CV99 314 aa18.35■□□□□ 0.53
EGR1-201ENST00000239938 TSPY10P0CW01 314 aa18.35■□□□□ 0.53
EGR1-201ENST00000239938 FBLN2P98095 1184 aa18.35■□□□□ 0.53
EGR1-201ENST00000239938 PANK3Q9H999 370 aa18.35■□□□□ 0.53
EGR1-201ENST00000239938 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
EGR1-201ENST00000239938 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
EGR1-201ENST00000239938 ZMYM4Q5VZL5 1548 aa18.34■□□□□ 0.53
EGR1-201ENST00000239938 INSRP06213 1382 aa18.34■□□□□ 0.53
EGR1-201ENST00000239938 PLEKHD1A6NEE1 506 aa18.33■□□□□ 0.53
EGR1-201ENST00000239938 ABCA8O94911 1581 aa18.33■□□□□ 0.53
EGR1-201ENST00000239938 ATP10BO94823 1461 aa18.33■□□□□ 0.52
EGR1-201ENST00000239938 A2MP01023 1474 aa18.33■□□□□ 0.52
EGR1-201ENST00000239938 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
EGR1-201ENST00000239938 BRPF3Q9ULD4 1205 aa18.32■□□□□ 0.52
EGR1-201ENST00000239938 ADAMTS8Q9UP79 889 aa18.31■□□□□ 0.52
EGR1-201ENST00000239938 CCDC144AA2RUR9 1427 aa18.3■□□□□ 0.52
EGR1-201ENST00000239938 ARHGEF5Q12774 1597 aa18.3■□□□□ 0.52
EGR1-201ENST00000239938 NFKBIBQ15653 356 aa18.29■□□□□ 0.52
EGR1-201ENST00000239938 DDRGK1Q96HY6 314 aa18.29■□□□□ 0.52
EGR1-201ENST00000239938 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
EGR1-201ENST00000239938 PLEKHH1Q9ULM0 1364 aa18.29■□□□□ 0.52
EGR1-201ENST00000239938 ERBINQ96RT1 1412 aa18.29■□□□□ 0.52
EGR1-201ENST00000239938 LAMC1P11047 1609 aa18.28■□□□□ 0.52
EGR1-201ENST00000239938 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
EGR1-201ENST00000239938 DUSP27Q5VZP5 1158 aa18.27■□□□□ 0.52
EGR1-201ENST00000239938 MYO5CQ9NQX4 1742 aa18.27■□□□□ 0.52
EGR1-201ENST00000239938 PLEKHH2Q8IVE3 1493 aa18.27■□□□□ 0.52
EGR1-201ENST00000239938 C8orf34Q49A92 452 aa18.27■□□□□ 0.51
EGR1-201ENST00000239938 SAMD9LQ8IVG5 1584 aa18.26■□□□□ 0.51
EGR1-201ENST00000239938 GSE1Q14687 1217 aa18.26■□□□□ 0.51
EGR1-201ENST00000239938 CARMIL2Q6F5E8 1435 aa18.26■□□□□ 0.51
EGR1-201ENST00000239938 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
EGR1-201ENST00000239938 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
EGR1-201ENST00000239938 MAGI2Q86UL8 1455 aa18.24■□□□□ 0.51
EGR1-201ENST00000239938 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
EGR1-201ENST00000239938 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
EGR1-201ENST00000239938 CENPQQ7L2Z9 268 aaPredicted RBP18.23■□□□□ 0.51
EGR1-201ENST00000239938 FRAT1Q92837 279 aaPredicted RBP18.22■□□□□ 0.51
EGR1-201ENST00000239938 NUP160Q12769 1436 aa18.21■□□□□ 0.51
EGR1-201ENST00000239938 WDR7Q9Y4E6 1490 aa18.21■□□□□ 0.51
EGR1-201ENST00000239938 EIF5BO60841 1220 aaKnown RBP18.21■□□□□ 0.51
EGR1-201ENST00000239938 TMF1P82094 1093 aa18.21■□□□□ 0.51
EGR1-201ENST00000239938 UNC13BO14795 1591 aa18.21■□□□□ 0.51
EGR1-201ENST00000239938 PPP2R1AP30153 589 aa18.21■□□□□ 0.5
EGR1-201ENST00000239938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.54e-7■■□□□ 12.6
EGR1-201ENST00000239938 FAM161AQ3B820 660 aa18.2■□□□□ 0.5
EGR1-201ENST00000239938 PREX2Q70Z35 1606 aa18.17■□□□□ 0.5
EGR1-201ENST00000239938 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
EGR1-201ENST00000239938 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
EGR1-201ENST00000239938 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
EGR1-201ENST00000239938 RNF17Q9BXT8 1623 aaKnown RBP18.16■□□□□ 0.5
EGR1-201ENST00000239938 SYCP2Q9BX26 1530 aa18.15■□□□□ 0.5
EGR1-201ENST00000239938 GOLGA2Q08379 1002 aa18.15■□□□□ 0.5
EGR1-201ENST00000239938 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
EGR1-201ENST00000239938 FRAT2O75474 233 aaPredicted RBP18.15■□□□□ 0.5
EGR1-201ENST00000239938 RGS3P49796 1198 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms