RNA–Protein interactions for RNA: ENSMUST00000192168.1

Pcdha5-201, Transcript of Protocadherin alpha 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha5, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha5-201ENSMUST00000192168 Rhox8Q6VSS7 320 aa25.82■■□□□ 1.72
Pcdha5-201ENSMUST00000192168 Rpgrip1Q9EPQ2 1331 aa25.01■■□□□ 1.59
Pcdha5-201ENSMUST00000192168 Las1lA2BE28 776 aaKnown RBP23.78■■□□□ 1.4
Pcdha5-201ENSMUST00000192168 Cngb1E1AZ71 1325 aa23.6■■□□□ 1.37
Pcdha5-201ENSMUST00000192168 Ehmt2Q9Z148 1263 aaKnown RBP23.41■■□□□ 1.34
Pcdha5-201ENSMUST00000192168 NischQ80TM9 1593 aa23.05■■□□□ 1.28
Pcdha5-201ENSMUST00000192168 Pelp1Q9DBD5 1123 aaKnown RBP22.99■■□□□ 1.27
Pcdha5-201ENSMUST00000192168 Acin1Q9JIX8 1338 aaKnown RBP22.98■■□□□ 1.27
Pcdha5-201ENSMUST00000192168 Wdr66E9Q743 1299 aa22.94■■□□□ 1.26
Pcdha5-201ENSMUST00000192168 Ccdc136Q3TVA9 1136 aa22.91■■□□□ 1.26
Pcdha5-201ENSMUST00000192168 Zeb1Q64318 1117 aa22.79■■□□□ 1.24
Pcdha5-201ENSMUST00000192168 Trim41Q5NCC3 630 aa22.76■■□□□ 1.23
Pcdha5-201ENSMUST00000192168 Ccdc180J3QNE4 1664 aa22.69■■□□□ 1.22
Pcdha5-201ENSMUST00000192168 NefmP08553 848 aa22.59■■□□□ 1.21
Pcdha5-201ENSMUST00000192168 CenpbP27790 599 aa22.58■■□□□ 1.2
Pcdha5-201ENSMUST00000192168 Rtl1Q7M732 1744 aa22.56■■□□□ 1.2
Pcdha5-201ENSMUST00000192168 Esf1Q3V1V3 845 aaKnown RBP22.55■■□□□ 1.2
Pcdha5-201ENSMUST00000192168 Gab3Q8BSM5 595 aa22.46■■□□□ 1.19
Pcdha5-201ENSMUST00000192168 HrcG5E8J6 738 aa22.38■■□□□ 1.17
Pcdha5-201ENSMUST00000192168 Myt1Q8CFC2 1127 aa22.28■■□□□ 1.16
Pcdha5-201ENSMUST00000192168 Stra8P70278 393 aa22.21■■□□□ 1.15
Pcdha5-201ENSMUST00000192168 Npm2Q80W85 207 aa22.2■■□□□ 1.14
Pcdha5-201ENSMUST00000192168 Ube2uB1AUC4 352 aa22.17■■□□□ 1.14
Pcdha5-201ENSMUST00000192168 Pcgf6Q99NA9 353 aa22.17■■□□□ 1.14
Pcdha5-201ENSMUST00000192168 Myt1lP97500 1187 aa22.01■■□□□ 1.11
Pcdha5-201ENSMUST00000192168 Cdk11bP24788 784 aaKnown RBP21.96■■□□□ 1.11
Pcdha5-201ENSMUST00000192168 UbtfP25976 765 aaKnown RBP21.89■■□□□ 1.1
Pcdha5-201ENSMUST00000192168 Tnnt3Q9QZ47 272 aa21.81■■□□□ 1.08
Pcdha5-201ENSMUST00000192168 Amer1Q7TS75 1132 aa21.73■■□□□ 1.07
Pcdha5-201ENSMUST00000192168 Nop58Q6DFW4 536 aaKnown RBP21.67■■□□□ 1.06
Pcdha5-201ENSMUST00000192168 Abcc9P70170 1546 aa21.62■■□□□ 1.05
Pcdha5-201ENSMUST00000192168 Supt5hO55201 1082 aaKnown RBP21.59■■□□□ 1.05
Pcdha5-201ENSMUST00000192168 Rtl5Q5DTT4 599 aa21.47■■□□□ 1.03
Pcdha5-201ENSMUST00000192168 Slc24a1Q91WD8 1130 aa21.43■■□□□ 1.02
Pcdha5-201ENSMUST00000192168 TonslQ6NZL6 1363 aa21.34■■□□□ 1.01
Pcdha5-201ENSMUST00000192168 NrdcQ8BHG1 1161 aa21.29■■□□□ 1
Pcdha5-201ENSMUST00000192168 Zcchc6Q5BLK4 1491 aaKnown RBP21.25■□□□□ 0.99
Pcdha5-201ENSMUST00000192168 Mier1Q5UAK0 511 aa21.23■□□□□ 0.99
Pcdha5-201ENSMUST00000192168 NclP09405 707 aaKnown RBP21.22■□□□□ 0.99
Pcdha5-201ENSMUST00000192168 Anp32bQ9EST5 272 aaKnown RBP21.21■□□□□ 0.99
Pcdha5-201ENSMUST00000192168 Dcaf1Q80TR8 1506 aa21.2■□□□□ 0.98
Pcdha5-201ENSMUST00000192168 ClspnQ80YR7 1315 aa21.17■□□□□ 0.98
Pcdha5-201ENSMUST00000192168 4933416C03RikQ3V063 378 aa21.16■□□□□ 0.98
Pcdha5-201ENSMUST00000192168 NeflP08551 543 aa21.14■□□□□ 0.97
Pcdha5-201ENSMUST00000192168 Ttbk1Q6PCN3 1308 aa21.1■□□□□ 0.97
Pcdha5-201ENSMUST00000192168 Fam50aQ9WV03 339 aaKnown RBP21.07■□□□□ 0.96
Pcdha5-201ENSMUST00000192168 4930567H17RikQ3V0K5 233 aa21.02■□□□□ 0.96
Pcdha5-201ENSMUST00000192168 Anp32aO35381 247 aa21.01■□□□□ 0.95
Pcdha5-201ENSMUST00000192168 Anks4bQ8K3X6 423 aa21.01■□□□□ 0.95
Pcdha5-201ENSMUST00000192168 Neurod1Q60867 357 aa20.99■□□□□ 0.95
Pcdha5-201ENSMUST00000192168 Abcc8B2RUS7 1588 aa20.98■□□□□ 0.95
Pcdha5-201ENSMUST00000192168 DiexfQ8BTT6 772 aaKnown RBP20.97■□□□□ 0.95
Pcdha5-201ENSMUST00000192168 Eif5bQ05D44 1216 aaKnown RBP20.96■□□□□ 0.95
Pcdha5-201ENSMUST00000192168 Il27Q8K3I6 234 aa20.95■□□□□ 0.94
Pcdha5-201ENSMUST00000192168 Ppargc1bQ8VHJ7 1014 aa20.95■□□□□ 0.94
Pcdha5-201ENSMUST00000192168 Aplp2Q06335 707 aa20.89■□□□□ 0.93
Pcdha5-201ENSMUST00000192168 Ap3b1Q9Z1T1 1105 aa20.88■□□□□ 0.93
Pcdha5-201ENSMUST00000192168 Cep164Q5DU05 1446 aa20.85■□□□□ 0.93
Pcdha5-201ENSMUST00000192168 Sall2Q9QX96 1004 aa20.76■□□□□ 0.91
Pcdha5-201ENSMUST00000192168 Csrnp3P59055 597 aa20.67■□□□□ 0.9
Pcdha5-201ENSMUST00000192168 Brd4Q9ESU6 1400 aaKnown RBP20.58■□□□□ 0.89
Pcdha5-201ENSMUST00000192168 Plekhg3Q4VAC9 1341 aa20.56■□□□□ 0.88
Pcdha5-201ENSMUST00000192168 Ccer2J3QPU5 274 aa20.5■□□□□ 0.87
Pcdha5-201ENSMUST00000192168 Os9Q8K2C7 672 aa20.49■□□□□ 0.87
Pcdha5-201ENSMUST00000192168 DaxxO35613 739 aa20.47■□□□□ 0.87
Pcdha5-201ENSMUST00000192168 Clip1Q922J3 1391 aa20.44■□□□□ 0.86
Pcdha5-201ENSMUST00000192168 Gm35339A0A140LHH9 1649 aa20.43■□□□□ 0.86
Pcdha5-201ENSMUST00000192168 Calr4Q3TQS0 420 aa20.38■□□□□ 0.85
Pcdha5-201ENSMUST00000192168 Ccdc9Q8VC31 543 aaKnown RBP20.37■□□□□ 0.85
Pcdha5-201ENSMUST00000192168 Lmod2Q3UHZ5 550 aa20.34■□□□□ 0.85
Pcdha5-201ENSMUST00000192168 Gm38655A0A286YDK6 273 aa20.34■□□□□ 0.85
Pcdha5-201ENSMUST00000192168 Chic1Q8CBW7 227 aa20.33■□□□□ 0.85
Pcdha5-201ENSMUST00000192168 Rb1cc1Q9ESK9 1588 aa20.32■□□□□ 0.84
Pcdha5-201ENSMUST00000192168 Upf2A2AT37 1269 aaKnown RBP20.27■□□□□ 0.84
Pcdha5-201ENSMUST00000192168 Eid3Q3V124 375 aa20.27■□□□□ 0.84
Pcdha5-201ENSMUST00000192168 Npm1Q61937 292 aaKnown RBP20.25■□□□□ 0.83
Pcdha5-201ENSMUST00000192168 1700123L14RikQ3V2K7 440 aa20.24■□□□□ 0.83
Pcdha5-201ENSMUST00000192168 Hdac5Q9Z2V6 1113 aa20.22■□□□□ 0.83
Pcdha5-201ENSMUST00000192168 Wdr43Q6ZQL4 677 aaKnown RBP20.21■□□□□ 0.83
Pcdha5-201ENSMUST00000192168 Ppp4r2Q0VGB7 417 aa20.2■□□□□ 0.83
Pcdha5-201ENSMUST00000192168 Mapk8ip2Q9ERE9 830 aa20.19■□□□□ 0.82
Pcdha5-201ENSMUST00000192168 Nlrp6Q91WS2 869 aa20.1■□□□□ 0.81
Pcdha5-201ENSMUST00000192168 Hsp90aa1P07901 733 aaKnown RBP20.08■□□□□ 0.8
Pcdha5-201ENSMUST00000192168 Mrs2Q5NCE8 434 aa19.99■□□□□ 0.79
Pcdha5-201ENSMUST00000192168 Fam71e1A1L3C1 212 aa19.96■□□□□ 0.79
Pcdha5-201ENSMUST00000192168 Aebp2Q9Z248 504 aaKnown RBP19.96■□□□□ 0.79
Pcdha5-201ENSMUST00000192168 Hnrnpul2Q00PI9 745 aaKnown RBP19.95■□□□□ 0.78
Pcdha5-201ENSMUST00000192168 Baz1aO88379 1555 aa19.94■□□□□ 0.78
Pcdha5-201ENSMUST00000192168 Golga3P55937 1487 aa19.93■□□□□ 0.78
Pcdha5-201ENSMUST00000192168 BlmO88700 1416 aa19.9■□□□□ 0.78
Pcdha5-201ENSMUST00000192168 Zbtb7cQ8VCZ7 619 aa19.9■□□□□ 0.78
Pcdha5-201ENSMUST00000192168 Ccdc27Q3V036 639 aa19.85■□□□□ 0.77
Pcdha5-201ENSMUST00000192168 Polr3glQ8R0C0 218 aa19.83■□□□□ 0.76
Pcdha5-201ENSMUST00000192168 Setd5Q5XJV7 1441 aa19.83■□□□□ 0.76
Pcdha5-201ENSMUST00000192168 Zbtb4Q5F293 982 aa19.81■□□□□ 0.76
Pcdha5-201ENSMUST00000192168 NacadQ5SWP3 1504 aa19.8■□□□□ 0.76
Pcdha5-201ENSMUST00000192168 Erich6D3Z6S9 713 aa19.76■□□□□ 0.75
Pcdha5-201ENSMUST00000192168 ArxO35085 564 aa19.75■□□□□ 0.75
Pcdha5-201ENSMUST00000192168 Clstn2Q9ER65 966 aa19.75■□□□□ 0.75
Pcdha5-201ENSMUST00000192168 Eea1Q8BL66 1411 aa19.72■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 128.8 ms