RNA–Protein interactions for RNA: ENST00000239367.6

LRP11-201, Transcript of LDL receptor related protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP11, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-201ENST00000239367 SHANK2Q9UPX8 1470 aa21.8■■□□□ 1.08
LRP11-201ENST00000239367 LRPPRCP42704 1394 aaKnown RBP21.78■■□□□ 1.08
LRP11-201ENST00000239367 KDM5DQ9BY66 1539 aa21.78■■□□□ 1.08
LRP11-201ENST00000239367 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.08
LRP11-201ENST00000239367 BRD4O60885 1362 aaPredicted RBP21.77■■□□□ 1.08
LRP11-201ENST00000239367 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
LRP11-201ENST00000239367 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
LRP11-201ENST00000239367 RALBP1Q15311 655 aa21.75■■□□□ 1.07
LRP11-201ENST00000239367 NUP155O75694 1391 aa21.74■■□□□ 1.07
LRP11-201ENST00000239367 EIF4G3O43432 1585 aaKnown RBP21.74■■□□□ 1.07
LRP11-201ENST00000239367 MYBBP1AQ9BQG0 1328 aaKnown RBP21.74■■□□□ 1.07
LRP11-201ENST00000239367 MAGI1Q96QZ7 1491 aaPredicted RBP21.72■■□□□ 1.07
LRP11-201ENST00000239367 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
LRP11-201ENST00000239367 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
LRP11-201ENST00000239367 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
LRP11-201ENST00000239367 CEP170Q5SW79 1584 aa21.7■■□□□ 1.07
LRP11-201ENST00000239367 PPM1GO15355 546 aaPredicted RBP21.7■■□□□ 1.07
LRP11-201ENST00000239367 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.06
LRP11-201ENST00000239367 PTPRGP23470 1445 aa21.69■■□□□ 1.06
LRP11-201ENST00000239367 E9PCH4 1651 aa21.69■■□□□ 1.06
LRP11-201ENST00000239367 ABCC10Q5T3U5 1492 aa21.68■■□□□ 1.06
LRP11-201ENST00000239367 ST20-MTHFSA0A0A6YYL1 179 aa21.68■■□□□ 1.06
LRP11-201ENST00000239367 FRAT1Q92837 279 aaPredicted RBP21.67■■□□□ 1.06
LRP11-201ENST00000239367 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
LRP11-201ENST00000239367 GSE1Q14687 1217 aa21.67■■□□□ 1.06
LRP11-201ENST00000239367 RCAN3Q9UKA8 241 aa21.67■■□□□ 1.06
LRP11-201ENST00000239367 PLEKHD1A6NEE1 506 aa21.66■■□□□ 1.06
LRP11-201ENST00000239367 TCERG1O14776 1098 aaKnown RBP21.66■■□□□ 1.06
LRP11-201ENST00000239367 TSPY4P0CV99 314 aa21.65■■□□□ 1.06
LRP11-201ENST00000239367 TSPY10P0CW01 314 aa21.65■■□□□ 1.06
LRP11-201ENST00000239367 RRP1P56182 461 aaKnown RBP21.65■■□□□ 1.06
LRP11-201ENST00000239367 NFKBIBQ15653 356 aa21.64■■□□□ 1.06
LRP11-201ENST00000239367 CHMP7Q8WUX9 453 aaPredicted RBP21.64■■□□□ 1.06
LRP11-201ENST00000239367 CDCA7LQ96GN5 454 aa21.64■■□□□ 1.05
LRP11-201ENST00000239367 PDE3BQ13370 1112 aa21.63■■□□□ 1.05
LRP11-201ENST00000239367 BACH2Q9BYV9 841 aa21.63■■□□□ 1.05
LRP11-201ENST00000239367 ARHGEF5Q12774 1597 aa21.63■■□□□ 1.05
LRP11-201ENST00000239367 DCAF11Q8TEB1 546 aa21.62■■□□□ 1.05
LRP11-201ENST00000239367 ABCA8O94911 1581 aa21.62■■□□□ 1.05
LRP11-201ENST00000239367 RGS3P49796 1198 aa21.62■■□□□ 1.05
LRP11-201ENST00000239367 JPH4Q96JJ6 628 aa21.61■■□□□ 1.05
LRP11-201ENST00000239367 NUP160Q12769 1436 aa21.61■■□□□ 1.05
LRP11-201ENST00000239367 NLRP13Q86W25 1043 aa21.61■■□□□ 1.05
LRP11-201ENST00000239367 PARD3Q8TEW0 1356 aa21.6■■□□□ 1.05
LRP11-201ENST00000239367 ATP10BO94823 1461 aa21.59■■□□□ 1.05
LRP11-201ENST00000239367 INSRP06213 1382 aa21.57■■□□□ 1.04
LRP11-201ENST00000239367 USP35Q9P2H5 1018 aa21.57■■□□□ 1.04
LRP11-201ENST00000239367 UBE2Q2Q8WVN8 375 aa21.56■■□□□ 1.04
LRP11-201ENST00000239367 TRPM1Q7Z4N2 1603 aa21.56■■□□□ 1.04
LRP11-201ENST00000239367 WASHC2CQ9Y4E1 1318 aa21.56■■□□□ 1.04
LRP11-201ENST00000239367 PRAG1Q86YV5 1406 aa21.55■■□□□ 1.04
LRP11-201ENST00000239367 CRBNQ96SW2 442 aa21.55■■□□□ 1.04
LRP11-201ENST00000239367 ZMYM4Q5VZL5 1548 aa21.55■■□□□ 1.04
LRP11-201ENST00000239367 FAM135AQ9P2D6 1515 aa21.55■■□□□ 1.04
LRP11-201ENST00000239367 FRAT2O75474 233 aaPredicted RBP21.54■■□□□ 1.04
LRP11-201ENST00000239367 RSPH4AQ5TD94 716 aa21.53■■□□□ 1.04
LRP11-201ENST00000239367 GPRASP1Q5JY77 1395 aa21.53■■□□□ 1.04
LRP11-201ENST00000239367 PER1O15534 1290 aaPredicted RBP21.52■■□□□ 1.04
LRP11-201ENST00000239367 DDRGK1Q96HY6 314 aa21.52■■□□□ 1.04
LRP11-201ENST00000239367 CCDC141Q6ZP82 1450 aa21.51■■□□□ 1.03
LRP11-201ENST00000239367 LAMC1P11047 1609 aa21.51■■□□□ 1.03
LRP11-201ENST00000239367 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
LRP11-201ENST00000239367 HNRNPMP52272 730 aaKnown RBP eCLIP21.51■■□□□ 1.03
LRP11-201ENST00000239367 CC2D1BQ5T0F9 858 aaKnown RBP21.51■■□□□ 1.03
LRP11-201ENST00000239367 MS4A1P11836 297 aa21.5■■□□□ 1.03
LRP11-201ENST00000239367 FBLN2P98095 1184 aa21.47■■□□□ 1.03
LRP11-201ENST00000239367 COL17A1Q9UMD9 1497 aaPredicted RBP21.47■■□□□ 1.03
LRP11-201ENST00000239367 BLMP54132 1417 aaPredicted RBP21.46■■□□□ 1.03
LRP11-201ENST00000239367 SAMD9LQ8IVG5 1584 aa21.46■■□□□ 1.03
LRP11-201ENST00000239367 C20orf194Q5TEA3 1177 aa21.46■■□□□ 1.03
LRP11-201ENST00000239367 PRDM15P57071 1507 aaPredicted RBP21.45■■□□□ 1.02
LRP11-201ENST00000239367 UNC13BO14795 1591 aa21.44■■□□□ 1.02
LRP11-201ENST00000239367 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
LRP11-201ENST00000239367 SLKQ9H2G2 1235 aaPredicted RBP21.44■■□□□ 1.02
LRP11-201ENST00000239367 PLEKHH2Q8IVE3 1493 aa21.43■■□□□ 1.02
LRP11-201ENST00000239367 MAST1Q9Y2H9 1570 aa21.42■■□□□ 1.02
LRP11-201ENST00000239367 A2MP01023 1474 aa21.42■■□□□ 1.02
LRP11-201ENST00000239367 EIF2AK4Q9P2K8 1649 aaKnown RBP21.42■■□□□ 1.02
LRP11-201ENST00000239367 PLA2R1Q13018 1463 aa21.41■■□□□ 1.02
LRP11-201ENST00000239367 NBPF1Q3BBV0 1214 aa21.41■■□□□ 1.02
LRP11-201ENST00000239367 TESK2Q96S53 571 aa21.41■■□□□ 1.02
LRP11-201ENST00000239367 CDC42BPBQ9Y5S2 1711 aa21.41■■□□□ 1.02
LRP11-201ENST00000239367 SPRYD3Q8NCJ5 442 aa21.41■■□□□ 1.02
LRP11-201ENST00000239367 ERCC6Q03468 1493 aa21.39■■□□□ 1.01
LRP11-201ENST00000239367 ERBINQ96RT1 1412 aa21.38■■□□□ 1.01
LRP11-201ENST00000239367 DISP3Q9P2K9 1392 aa21.38■■□□□ 1.01
LRP11-201ENST00000239367 RGL3Q3MIN7 710 aa21.38■■□□□ 1.01
LRP11-201ENST00000239367 ATP10AO60312 1499 aa21.37■■□□□ 1.01
LRP11-201ENST00000239367 IQGAP3Q86VI3 1631 aa21.36■■□□□ 1.01
LRP11-201ENST00000239367 TMF1P82094 1093 aa21.36■■□□□ 1.01
LRP11-201ENST00000239367 PANK3Q9H999 370 aa21.36■■□□□ 1.01
LRP11-201ENST00000239367 GZF1Q9H116 711 aaPredicted RBP21.35■■□□□ 1.01
LRP11-201ENST00000239367 PLXNC1O60486 1568 aa21.34■■□□□ 1.01
LRP11-201ENST00000239367 NAP1L5Q96NT1 182 aaPredicted RBP21.33■■□□□ 1.01
LRP11-201ENST00000239367 SYCP2Q9BX26 1530 aa21.33■■□□□ 1.01
LRP11-201ENST00000239367 MYO5CQ9NQX4 1742 aa21.32■■□□□ 1
LRP11-201ENST00000239367 POGKQ9P215 609 aa21.32■■□□□ 1
LRP11-201ENST00000239367 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
LRP11-201ENST00000239367 RNF17Q9BXT8 1623 aaKnown RBP21.29■■□□□ 1
LRP11-201ENST00000239367 ARHGAP5Q13017 1502 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms