RNA–Protein interactions for RNA: ENST00000227667.7

APOC3-201, Transcript of apolipoprotein C3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC3, Length 550 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-201ENST00000227667 CCDC18Q5T9S5 1454 aa17.68■□□□□ 0.42
APOC3-201ENST00000227667 POTEAQ6S8J7 498 aa17.67■□□□□ 0.42
APOC3-201ENST00000227667 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
APOC3-201ENST00000227667 POLR1AO95602 1720 aaPredicted RBP17.66■□□□□ 0.42
APOC3-201ENST00000227667 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
APOC3-201ENST00000227667 CDC42BPAQ5VT25 1732 aa17.65■□□□□ 0.42
APOC3-201ENST00000227667 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
APOC3-201ENST00000227667 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
APOC3-201ENST00000227667 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
APOC3-201ENST00000227667 MED14O60244 1454 aa17.63■□□□□ 0.41
APOC3-201ENST00000227667 INO80Q9ULG1 1556 aaPredicted RBP17.63■□□□□ 0.41
APOC3-201ENST00000227667 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
APOC3-201ENST00000227667 KIF3BO15066 747 aa17.62■□□□□ 0.41
APOC3-201ENST00000227667 MIA2Q96PC5 1412 aa17.62■□□□□ 0.41
APOC3-201ENST00000227667 FAM135AQ9P2D6 1515 aa17.62■□□□□ 0.41
APOC3-201ENST00000227667 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
APOC3-201ENST00000227667 PZPP20742 1482 aa17.6■□□□□ 0.41
APOC3-201ENST00000227667 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
APOC3-201ENST00000227667 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
APOC3-201ENST00000227667 NLRP1Q9C000 1473 aa17.58■□□□□ 0.41
APOC3-201ENST00000227667 ZNF644Q9H582 1327 aaPredicted RBP17.57■□□□□ 0.4
APOC3-201ENST00000227667 DEPDC5O75140 1603 aa17.57■□□□□ 0.4
APOC3-201ENST00000227667 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
APOC3-201ENST00000227667 ADGBQ8N7X0 1667 aa17.55■□□□□ 0.4
APOC3-201ENST00000227667 KDM5DQ9BY66 1539 aa17.54■□□□□ 0.4
APOC3-201ENST00000227667 IQGAP1P46940 1657 aa17.53■□□□□ 0.4
APOC3-201ENST00000227667 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
APOC3-201ENST00000227667 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.4
APOC3-201ENST00000227667 STRCP1A6NGW2 1772 aa17.51■□□□□ 0.39
APOC3-201ENST00000227667 SYNMO15061 1565 aa17.51■□□□□ 0.39
APOC3-201ENST00000227667 FAM135BQ49AJ0 1406 aa17.51■□□□□ 0.39
APOC3-201ENST00000227667 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
APOC3-201ENST00000227667 MBD5Q9P267 1494 aa17.5■□□□□ 0.39
APOC3-201ENST00000227667 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
APOC3-201ENST00000227667 TXNDC2Q86VQ3 553 aa17.46■□□□□ 0.39
APOC3-201ENST00000227667 UPF1Q92900 1129 aaKnown RBP eCLIP17.45■□□□□ 0.383e-13■■□□□ 12.2
APOC3-201ENST00000227667 LTKP29376 864 aa17.44■□□□□ 0.38
APOC3-201ENST00000227667 SCAF11Q99590 1463 aaKnown RBP17.44■□□□□ 0.38
APOC3-201ENST00000227667 EID1Q9Y6B2 187 aa17.42■□□□□ 0.38
APOC3-201ENST00000227667 RSPH4AQ5TD94 716 aa17.41■□□□□ 0.38
APOC3-201ENST00000227667 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
APOC3-201ENST00000227667 TMEM94Q12767 1356 aa17.4■□□□□ 0.38
APOC3-201ENST00000227667 TRIM52Q96A61 297 aa17.39■□□□□ 0.37
APOC3-201ENST00000227667 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
APOC3-201ENST00000227667 CCDC141Q6ZP82 1450 aa17.38■□□□□ 0.37
APOC3-201ENST00000227667 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
APOC3-201ENST00000227667 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
APOC3-201ENST00000227667 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
APOC3-201ENST00000227667 ZC3H13Q5T200 1668 aaKnown RBP17.38■□□□□ 0.37
APOC3-201ENST00000227667 ERVK-7P63135 1459 aa17.37■□□□□ 0.37
APOC3-201ENST00000227667 JCADQ9P266 1359 aa17.36■□□□□ 0.37
APOC3-201ENST00000227667 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
APOC3-201ENST00000227667 KCNA6P17658 529 aa17.35■□□□□ 0.37
APOC3-201ENST00000227667 MEX3CQ5U5Q3 659 aaKnown RBP17.35■□□□□ 0.37
APOC3-201ENST00000227667 ZNF772Q68DY9 489 aaPredicted RBP17.35■□□□□ 0.37
APOC3-201ENST00000227667 ABCC3O15438 1527 aa17.34■□□□□ 0.37
APOC3-201ENST00000227667 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
APOC3-201ENST00000227667 SLAIN2Q9P270 581 aa17.34■□□□□ 0.37
APOC3-201ENST00000227667 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.37
APOC3-201ENST00000227667 ARHGAP23Q9P227 1491 aa17.33■□□□□ 0.37
APOC3-201ENST00000227667 XIRP1Q702N8 1843 aaKnown RBP17.33■□□□□ 0.36
APOC3-201ENST00000227667 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
APOC3-201ENST00000227667 SLIT1O75093 1534 aa17.31■□□□□ 0.36
APOC3-201ENST00000227667 SLC26A8Q96RN1 970 aa17.31■□□□□ 0.36
APOC3-201ENST00000227667 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
APOC3-201ENST00000227667 UBR1Q8IWV7 1749 aa17.3■□□□□ 0.36
APOC3-201ENST00000227667 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
APOC3-201ENST00000227667 RXRBP28702 533 aa17.29■□□□□ 0.36
APOC3-201ENST00000227667 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
APOC3-201ENST00000227667 MSH6P52701 1360 aa17.28■□□□□ 0.36
APOC3-201ENST00000227667 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
APOC3-201ENST00000227667 SPATA31A6Q5VVP1 1343 aa17.27■□□□□ 0.36
APOC3-201ENST00000227667 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
APOC3-201ENST00000227667 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
APOC3-201ENST00000227667 BCANQ96GW7 911 aa17.25■□□□□ 0.35
APOC3-201ENST00000227667 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
APOC3-201ENST00000227667 PRDM15P57071 1507 aaPredicted RBP17.23■□□□□ 0.35
APOC3-201ENST00000227667 LRP6O75581 1613 aa17.23■□□□□ 0.35
APOC3-201ENST00000227667 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.34
APOC3-201ENST00000227667 ARHGAP31Q2M1Z3 1444 aa17.2■□□□□ 0.34
APOC3-201ENST00000227667 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
APOC3-201ENST00000227667 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
APOC3-201ENST00000227667 IDI1Q13907 227 aa17.19■□□□□ 0.34
APOC3-201ENST00000227667 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
APOC3-201ENST00000227667 NUTM2BA6NNL0 878 aaPredicted RBP17.18■□□□□ 0.34
APOC3-201ENST00000227667 NUTM2EB1AL46 878 aaPredicted RBP17.18■□□□□ 0.34
APOC3-201ENST00000227667 NUTM2AQ8IVF1 878 aaPredicted RBP17.18■□□□□ 0.34
APOC3-201ENST00000227667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.18■□□□□ 0.34
APOC3-201ENST00000227667 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
APOC3-201ENST00000227667 C14orf37Q86TY3 774 aa17.17■□□□□ 0.34
APOC3-201ENST00000227667 TET3O43151 1660 aa17.16■□□□□ 0.34
APOC3-201ENST00000227667 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
APOC3-201ENST00000227667 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
APOC3-201ENST00000227667 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
APOC3-201ENST00000227667 PIK3C2BO00750 1634 aa17.15■□□□□ 0.34
APOC3-201ENST00000227667 EIF2AK4Q9P2K8 1649 aaKnown RBP17.15■□□□□ 0.34
APOC3-201ENST00000227667 CEP152O94986 1710 aa17.15■□□□□ 0.34
APOC3-201ENST00000227667 AFF2P51816 1311 aa17.15■□□□□ 0.34
APOC3-201ENST00000227667 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
APOC3-201ENST00000227667 ATF3P18847 181 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms