RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 ZNF326Q5BKZ1 582 aaKnown RBP28.84■■■□□ 2.21
CCDC130-201ENST00000221554 NPM1P06748 294 aaKnown RBP eCLIP28.83■■■□□ 2.21
CCDC130-201ENST00000221554 CARD11Q9BXL7 1154 aa28.83■■■□□ 2.21
CCDC130-201ENST00000221554 BCORL1Q5H9F3 1711 aa28.82■■■□□ 2.2
CCDC130-201ENST00000221554 DUOX2Q9NRD8 1548 aa28.81■■■□□ 2.2
CCDC130-201ENST00000221554 PLCH2O75038 1416 aa28.8■■■□□ 2.2
CCDC130-201ENST00000221554 TSHZ2Q9NRE2 1034 aa28.8■■■□□ 2.2
CCDC130-201ENST00000221554 ZBED9Q6R2W3 1325 aa28.8■■■□□ 2.2
CCDC130-201ENST00000221554 DHX29Q7Z478 1369 aaKnown RBP28.79■■■□□ 2.2
CCDC130-201ENST00000221554 CCDC144AA2RUR9 1427 aa28.79■■■□□ 2.2
CCDC130-201ENST00000221554 ERBINQ96RT1 1412 aa28.77■■■□□ 2.2
CCDC130-201ENST00000221554 IQGAP3Q86VI3 1631 aa28.77■■■□□ 2.2
CCDC130-201ENST00000221554 BCANQ96GW7 911 aa28.77■■■□□ 2.2
CCDC130-201ENST00000221554 EFCAB2Q5VUJ9 269 aa28.76■■■□□ 2.19
CCDC130-201ENST00000221554 DCAF11Q8TEB1 546 aa28.76■■■□□ 2.19
CCDC130-201ENST00000221554 ASXL2Q76L83 1435 aa28.76■■■□□ 2.19
CCDC130-201ENST00000221554 KTN1Q86UP2 1357 aaKnown RBP28.75■■■□□ 2.19
CCDC130-201ENST00000221554 CCDC184Q52MB2 194 aa28.75■■■□□ 2.19
CCDC130-201ENST00000221554 KIF13AQ9H1H9 1805 aa28.74■■■□□ 2.19
CCDC130-201ENST00000221554 FAM9BQ8IZU0 186 aa28.73■■■□□ 2.19
CCDC130-201ENST00000221554 ATP10AO60312 1499 aa28.72■■■□□ 2.19
CCDC130-201ENST00000221554 ARAP3Q8WWN8 1544 aa28.71■■■□□ 2.19
CCDC130-201ENST00000221554 MAGI2Q86UL8 1455 aa28.71■■■□□ 2.19
CCDC130-201ENST00000221554 KDM2AQ9Y2K7 1162 aa28.7■■■□□ 2.18
CCDC130-201ENST00000221554 PRAG1Q86YV5 1406 aa28.68■■■□□ 2.18
CCDC130-201ENST00000221554 WDR7Q9Y4E6 1490 aa28.67■■■□□ 2.18
CCDC130-201ENST00000221554 LAMC1P11047 1609 aa28.67■■■□□ 2.18
CCDC130-201ENST00000221554 TRPM1Q7Z4N2 1603 aa28.66■■■□□ 2.18
CCDC130-201ENST00000221554 ABCC1P33527 1531 aa28.65■■■□□ 2.18
CCDC130-201ENST00000221554 GPRASP1Q5JY77 1395 aa28.65■■■□□ 2.18
CCDC130-201ENST00000221554 DIP2BQ9P265 1576 aa28.64■■■□□ 2.18
CCDC130-201ENST00000221554 ST20-MTHFSA0A0A6YYL1 179 aa28.64■■■□□ 2.18
CCDC130-201ENST00000221554 RTEL1-TNFRSF6BF6WH68 1400 aa28.64■■■□□ 2.18
CCDC130-201ENST00000221554 PLA2R1Q13018 1463 aa28.64■■■□□ 2.17
CCDC130-201ENST00000221554 EIF2AK4Q9P2K8 1649 aaKnown RBP28.63■■■□□ 2.17
CCDC130-201ENST00000221554 POLR3GLQ9BT43 218 aa28.62■■■□□ 2.17
CCDC130-201ENST00000221554 RALBP1Q15311 655 aa28.6■■■□□ 2.17
CCDC130-201ENST00000221554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.6■■■□□ 2.179e-7■■□□□ 13.5
CCDC130-201ENST00000221554 TSPOAP1O95153 1857 aa28.57■■■□□ 2.16
CCDC130-201ENST00000221554 A2MP01023 1474 aa28.57■■■□□ 2.16
CCDC130-201ENST00000221554 STAC3Q96MF2 364 aa28.56■■■□□ 2.16
CCDC130-201ENST00000221554 E9PCH4 1651 aa28.56■■■□□ 2.16
CCDC130-201ENST00000221554 BRD4O60885 1362 aaPredicted RBP28.54■■■□□ 2.16
CCDC130-201ENST00000221554 TRHP20396 242 aaPredicted RBP28.53■■■□□ 2.16
CCDC130-201ENST00000221554 TMC1Q8TDI8 760 aa28.52■■■□□ 2.16
CCDC130-201ENST00000221554 PPP4R2Q9NY27 417 aa28.52■■■□□ 2.16
CCDC130-201ENST00000221554 SMG6Q86US8 1419 aaKnown RBP28.52■■■□□ 2.16
CCDC130-201ENST00000221554 FAM69CQ0P6D2 419 aa28.52■■■□□ 2.16
CCDC130-201ENST00000221554 PRDM15P57071 1507 aaPredicted RBP28.51■■■□□ 2.16
CCDC130-201ENST00000221554 SPAG9O60271 1321 aaKnown RBP28.51■■■□□ 2.15
CCDC130-201ENST00000221554 MYBBP1AQ9BQG0 1328 aaKnown RBP28.51■■■□□ 2.15
CCDC130-201ENST00000221554 WASHC2CQ9Y4E1 1318 aa28.51■■■□□ 2.15
CCDC130-201ENST00000221554 GLI2P10070 1586 aa28.5■■■□□ 2.15
CCDC130-201ENST00000221554 TRAPPC8Q9Y2L5 1435 aa28.5■■■□□ 2.15
CCDC130-201ENST00000221554 ABCA9Q8IUA7 1624 aa28.5■■■□□ 2.15
CCDC130-201ENST00000221554 RGL3Q3MIN7 710 aa28.5■■■□□ 2.15
CCDC130-201ENST00000221554 PNISRQ8TF01 805 aaKnown RBP28.5■■■□□ 2.15
CCDC130-201ENST00000221554 MAP3K4Q9Y6R4 1608 aa28.48■■■□□ 2.15
CCDC130-201ENST00000221554 PPRC1Q5VV67 1664 aaKnown RBP28.44■■■□□ 2.14
CCDC130-201ENST00000221554 ZFYVE16Q7Z3T8 1539 aa28.44■■■□□ 2.14
CCDC130-201ENST00000221554 COL17A1Q9UMD9 1497 aaPredicted RBP28.43■■■□□ 2.14
CCDC130-201ENST00000221554 LRPPRCP42704 1394 aaKnown RBP28.43■■■□□ 2.14
CCDC130-201ENST00000221554 NUDCQ9Y266 331 aa28.42■■■□□ 2.14
CCDC130-201ENST00000221554 DEPDC5O75140 1603 aa28.41■■■□□ 2.14
CCDC130-201ENST00000221554 NBPF1Q3BBV0 1214 aa28.41■■■□□ 2.14
CCDC130-201ENST00000221554 TRPM2O94759 1503 aa28.4■■■□□ 2.14
CCDC130-201ENST00000221554 KANK1Q14678 1352 aa28.39■■■□□ 2.14
CCDC130-201ENST00000221554 PTPRTO14522 1441 aa28.39■■■□□ 2.13
CCDC130-201ENST00000221554 TMF1P82094 1093 aa28.39■■■□□ 2.13
CCDC130-201ENST00000221554 PARD3Q8TEW0 1356 aa28.38■■■□□ 2.13
CCDC130-201ENST00000221554 RNF17Q9BXT8 1623 aaKnown RBP28.38■■■□□ 2.13
CCDC130-201ENST00000221554 NLRP13Q86W25 1043 aa28.37■■■□□ 2.13
CCDC130-201ENST00000221554 TESK2Q96S53 571 aa28.36■■■□□ 2.13
CCDC130-201ENST00000221554 FANCAO15360 1455 aa28.36■■■□□ 2.13
CCDC130-201ENST00000221554 CD109Q6YHK3 1445 aa28.36■■■□□ 2.13
CCDC130-201ENST00000221554 RBM19Q9Y4C8 960 aaKnown RBP28.35■■■□□ 2.13
CCDC130-201ENST00000221554 TET3O43151 1660 aa28.35■■■□□ 2.13
CCDC130-201ENST00000221554 INSRP06213 1382 aa28.35■■■□□ 2.13
CCDC130-201ENST00000221554 NEURL4Q96JN8 1562 aa28.35■■■□□ 2.13
CCDC130-201ENST00000221554 INO80Q9ULG1 1556 aaPredicted RBP28.35■■■□□ 2.13
CCDC130-201ENST00000221554 IRX6P78412 446 aaPredicted RBP28.34■■■□□ 2.13
CCDC130-201ENST00000221554 ATP7AQ04656 1500 aa28.34■■■□□ 2.13
CCDC130-201ENST00000221554 PER1O15534 1290 aaPredicted RBP28.33■■■□□ 2.13
CCDC130-201ENST00000221554 AFAP1Q8N556 730 aa28.33■■■□□ 2.13
CCDC130-201ENST00000221554 RNF123Q5XPI4 1314 aa28.33■■■□□ 2.12
CCDC130-201ENST00000221554 CEP152O94986 1710 aa28.32■■■□□ 2.12
CCDC130-201ENST00000221554 SPHKAPQ2M3C7 1700 aa28.32■■■□□ 2.12
CCDC130-201ENST00000221554 VWDEQ8N2E2 1590 aa28.31■■■□□ 2.12
CCDC130-201ENST00000221554 ZMYM4Q5VZL5 1548 aa28.3■■■□□ 2.12
CCDC130-201ENST00000221554 CNGB1Q14028 1251 aaPredicted RBP28.3■■■□□ 2.12
CCDC130-201ENST00000221554 SCAPERQ9BY12 1400 aa28.3■■■□□ 2.12
CCDC130-201ENST00000221554 CDCA8Q53HL2 280 aa28.29■■■□□ 2.12
CCDC130-201ENST00000221554 MADDQ8WXG6 1647 aa28.29■■■□□ 2.12
CCDC130-201ENST00000221554 SLC24A1O60721 1099 aa28.27■■■□□ 2.12
CCDC130-201ENST00000221554 ADGRL1O94910 1474 aa28.26■■■□□ 2.12
CCDC130-201ENST00000221554 DISP3Q9P2K9 1392 aa28.26■■■□□ 2.11
CCDC130-201ENST00000221554 PDE3BQ13370 1112 aa28.25■■■□□ 2.11
CCDC130-201ENST00000221554 IQGAP1P46940 1657 aa28.23■■■□□ 2.11
CCDC130-201ENST00000221554 KIAA1210Q9ULL0 1709 aa28.22■■■□□ 2.11
CCDC130-201ENST00000221554 CLTCL1P53675 1640 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms