RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Rsph3aQ3UFY4 516 aa19.32■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Cald1E9QA15 768 aaKnown RBP19.32■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 GorabQ8BRM2 368 aa19.32■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Sart1Q9Z315 806 aaKnown RBP19.32■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Tpm3-rs7D3Z2H9 248 aa19.32■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Ankrd36D3Z4K0 1415 aa19.31■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Mre11Q61216 706 aa19.31■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Cspp1B2RX88 1205 aa19.3■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Ralbp1Q62172 648 aa19.3■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Atad2bE9Q166 1460 aaKnown RBP19.3■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Dnai2A2AC93 623 aa19.29■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Tsen2Q6P7W5 460 aa19.29■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 ChgaP26339 463 aaKnown RBP19.28■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Fan1Q69ZT1 1020 aa19.28■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 LrpprcQ6PB66 1392 aaKnown RBP19.28■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Glipr1l2Q9CQ35 332 aa19.27■□□□□ 0.68
Pcdha9-201ENSMUST00000115659 Becn1O88597 448 aa19.27■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 Txndc2Q6P902 515 aa19.26■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 Fam184bQ0KK56 942 aa19.26■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 HdgfP51859 237 aaKnown RBP19.25■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 VgfQ0VGU4 617 aa19.24■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 Inpp5dQ9ES52 1191 aa19.23■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 SlkO54988 1233 aa19.23■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 GsdmaQ9EST1 446 aa19.23■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 Tnnt1O88346 262 aa19.22■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 Dapk1Q80YE7 1442 aa19.22■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 Stk31Q99MW1 1018 aa19.22■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 Brpf1B2RRD7 1212 aa19.21■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 Smarca4Q3TKT4 1613 aaKnown RBP19.21■□□□□ 0.67
Pcdha9-201ENSMUST00000115659 St18Q80TY4 1045 aa19.21■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Ccdc60Q8C4J0 545 aa19.2■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Ciz1Q8VEH2 845 aa19.2■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Cttnbp2B9EJA2 1648 aa19.2■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Utp14aQ640M1 767 aaKnown RBP19.19■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Gtf3c3Q3TMP1 882 aa19.19■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Kiaa0754Q69ZZ9 979 aa19.19■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Ccdc146E9Q9F7 977 aa19.19■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Trim58Q5NCC9 485 aa19.19■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Zscan10Q3URR7 782 aa19.18■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Ush1cQ9ES64 910 aa19.18■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 G3bp1P97855 465 aaKnown RBP19.18■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Znf316Q6PGE4 1016 aa19.18■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Kif16bB1AVY7 1312 aa19.18■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Kif7B7ZNG0 1348 aa19.18■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Cux1P53564 1515 aa19.17■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Rab11fip3Q8CHD8 1047 aa19.17■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 WrnO09053 1401 aa19.17■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Trim30aP15533 496 aa19.16■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Filip1lQ6P6L0 1131 aa19.16■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Usp40Q8BWR4 1235 aa19.16■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 CrebrfQ8CDG5 640 aaKnown RBP19.15■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Casq1O09165 405 aa19.15■□□□□ 0.66
Pcdha9-201ENSMUST00000115659 Atl3Q91YH5 541 aa19.14■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Sf3a1Q8K4Z5 791 aaKnown RBP19.13■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Sox12Q04890 314 aa19.13■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Ccer1Q9CQL2 403 aa19.13■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Ncoa2Q61026 1462 aa19.12■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Pibf1E9Q6K3 756 aa19.11■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Prkrip1Q9CWV6 186 aaKnown RBP19.11■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Vps8Q0P5W1 1427 aa19.11■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Chmp3Q9CQ10 224 aa19.11■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Dhx29Q6PGC1 1365 aaKnown RBP19.11■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Ap3b2Q9JME5 1082 aa19.1■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Esx1O88933 382 aa19.1■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Rabep1O35551 862 aa19.1■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Ecm2Q5FW85 670 aa19.1■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Ccdc47Q9D024 483 aaKnown RBP19.1■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Ak7Q9D2H2 614 aa19.1■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Cc2d2bA0A286YDU8 1405 aa19.09■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Nap1l3Q794H2 544 aa19.09■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Nsd2Q8BVE8 1365 aa19.09■□□□□ 0.65
Pcdha9-201ENSMUST00000115659 Gprasp1Q5U4C1 1347 aa19.07■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Slc4a10Q5DTL9 1118 aa19.07■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 KinQ8K339 391 aa19.07■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Tpm3P21107 285 aaKnown RBP19.07■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 SetQ9EQU5 289 aaKnown RBP19.06■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Ccdc30Q8BVF4 654 aa19.04■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Cetn4Q8K4K1 168 aa19.04■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Senp3Q9EP97 568 aaKnown RBP19.04■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Map7d2A2AG50 781 aa19.03■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Tpd52l1O54818 204 aa19.03■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 ErbinQ80TH2 1402 aa19.03■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Srek1Q8BZX4 494 aaKnown RBP19.03■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Gpatch11Q3UFS4 262 aa19.03■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Sh3bgrQ9WUZ7 214 aa19.03■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Tdrd9Q14BI7 1383 aa19.02■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Znf710Q3U288 666 aa19.02■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Smc4Q8CG47 1286 aa19.02■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Eif2s2Q99L45 331 aaKnown RBP19.02■□□□□ 0.64
Pcdha9-201ENSMUST00000115659 Efcab5A0JP43 1406 aa19.01■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Polr1aO35134 1717 aaKnown RBP19.01■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Rpgrip1lQ8CG73 1264 aa19.01■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Cabp4Q8VHC5 271 aa19.01■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Plekhh1Q80TI1 1356 aa19.01■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Shq1Q7TMX5 569 aa19.01■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Gnai1B2RSH2 354 aa19■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Gnai3Q9DC51 354 aa19■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Cplx2P84086 134 aa18.99■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Shroom4Q1W617 1475 aa18.99■□□□□ 0.63
Pcdha9-201ENSMUST00000115659 Kif4P33174 1231 aa18.98■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms