RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Scaf11E9PZM7 1456 aaKnown RBP28.63■■■□□ 2.17
Sqstm1-205ENSMUST00000143379 Kif7B7ZNG0 1348 aa28.63■■■□□ 2.17
Sqstm1-205ENSMUST00000143379 Arhgap23Q69ZH9 1483 aa28.59■■■□□ 2.17
Sqstm1-205ENSMUST00000143379 Xrn1P97789 1719 aaKnown RBP28.59■■■□□ 2.17
Sqstm1-205ENSMUST00000143379 Rapgef3Q8VCC8 918 aa28.58■■■□□ 2.17
Sqstm1-205ENSMUST00000143379 Bcl11bQ99PV8 884 aa28.57■■■□□ 2.16
Sqstm1-205ENSMUST00000143379 GphnQ8BUV3 769 aaKnown RBP28.56■■■□□ 2.16
Sqstm1-205ENSMUST00000143379 Rims2Q9EQZ7 1530 aa28.53■■■□□ 2.16
Sqstm1-205ENSMUST00000143379 Znf518aB2RRF6 1478 aaKnown RBP28.5■■■□□ 2.15
Sqstm1-205ENSMUST00000143379 PzpQ61838 1495 aa28.49■■■□□ 2.15
Sqstm1-205ENSMUST00000143379 Gm13697A2AK42 830 aa28.49■■■□□ 2.15
Sqstm1-205ENSMUST00000143379 Naip5Q9R016 1403 aa28.49■■■□□ 2.15
Sqstm1-205ENSMUST00000143379 Zc3h13E9Q784 1729 aaKnown RBP28.46■■■□□ 2.15
Sqstm1-205ENSMUST00000143379 Uggt2E9Q4X2 1504 aa28.44■■■□□ 2.14
Sqstm1-205ENSMUST00000143379 Naip1Q9QWK5 1403 aa28.43■■■□□ 2.14
Sqstm1-205ENSMUST00000143379 Kif3bQ61771 747 aa28.42■■■□□ 2.14
Sqstm1-205ENSMUST00000143379 Ccnb3Q810T2 1396 aa28.41■■■□□ 2.14
Sqstm1-205ENSMUST00000143379 Abcc6Q9R1S7 1498 aa28.4■■■□□ 2.14
Sqstm1-205ENSMUST00000143379 DroshaQ5HZJ0 1373 aaKnown RBP28.39■■■□□ 2.14
Sqstm1-205ENSMUST00000143379 Topbp1Q6ZQF0 1515 aa28.37■■■□□ 2.13
Sqstm1-205ENSMUST00000143379 Lmtk2Q3TYD6 1471 aa28.36■■■□□ 2.13
Sqstm1-205ENSMUST00000143379 Tubgcp6G5E8P0 1769 aa28.35■■■□□ 2.13
Sqstm1-205ENSMUST00000143379 Rrp7aQ9D1C9 280 aaKnown RBP28.35■■■□□ 2.13
Sqstm1-205ENSMUST00000143379 Fmn2Q9JL04 1578 aa28.34■■■□□ 2.13
Sqstm1-205ENSMUST00000143379 Iqgap1Q9JKF1 1657 aaKnown RBP28.29■■■□□ 2.12
Sqstm1-205ENSMUST00000143379 Rsph4aQ8BYM7 716 aa28.28■■■□□ 2.12
Sqstm1-205ENSMUST00000143379 Adgrb2Q8CGM1 1561 aa28.27■■■□□ 2.12
Sqstm1-205ENSMUST00000143379 Plch2A2AP18 1501 aa28.26■■■□□ 2.11
Sqstm1-205ENSMUST00000143379 Nrxn3Q6P9K9 1571 aa28.24■■■□□ 2.11
Sqstm1-205ENSMUST00000143379 Cdk11bP24788 784 aaKnown RBP28.23■■■□□ 2.11
Sqstm1-205ENSMUST00000143379 Fbln2P37889 1221 aa28.23■■■□□ 2.11
Sqstm1-205ENSMUST00000143379 Hfm1D3Z4R1 1434 aa28.22■■■□□ 2.11
Sqstm1-205ENSMUST00000143379 Chd2E9PZM4 1827 aaKnown RBP28.21■■■□□ 2.11
Sqstm1-205ENSMUST00000143379 Prdm16A2A935 1275 aa28.21■■■□□ 2.11
Sqstm1-205ENSMUST00000143379 Asxl1P59598 1514 aa28.2■■■□□ 2.1
Sqstm1-205ENSMUST00000143379 Mast1Q9R1L5 1570 aa28.2■■■□□ 2.1
Sqstm1-205ENSMUST00000143379 Arid4bA2CG63 1314 aaKnown RBP28.18■■■□□ 2.1
Sqstm1-205ENSMUST00000143379 Abca17E9PX95 1733 aa28.17■■■□□ 2.1
Sqstm1-205ENSMUST00000143379 Amigo3Q8C2S7 508 aa28.16■■■□□ 2.1
Sqstm1-205ENSMUST00000143379 Robo2Q7TPD3 1470 aa28.15■■■□□ 2.1
Sqstm1-205ENSMUST00000143379 Zbtb7cQ8VCZ7 619 aa28.13■■■□□ 2.09
Sqstm1-205ENSMUST00000143379 DnmbpQ6TXD4 1580 aa28.11■■■□□ 2.09
Sqstm1-205ENSMUST00000143379 Usp54Q8BL06 1588 aaKnown RBP28.11■■■□□ 2.09
Sqstm1-205ENSMUST00000143379 Cypt2Q6P924 180 aa28.09■■■□□ 2.09
Sqstm1-205ENSMUST00000143379 Spag9Q58A65 1321 aaKnown RBP28.07■■■□□ 2.08
Sqstm1-205ENSMUST00000143379 Slit2Q9R1B9 1521 aa28.06■■■□□ 2.08
Sqstm1-205ENSMUST00000143379 Prex1Q69ZK0 1650 aa28.06■■■□□ 2.08
Sqstm1-205ENSMUST00000143379 Nyap1Q6PFX7 833 aa28.05■■■□□ 2.08
Sqstm1-205ENSMUST00000143379 Myo5cE9Q1F5 1742 aa28.04■■■□□ 2.08
Sqstm1-205ENSMUST00000143379 Adamts7Q68SA9 1657 aa28.02■■■□□ 2.08
Sqstm1-205ENSMUST00000143379 Med1Q925J9 1575 aa28.02■■■□□ 2.08
Sqstm1-205ENSMUST00000143379 Cdk13Q69ZA1 1511 aaKnown RBP28.02■■■□□ 2.08
Sqstm1-205ENSMUST00000143379 Abcc5Q9R1X5 1436 aa28.01■■■□□ 2.07
Sqstm1-205ENSMUST00000143379 Tom1O88746 492 aa28■■■□□ 2.07
Sqstm1-205ENSMUST00000143379 Adgrb3Q80ZF8 1522 aa28■■■□□ 2.07
Sqstm1-205ENSMUST00000143379 Mtus2Q3UHD3 1353 aa27.96■■■□□ 2.07
Sqstm1-205ENSMUST00000143379 ShprhQ7TPQ3 1674 aa27.95■■■□□ 2.07
Sqstm1-205ENSMUST00000143379 Ssh2Q5SW75 1423 aa27.93■■■□□ 2.06
Sqstm1-205ENSMUST00000143379 Akap12Q9WTQ5 1684 aa27.93■■■□□ 2.06
Sqstm1-205ENSMUST00000143379 Vps8Q0P5W1 1427 aa27.92■■■□□ 2.06
Sqstm1-205ENSMUST00000143379 Kdm5aQ3UXZ9 1690 aa27.91■■■□□ 2.06
Sqstm1-205ENSMUST00000143379 Mbd5B1AYB6 1498 aa27.91■■■□□ 2.06
Sqstm1-205ENSMUST00000143379 Kif13aQ9EQW7 1749 aa27.88■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Eif2ak4Q9QZ05 1648 aa27.88■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Thsd7aQ69ZU6 1645 aa27.86■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Brinp3Q499E0 766 aa27.86■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Plekhh2Q8C115 1491 aa27.85■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Adgrl2Q8JZZ7 1487 aa27.85■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Setd1aE9PYH6 1716 aa27.85■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Itsn1Q9Z0R4 1714 aa27.84■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Hnrnpul2Q00PI9 745 aaKnown RBP27.84■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Pik3c2aQ61194 1686 aa27.83■■■□□ 2.05
Sqstm1-205ENSMUST00000143379 Cabp1Q9JLK7 227 aa27.81■■■□□ 2.04
Sqstm1-205ENSMUST00000143379 Fhad1A6PWD2 1420 aa27.81■■■□□ 2.04
Sqstm1-205ENSMUST00000143379 Txndc2Q6P902 515 aa27.8■■■□□ 2.04
Sqstm1-205ENSMUST00000143379 Gimap5Q8BWF2 308 aa27.8■■■□□ 2.04
Sqstm1-205ENSMUST00000143379 Col18a1P39061 1774 aa27.8■■■□□ 2.04
Sqstm1-205ENSMUST00000143379 3425401B19RikD3Z1D3 1412 aa27.79■■■□□ 2.04
Sqstm1-205ENSMUST00000143379 Ildr2B5TVM2 661 aa27.79■■■□□ 2.04
Sqstm1-205ENSMUST00000143379 Kif21bQ9QXL1 1668 aa27.78■■■□□ 2.04
Sqstm1-205ENSMUST00000143379 IghaA0A0A6YXW6 389 aa27.76■■■□□ 2.03
Sqstm1-205ENSMUST00000143379 Pde4cQ3UEI1 686 aa27.74■■■□□ 2.03
Sqstm1-205ENSMUST00000143379 Kif1bQ60575 1816 aaKnown RBP27.74■■■□□ 2.03
Sqstm1-205ENSMUST00000143379 Sema6bO54951 886 aa27.71■■■□□ 2.03
Sqstm1-205ENSMUST00000143379 Fnbp4Q6ZQ03 1031 aa27.71■■■□□ 2.03
Sqstm1-205ENSMUST00000143379 Myo3aQ8K3H5 1613 aa27.7■■■□□ 2.03
Sqstm1-205ENSMUST00000143379 Skint5A7XUY5 1461 aa27.7■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Naip7Q9JIB3 1402 aa27.68■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Slc5a4bQ91ZP4 660 aa27.68■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Nhsl1Q8CAF4 1587 aa27.68■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Lamc1P02468 1607 aaKnown RBP27.67■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Tmem131lQ3U3D7 1597 aa27.67■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Chic2Q9D9G3 165 aa27.66■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 NinlQ6ZQ12 1394 aa27.65■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Ttll13A4Q9F6 804 aa27.65■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Zranb1Q7M760 708 aa27.65■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Cntnap1O54991 1385 aa27.64■■■□□ 2.02
Sqstm1-205ENSMUST00000143379 Qtrt2B8ZXI1 415 aa27.62■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Adgrl1Q80TR1 1466 aa27.62■■■□□ 2.01
Sqstm1-205ENSMUST00000143379 Il16O54824 1322 aa27.62■■■□□ 2.01
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms