RNA–Protein interactions for RNA: ENSMUST00000192168.1

Pcdha5-201, Transcript of Protocadherin alpha 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha5, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha5-201ENSMUST00000192168 Ak7Q9D2H2 614 aa18.49■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 Atl3Q91YH5 541 aa18.48■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 Washc2Q6PGL7 1334 aa18.48■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 Casq1O09165 405 aa18.48■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 PrkcshO08795 521 aa18.48■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 Trim58Q5NCC9 485 aa18.48■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 Iffo2Q8R2V2 512 aa18.47■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 Taok2Q6ZQ29 1240 aa18.47■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 Eif4g2Q62448 906 aaKnown RBP18.47■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 Smarca4Q3TKT4 1613 aaKnown RBP18.46■□□□□ 0.55
Pcdha5-201ENSMUST00000192168 CgnP59242 1191 aa18.46■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 St18Q80TY4 1045 aa18.46■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Znf330Q922H9 316 aa18.46■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Spag9Q58A65 1321 aaKnown RBP18.44■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Cux2P70298 1426 aa18.44■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Ncapd3Q6ZQK0 1506 aa18.43■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Eif2s2Q99L45 331 aaKnown RBP18.43■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 CenpjQ569L8 1344 aa18.43■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Fam184bQ0KK56 942 aa18.43■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Rassf8Q8CJ96 419 aa18.43■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 PnisrA2AJT4 805 aaKnown RBP18.42■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Plppr3Q7TPB0 716 aa18.42■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Inpp5dQ9ES52 1191 aa18.42■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 MecomP14404 1042 aa18.41■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Q3TQI7 289 aaKnown RBP18.41■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Ciz1Q8VEH2 845 aa18.41■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Zscan10Q3URR7 782 aa18.41■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Rrp9Q91WM3 475 aaKnown RBP18.4■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Tpm3-rs7D3Z2H9 248 aa18.4■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Tsen2Q6P7W5 460 aa18.39■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Plekhh1Q80TI1 1356 aa18.39■□□□□ 0.54
Pcdha5-201ENSMUST00000192168 Filip1lQ6P6L0 1131 aa18.39■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Lemd3Q9WU40 921 aa18.39■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Sf3a1Q8K4Z5 791 aaKnown RBP18.38■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 SetQ9EQU5 289 aaKnown RBP18.38■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 GsdmaQ9EST1 446 aa18.38■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Ttll13A4Q9F6 804 aa18.38■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 NgefQ8CHT1 710 aa18.38■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Isy1Q69ZQ2 285 aaKnown RBP18.38■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Atad2bE9Q166 1460 aaKnown RBP18.38■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Tpm2P58774 284 aa18.37■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Fbxo2Q80UW2 297 aa18.36■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Top2aQ01320 1528 aaKnown RBP18.36■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Anapc15P60007 132 aa18.36■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Ccdc183A2AJB1 534 aa18.36■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Kif7B7ZNG0 1348 aa18.35■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Ccdc173A0JLY1 547 aa18.35■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Ccdc146E9Q9F7 977 aa18.35■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Kif4P33174 1231 aa18.35■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Ccdc60Q8C4J0 545 aa18.35■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 G3bp1P97855 465 aaKnown RBP18.34■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Esx1O88933 382 aa18.34■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Stk26Q99JT2 416 aa18.34■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Plcd4Q8K3R3 807 aa18.34■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Gripap1Q8VD04 806 aa18.34■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Gprasp1Q5U4C1 1347 aa18.33■□□□□ 0.53
Pcdha5-201ENSMUST00000192168 Birc3O08863 600 aa18.33■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Cetn4Q8K4K1 168 aa18.33■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Gpatch11Q3UFS4 262 aa18.33■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 LrpprcQ6PB66 1392 aaKnown RBP18.32■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Rpgrip1lQ8CG73 1264 aa18.32■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 KinQ8K339 391 aa18.32■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Slc4a2P13808 1237 aaKnown RBP18.32■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Ccdc30Q8BVF4 654 aa18.31■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Ipo4Q8VI75 1082 aa18.31■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Phf14Q9D4H9 881 aa18.31■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Polr1aO35134 1717 aaKnown RBP18.31■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Rsph4aQ8BYM7 716 aa18.31■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Nap1l3Q794H2 544 aa18.31■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Phldb1Q6PDH0 1371 aaKnown RBP18.3■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Pak3Q61036 559 aa18.3■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Shroom4Q1W617 1475 aa18.29■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Rfx1P48377 963 aa18.29■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Fan1Q69ZT1 1020 aa18.29■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Gtf2a1Q99PM3 378 aa18.29■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Taf3Q5HZG4 932 aa18.28■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Sart1Q9Z315 806 aaKnown RBP18.28■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Naip1Q9QWK5 1403 aa18.28■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 AknaQ80VW7 1404 aa18.27■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 EzrP26040 586 aaKnown RBP18.27■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Kif3aP28741 701 aa18.27■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Kif3bQ61771 747 aa18.27■□□□□ 0.52
Pcdha5-201ENSMUST00000192168 Plekhg5Q66T02 1073 aa18.27■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Tpm3P21107 285 aaKnown RBP18.26■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Rtn4Q99P72 1162 aaKnown RBP18.26■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 ScribQ80U72 1612 aa18.26■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Brpf1B2RRD7 1212 aa18.26■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Ppp2r3aB2RXC8 1150 aa18.26■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 CrebrfQ8CDG5 640 aaKnown RBP18.25■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Ccer1Q9CQL2 403 aa18.25■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Ncoa2Q61026 1462 aa18.25■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Hmgn5Q9JL35 406 aa18.25■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Stk31Q99MW1 1018 aa18.24■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Plin1Q8CGN5 517 aa18.24■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Sh3bgrQ9WUZ7 214 aa18.24■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Map3k1P53349 1493 aa18.23■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Usp40Q8BWR4 1235 aa18.23■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Ift140E9PY46 1464 aa18.23■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Utp3Q9JI13 469 aaKnown RBP18.22■□□□□ 0.51
Pcdha5-201ENSMUST00000192168 Dhx29Q6PGC1 1365 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms