RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Dhx57Q6P5D3 1388 aaKnown RBP9.54□□□□□ -0.88
Chm-202ENSMUST00000113388 Arhgef11Q68FM7 1552 aa9.54□□□□□ -0.88
Chm-202ENSMUST00000113388 Gm1043A0A140LJC2 1431 aa9.54□□□□□ -0.88
Chm-202ENSMUST00000113388 NexmifQ5DTT1 1515 aa9.54□□□□□ -0.88
Chm-202ENSMUST00000113388 Lemd3Q9WU40 921 aa9.53□□□□□ -0.88
Chm-202ENSMUST00000113388 NhsB1AV60 1647 aa9.52□□□□□ -0.88
Chm-202ENSMUST00000113388 Arhgap5P97393 1501 aa9.52□□□□□ -0.88
Chm-202ENSMUST00000113388 Sart1Q9Z315 806 aaKnown RBP9.51□□□□□ -0.89
Chm-202ENSMUST00000113388 Brd2Q7JJ13 798 aaKnown RBP9.51□□□□□ -0.89
Chm-202ENSMUST00000113388 Cul7Q8VE73 1689 aa9.51□□□□□ -0.89
Chm-202ENSMUST00000113388 Gcc2Q8CHG3 1679 aa9.5□□□□□ -0.89
Chm-202ENSMUST00000113388 Tiam1Q60610 1591 aa9.5□□□□□ -0.89
Chm-202ENSMUST00000113388 Fbxo2Q80UW2 297 aa9.5□□□□□ -0.89
Chm-202ENSMUST00000113388 Ipo9Q91YE6 1041 aa9.5□□□□□ -0.89
Chm-202ENSMUST00000113388 Mlh3A0A1Y7VMP7 1443 aa9.5□□□□□ -0.89
Chm-202ENSMUST00000113388 Clasp1Q80TV8 1535 aaKnown RBP9.5□□□□□ -0.89
Chm-202ENSMUST00000113388 Trim44Q9QXA7 346 aa9.5□□□□□ -0.89
Chm-202ENSMUST00000113388 Fndc1E9Q043 1732 aa9.49□□□□□ -0.89
Chm-202ENSMUST00000113388 Slc4a1apE9PX68 744 aa9.49□□□□□ -0.89
Chm-202ENSMUST00000113388 Kiaa1211Q5PR69 1207 aa9.49□□□□□ -0.89
Chm-202ENSMUST00000113388 MyclP10166 368 aa9.49□□□□□ -0.89
Chm-202ENSMUST00000113388 Rrp7aQ9D1C9 280 aaKnown RBP9.49□□□□□ -0.89
Chm-202ENSMUST00000113388 Zfyve16Q80U44 1528 aa9.49□□□□□ -0.89
Chm-202ENSMUST00000113388 Safb2Q80YR5 991 aaKnown RBP9.48□□□□□ -0.89
Chm-202ENSMUST00000113388 Plcd3Q8K2J0 785 aa9.48□□□□□ -0.89
Chm-202ENSMUST00000113388 Trappc8E9PWG2 1437 aa9.48□□□□□ -0.89
Chm-202ENSMUST00000113388 Samd1D3YXK1 519 aa9.47□□□□□ -0.89
Chm-202ENSMUST00000113388 Chrna2Q91X60 512 aa9.47□□□□□ -0.89
Chm-202ENSMUST00000113388 Ttc37F8VPK0 1563 aa9.47□□□□□ -0.89
Chm-202ENSMUST00000113388 Rrp12Q6P5B0 1295 aaKnown RBP9.47□□□□□ -0.89
Chm-202ENSMUST00000113388 Mapkbp1Q6NS57 1503 aa9.46□□□□□ -0.89
Chm-202ENSMUST00000113388 Chmp4bQ9D8B3 224 aaKnown RBP9.46□□□□□ -0.89
Chm-202ENSMUST00000113388 Map3k5O35099 1380 aa9.46□□□□□ -0.89
Chm-202ENSMUST00000113388 Rsph4aQ8BYM7 716 aa9.46□□□□□ -0.89
Chm-202ENSMUST00000113388 NgefQ8CHT1 710 aa9.46□□□□□ -0.89
Chm-202ENSMUST00000113388 Ube2q2Q8K2Z8 378 aa9.45□□□□□ -0.9
Chm-202ENSMUST00000113388 Cabp1Q9JLK7 227 aa9.45□□□□□ -0.9
Chm-202ENSMUST00000113388 CanxP35564 591 aaKnown RBP9.44□□□□□ -0.9
Chm-202ENSMUST00000113388 Abca8bQ8K440 1620 aa9.44□□□□□ -0.9
Chm-202ENSMUST00000113388 Polr3glQ8R0C0 218 aa9.43□□□□□ -0.9
Chm-202ENSMUST00000113388 Arhgef40Q3UPH7 1517 aa9.43□□□□□ -0.9
Chm-202ENSMUST00000113388 Kiaa1551Q5DTW7 1521 aa9.43□□□□□ -0.9
Chm-202ENSMUST00000113388 Mtus2Q3UHD3 1353 aa9.43□□□□□ -0.9
Chm-202ENSMUST00000113388 Sparcl1P70663 650 aa9.43□□□□□ -0.9
Chm-202ENSMUST00000113388 Cdc42bpaQ3UU96 1719 aa9.42□□□□□ -0.9
Chm-202ENSMUST00000113388 Ptch1Q61115 1434 aa9.42□□□□□ -0.9
Chm-202ENSMUST00000113388 AdgbG3UZ78 1657 aa9.41□□□□□ -0.9
Chm-202ENSMUST00000113388 Zfp91Q62511 572 aa9.41□□□□□ -0.9
Chm-202ENSMUST00000113388 Arid4bA2CG63 1314 aaKnown RBP9.4□□□□□ -0.9
Chm-202ENSMUST00000113388 Adcy10Q8C0T9 1614 aa9.4□□□□□ -0.9
Chm-202ENSMUST00000113388 Gm13697A2AK42 830 aa9.4□□□□□ -0.9
Chm-202ENSMUST00000113388 OvosQ3UU35 1456 aa9.4□□□□□ -0.91
Chm-202ENSMUST00000113388 Kif3bQ61771 747 aa9.39□□□□□ -0.91
Chm-202ENSMUST00000113388 Ccer2J3QPU5 274 aa9.39□□□□□ -0.91
Chm-202ENSMUST00000113388 Yeats2Q3TUF7 1407 aa9.38□□□□□ -0.91
Chm-202ENSMUST00000113388 Fam208aQ69ZR9 1610 aaKnown RBP9.38□□□□□ -0.91
Chm-202ENSMUST00000113388 Ncbp3Q8BZR9 615 aaKnown RBP9.38□□□□□ -0.91
Chm-202ENSMUST00000113388 Tmem132aQ922P8 1018 aa9.38□□□□□ -0.91
Chm-202ENSMUST00000113388 Peg3Q3URU2 1571 aa9.38□□□□□ -0.91
Chm-202ENSMUST00000113388 Afap1Q80YS6 731 aa9.37□□□□□ -0.91
Chm-202ENSMUST00000113388 AglF8VPN4 1532 aa9.37□□□□□ -0.91
Chm-202ENSMUST00000113388 Dusp27Q148W8 1138 aa9.37□□□□□ -0.91
Chm-202ENSMUST00000113388 PtmsQ9D0J8 101 aaKnown RBP9.37□□□□□ -0.91
Chm-202ENSMUST00000113388 Kdm6bQ5NCY0 1641 aa9.37□□□□□ -0.91
Chm-202ENSMUST00000113388 Abca9Q8K449 1623 aa9.36□□□□□ -0.91
Chm-202ENSMUST00000113388 Plekhh2Q8C115 1491 aa9.36□□□□□ -0.91
Chm-202ENSMUST00000113388 Kiaa1210E9Q0C6 1637 aa9.36□□□□□ -0.91
Chm-202ENSMUST00000113388 3425401B19RikD3Z1D3 1412 aa9.36□□□□□ -0.91
Chm-202ENSMUST00000113388 Lmtk2Q3TYD6 1471 aa9.35□□□□□ -0.91
Chm-202ENSMUST00000113388 Abcc5Q9R1X5 1436 aa9.35□□□□□ -0.91
Chm-202ENSMUST00000113388 Erich6D3Z6S9 713 aa9.34□□□□□ -0.91
Chm-202ENSMUST00000113388 ChgaP26339 463 aaKnown RBP9.34□□□□□ -0.91
Chm-202ENSMUST00000113388 Spryd3E9Q9B3 442 aa9.33□□□□□ -0.92
Chm-202ENSMUST00000113388 Caskin1Q6P9K8 1431 aa9.33□□□□□ -0.92
Chm-202ENSMUST00000113388 Rnf17Q99MV7 1640 aa9.33□□□□□ -0.92
Chm-202ENSMUST00000113388 Zfp644E9QA22 1323 aa9.32□□□□□ -0.92
Chm-202ENSMUST00000113388 Cyb5rlB1AS42 316 aa9.32□□□□□ -0.92
Chm-202ENSMUST00000113388 Synj2Q9D2G5 1434 aa9.32□□□□□ -0.92
Chm-202ENSMUST00000113388 Irx6Q9ER75 438 aa9.32□□□□□ -0.92
Chm-202ENSMUST00000113388 Spag9Q58A65 1321 aaKnown RBP9.3□□□□□ -0.92
Chm-202ENSMUST00000113388 Cfap65Q3V0B4 1847 aa9.3□□□□□ -0.92
Chm-202ENSMUST00000113388 Map7d2A2AG50 781 aa9.3□□□□□ -0.92
Chm-202ENSMUST00000113388 Htatsf1Q8BGC0 757 aa9.3□□□□□ -0.92
Chm-202ENSMUST00000113388 Kidins220E9Q9B7 1793 aa9.3□□□□□ -0.92
Chm-202ENSMUST00000113388 Pak3Q61036 559 aa9.29□□□□□ -0.92
Chm-202ENSMUST00000113388 NpatQ8BMA5 1420 aa9.29□□□□□ -0.92
Chm-202ENSMUST00000113388 Slc4a3P16283 1227 aa9.29□□□□□ -0.92
Chm-202ENSMUST00000113388 Ddrgk1Q80WW9 315 aa9.29□□□□□ -0.92
Chm-202ENSMUST00000113388 Gm32742A0A1B0GT42 1604 aa9.28□□□□□ -0.92
Chm-202ENSMUST00000113388 Tpm2P58774 284 aa9.28□□□□□ -0.92
Chm-202ENSMUST00000113388 Dip2cE9PWR4 1557 aa9.28□□□□□ -0.92
Chm-202ENSMUST00000113388 Naip2Q9QUK4 1447 aa9.28□□□□□ -0.92
Chm-202ENSMUST00000113388 Hecw2Q6I6G8 1578 aa9.27□□□□□ -0.93
Chm-202ENSMUST00000113388 Cfap74Q3UY96 1578 aa9.27□□□□□ -0.93
Chm-202ENSMUST00000113388 Adgrb2Q8CGM1 1561 aa9.27□□□□□ -0.93
Chm-202ENSMUST00000113388 Qser1A2BIE1 1698 aa9.27□□□□□ -0.93
Chm-202ENSMUST00000113388 MsnP26041 577 aaKnown RBP9.26□□□□□ -0.93
Chm-202ENSMUST00000113388 Eid3Q3V124 375 aa9.26□□□□□ -0.93
Chm-202ENSMUST00000113388 Abcc3B2RX12 1523 aa9.26□□□□□ -0.93
Chm-202ENSMUST00000113388 Map4P27546 1125 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms