RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
TRIM23-201ENST00000231524 PANK3Q9H999 370 aa12.41□□□□□ -0.42
TRIM23-201ENST00000231524 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
TRIM23-201ENST00000231524 BRD4O60885 1362 aaPredicted RBP12.41□□□□□ -0.42
TRIM23-201ENST00000231524 ZBTB7CA1YPR0 619 aa12.4□□□□□ -0.42
TRIM23-201ENST00000231524 COG6Q9Y2V7 657 aa12.4□□□□□ -0.42
TRIM23-201ENST00000231524 MYOM3Q5VTT5 1437 aa12.39□□□□□ -0.43
TRIM23-201ENST00000231524 HNRNPMP52272 730 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRIM23-201ENST00000231524 NUP155O75694 1391 aa12.39□□□□□ -0.43
TRIM23-201ENST00000231524 NAIPQ13075 1403 aa12.39□□□□□ -0.43
TRIM23-201ENST00000231524 C20orf194Q5TEA3 1177 aa12.39□□□□□ -0.43
TRIM23-201ENST00000231524 GBP4Q96PP9 640 aa12.39□□□□□ -0.43
TRIM23-201ENST00000231524 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
TRIM23-201ENST00000231524 NCOA1Q15788 1441 aa12.38□□□□□ -0.43
TRIM23-201ENST00000231524 MAPK8IP3Q9UPT6 1336 aa12.38□□□□□ -0.43
TRIM23-201ENST00000231524 IFT140Q96RY7 1462 aa12.38□□□□□ -0.43
TRIM23-201ENST00000231524 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
TRIM23-201ENST00000231524 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
TRIM23-201ENST00000231524 PTPRGP23470 1445 aa12.37□□□□□ -0.43
TRIM23-201ENST00000231524 RWDD1Q9H446 243 aaPredicted RBP12.37□□□□□ -0.43
TRIM23-201ENST00000231524 ZMYND15Q9H091 742 aa12.37□□□□□ -0.43
TRIM23-201ENST00000231524 ZNF644Q9H582 1327 aaPredicted RBP12.37□□□□□ -0.43
TRIM23-201ENST00000231524 ZNF608Q9ULD9 1512 aaPredicted RBP12.36□□□□□ -0.43
TRIM23-201ENST00000231524 PMFBP1Q8TBY8 1022 aa12.36□□□□□ -0.43
TRIM23-201ENST00000231524 ADAMTS8Q9UP79 889 aa12.36□□□□□ -0.43
TRIM23-201ENST00000231524 TPRNQ4KMQ1 711 aa12.36□□□□□ -0.43
TRIM23-201ENST00000231524 CENPJQ9HC77 1338 aaPredicted RBP12.35□□□□□ -0.43
TRIM23-201ENST00000231524 APAF1O14727 1248 aa12.35□□□□□ -0.43
TRIM23-201ENST00000231524 TRAK2O60296 914 aa12.35□□□□□ -0.43
TRIM23-201ENST00000231524 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
TRIM23-201ENST00000231524 DDX11L8A8MPP1 907 aa12.34□□□□□ -0.43
TRIM23-201ENST00000231524 MRE11P49959 708 aa12.34□□□□□ -0.43
TRIM23-201ENST00000231524 FAM13BQ9NYF5 915 aa12.34□□□□□ -0.43
TRIM23-201ENST00000231524 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
TRIM23-201ENST00000231524 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
TRIM23-201ENST00000231524 CASKIN1Q8WXD9 1431 aa12.34□□□□□ -0.43
TRIM23-201ENST00000231524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIM23-201ENST00000231524 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.43
TRIM23-201ENST00000231524 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
TRIM23-201ENST00000231524 RRP9O43818 475 aaKnown RBP12.33□□□□□ -0.44
TRIM23-201ENST00000231524 CGNL1Q0VF96 1302 aa12.33□□□□□ -0.44
TRIM23-201ENST00000231524 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
TRIM23-201ENST00000231524 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
TRIM23-201ENST00000231524 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
TRIM23-201ENST00000231524 RRP7AQ9Y3A4 280 aaKnown RBP12.3□□□□□ -0.44
TRIM23-201ENST00000231524 RNF123Q5XPI4 1314 aa12.3□□□□□ -0.44
TRIM23-201ENST00000231524 ESPNB1AK53 854 aa12.3□□□□□ -0.44
TRIM23-201ENST00000231524 BCAR3O75815 825 aa12.3□□□□□ -0.44
TRIM23-201ENST00000231524 CFAP53Q96M91 514 aa12.29□□□□□ -0.44
TRIM23-201ENST00000231524 MCM4P33991 863 aa12.29□□□□□ -0.44
TRIM23-201ENST00000231524 DDX49Q9Y6V7 483 aaKnown RBP12.29□□□□□ -0.44
TRIM23-201ENST00000231524 E9PSI1 815 aa12.28□□□□□ -0.44
TRIM23-201ENST00000231524 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
TRIM23-201ENST00000231524 FYCO1Q9BQS8 1478 aa12.28□□□□□ -0.44
TRIM23-201ENST00000231524 RBM10P98175 930 aaKnown RBP12.28□□□□□ -0.44
TRIM23-201ENST00000231524 ITPRIPQ8IWB1 547 aa12.28□□□□□ -0.44
TRIM23-201ENST00000231524 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
TRIM23-201ENST00000231524 MAP3K1Q13233 1512 aa12.28□□□□□ -0.44
TRIM23-201ENST00000231524 C22orf23Q9BZE7 217 aa12.27□□□□□ -0.44
TRIM23-201ENST00000231524 RRAGDQ9NQL2 400 aaPredicted RBP12.27□□□□□ -0.44
TRIM23-201ENST00000231524 ANKRD30AQ9BXX3 1397 aa12.27□□□□□ -0.44
TRIM23-201ENST00000231524 A0A0U1RQG5 324 aaPredicted RBP12.27□□□□□ -0.45
TRIM23-201ENST00000231524 CALD1Q05682 793 aaKnown RBP12.27□□□□□ -0.45
TRIM23-201ENST00000231524 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
TRIM23-201ENST00000231524 PRG4Q92954 1404 aaPredicted RBP12.26□□□□□ -0.45
TRIM23-201ENST00000231524 CYB5RLQ6IPT4 315 aa12.26□□□□□ -0.45
TRIM23-201ENST00000231524 GRPEL1Q9HAV7 217 aa12.26□□□□□ -0.45
TRIM23-201ENST00000231524 PTMSP20962 102 aa12.26□□□□□ -0.45
TRIM23-201ENST00000231524 PANK2Q9BZ23 570 aa12.25□□□□□ -0.45
TRIM23-201ENST00000231524 C8orf34Q49A92 452 aa12.25□□□□□ -0.45
TRIM23-201ENST00000231524 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
TRIM23-201ENST00000231524 XRCC6P12956 609 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM23-201ENST00000231524 SKOR2Q2VWA4 1001 aaPredicted RBP12.25□□□□□ -0.45
TRIM23-201ENST00000231524 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
TRIM23-201ENST00000231524 MORC1Q86VD1 984 aa12.25□□□□□ -0.45
TRIM23-201ENST00000231524 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
TRIM23-201ENST00000231524 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
TRIM23-201ENST00000231524 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
TRIM23-201ENST00000231524 GGT6Q6P531 493 aa12.24□□□□□ -0.45
TRIM23-201ENST00000231524 EFCAB5A4FU69 1503 aa12.24□□□□□ -0.45
TRIM23-201ENST00000231524 TPM2P07951 284 aa12.24□□□□□ -0.45
TRIM23-201ENST00000231524 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
TRIM23-201ENST00000231524 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
TRIM23-201ENST00000231524 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
TRIM23-201ENST00000231524 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
TRIM23-201ENST00000231524 NBPF1Q3BBV0 1214 aa12.22□□□□□ -0.45
TRIM23-201ENST00000231524 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
TRIM23-201ENST00000231524 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
TRIM23-201ENST00000231524 NASPP49321 788 aaPredicted RBP12.22□□□□□ -0.45
TRIM23-201ENST00000231524 MLECQ14165 292 aa12.22□□□□□ -0.45
TRIM23-201ENST00000231524 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.22□□□□□ -0.45
TRIM23-201ENST00000231524 CUL7Q14999 1698 aa12.22□□□□□ -0.45
TRIM23-201ENST00000231524 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
TRIM23-201ENST00000231524 CLCN1P35523 988 aa12.21□□□□□ -0.45
TRIM23-201ENST00000231524 TBC1D2Q9BYX2 928 aa12.21□□□□□ -0.45
TRIM23-201ENST00000231524 KIAA0586Q9BVV6 1533 aa12.21□□□□□ -0.46
TRIM23-201ENST00000231524 U2AF1L5P0DN76 240 aaPredicted RBP12.21□□□□□ -0.46
TRIM23-201ENST00000231524 U2AF1Q01081 240 aaKnown RBP eCLIP12.21□□□□□ -0.46
TRIM23-201ENST00000231524 SLC24A1O60721 1099 aa12.2□□□□□ -0.46
TRIM23-201ENST00000231524 IQGAP2Q13576 1575 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms