RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 NischQ80TM9 1593 aa13.39□□□□□ -0.27
Chm-202ENSMUST00000113388 Gm35339A0A140LHH9 1649 aa13.21□□□□□ -0.29
Chm-202ENSMUST00000113388 Abcc9P70170 1546 aa12.86□□□□□ -0.35
Chm-202ENSMUST00000113388 Abcc8B2RUS7 1588 aa12.84□□□□□ -0.35
Chm-202ENSMUST00000113388 ScribQ80U72 1612 aa12.32□□□□□ -0.44
Chm-202ENSMUST00000113388 Rpgrip1Q9EPQ2 1331 aa12.21□□□□□ -0.45
Chm-202ENSMUST00000113388 Rhox8Q6VSS7 320 aa12.16□□□□□ -0.46
Chm-202ENSMUST00000113388 Las1lA2BE28 776 aaKnown RBP12.01□□□□□ -0.49
Chm-202ENSMUST00000113388 Kdm5dQ62240 1548 aa12.01□□□□□ -0.49
Chm-202ENSMUST00000113388 NacadQ5SWP3 1504 aa11.97□□□□□ -0.49
Chm-202ENSMUST00000113388 DiexfQ8BTT6 772 aaKnown RBP11.94□□□□□ -0.5
Chm-202ENSMUST00000113388 Amer1Q7TS75 1132 aa11.92□□□□□ -0.5
Chm-202ENSMUST00000113388 Myt1Q8CFC2 1127 aa11.84□□□□□ -0.51
Chm-202ENSMUST00000113388 CenpbP27790 599 aa11.76□□□□□ -0.53
Chm-202ENSMUST00000113388 Sycp2Q9CUU3 1500 aa11.72□□□□□ -0.53
Chm-202ENSMUST00000113388 Rb1cc1Q9ESK9 1588 aa11.69□□□□□ -0.54
Chm-202ENSMUST00000113388 Dcaf1Q80TR8 1506 aa11.67□□□□□ -0.54
Chm-202ENSMUST00000113388 Zcchc6Q5BLK4 1491 aaKnown RBP11.55□□□□□ -0.56
Chm-202ENSMUST00000113388 BicraF8VPZ9 1578 aa11.55□□□□□ -0.56
Chm-202ENSMUST00000113388 Pcgf6Q99NA9 353 aa11.54□□□□□ -0.56
Chm-202ENSMUST00000113388 Cngb1E1AZ71 1325 aa11.49□□□□□ -0.57
Chm-202ENSMUST00000113388 Baz1aO88379 1555 aa11.46□□□□□ -0.57
Chm-202ENSMUST00000113388 Dnajc5bQ9CQ94 199 aa11.44□□□□□ -0.58
Chm-202ENSMUST00000113388 Ccdc136Q3TVA9 1136 aa11.35□□□□□ -0.59
Chm-202ENSMUST00000113388 Pds5bQ4VA53 1446 aaKnown RBP11.26□□□□□ -0.61
Chm-202ENSMUST00000113388 Crybg2B7ZCC2 1516 aa11.24□□□□□ -0.61
Chm-202ENSMUST00000113388 Bcl11aQ9QYE3 773 aa11.24□□□□□ -0.61
Chm-202ENSMUST00000113388 Cecr2E9Q2Z1 1453 aa11.22□□□□□ -0.61
Chm-202ENSMUST00000113388 Acin1Q9JIX8 1338 aaKnown RBP11.18□□□□□ -0.62
Chm-202ENSMUST00000113388 Ccdc180J3QNE4 1664 aa11.16□□□□□ -0.62
Chm-202ENSMUST00000113388 Atad2bE9Q166 1460 aaKnown RBP11.15□□□□□ -0.62
Chm-202ENSMUST00000113388 Smarca2Q6DIC0 1577 aa11.11□□□□□ -0.63
Chm-202ENSMUST00000113388 Esf1Q3V1V3 845 aaKnown RBP11.1□□□□□ -0.63
Chm-202ENSMUST00000113388 Ercc6F8VPZ5 1481 aa11.1□□□□□ -0.63
Chm-202ENSMUST00000113388 Smarca4Q3TKT4 1613 aaKnown RBP11.08□□□□□ -0.64
Chm-202ENSMUST00000113388 Ehmt2Q9Z148 1263 aaKnown RBP11.08□□□□□ -0.64
Chm-202ENSMUST00000113388 Pelp1Q9DBD5 1123 aaKnown RBP11.07□□□□□ -0.64
Chm-202ENSMUST00000113388 Ttbk1Q6PCN3 1308 aa11.05□□□□□ -0.64
Chm-202ENSMUST00000113388 Iqgap2Q3UQ44 1575 aa11.04□□□□□ -0.64
Chm-202ENSMUST00000113388 Thoc2B1AZI6 1594 aaKnown RBP11.02□□□□□ -0.65
Chm-202ENSMUST00000113388 Ubl4bQ9CQ84 188 aa11□□□□□ -0.65
Chm-202ENSMUST00000113388 Cc2d2aQ8CFW7 1633 aa10.99□□□□□ -0.65
Chm-202ENSMUST00000113388 Neurod1Q60867 357 aa10.99□□□□□ -0.65
Chm-202ENSMUST00000113388 Rtl1Q7M732 1744 aa10.96□□□□□ -0.66
Chm-202ENSMUST00000113388 Trim41Q5NCC3 630 aa10.95□□□□□ -0.66
Chm-202ENSMUST00000113388 Frmpd1A2AKB4 1549 aa10.94□□□□□ -0.66
Chm-202ENSMUST00000113388 Brd4Q9ESU6 1400 aaKnown RBP10.92□□□□□ -0.66
Chm-202ENSMUST00000113388 Synj1Q8CHC4 1574 aa10.91□□□□□ -0.66
Chm-202ENSMUST00000113388 CftrP26361 1476 aa10.9□□□□□ -0.66
Chm-202ENSMUST00000113388 1700123L14RikQ3V2K7 440 aa10.89□□□□□ -0.67
Chm-202ENSMUST00000113388 Wdr62Q3U3T8 1523 aa10.89□□□□□ -0.67
Chm-202ENSMUST00000113388 Phldb1Q6PDH0 1371 aaKnown RBP10.89□□□□□ -0.67
Chm-202ENSMUST00000113388 PrkcshO08795 521 aa10.86□□□□□ -0.67
Chm-202ENSMUST00000113388 Supt5hO55201 1082 aaKnown RBP10.85□□□□□ -0.67
Chm-202ENSMUST00000113388 Il27Q8K3I6 234 aa10.82□□□□□ -0.68
Chm-202ENSMUST00000113388 Zeb1Q64318 1117 aa10.8□□□□□ -0.68
Chm-202ENSMUST00000113388 Cttnbp2B9EJA2 1648 aa10.8□□□□□ -0.68
Chm-202ENSMUST00000113388 Fam135aQ6NS59 1506 aa10.8□□□□□ -0.68
Chm-202ENSMUST00000113388 Csrnp3P59055 597 aa10.79□□□□□ -0.68
Chm-202ENSMUST00000113388 Kif15Q6P9L6 1387 aa10.75□□□□□ -0.69
Chm-202ENSMUST00000113388 Aplp2Q06335 707 aa10.74□□□□□ -0.69
Chm-202ENSMUST00000113388 Npm1Q61937 292 aaKnown RBP10.7□□□□□ -0.7
Chm-202ENSMUST00000113388 Rsf1E9PWW9 1441 aaKnown RBP10.69□□□□□ -0.7
Chm-202ENSMUST00000113388 Mrc2Q64449 1479 aa10.68□□□□□ -0.7
Chm-202ENSMUST00000113388 Cux2P70298 1426 aa10.67□□□□□ -0.7
Chm-202ENSMUST00000113388 Unc13aQ4KUS2 1712 aa10.67□□□□□ -0.7
Chm-202ENSMUST00000113388 Pknox2Q8BG99 474 aa10.64□□□□□ -0.71
Chm-202ENSMUST00000113388 Anks4bQ8K3X6 423 aa10.64□□□□□ -0.71
Chm-202ENSMUST00000113388 Wdr66E9Q743 1299 aa10.63□□□□□ -0.71
Chm-202ENSMUST00000113388 Rtl5Q5DTT4 599 aa10.63□□□□□ -0.71
Chm-202ENSMUST00000113388 Gm38655A0A286YDK6 273 aa10.59□□□□□ -0.71
Chm-202ENSMUST00000113388 Cdk11bP24788 784 aaKnown RBP10.59□□□□□ -0.71
Chm-202ENSMUST00000113388 Golga3P55937 1487 aa10.59□□□□□ -0.71
Chm-202ENSMUST00000113388 CatipB9EKE5 520 aa10.54□□□□□ -0.72
Chm-202ENSMUST00000113388 Cep164Q5DU05 1446 aa10.5□□□□□ -0.73
Chm-202ENSMUST00000113388 Chic1Q8CBW7 227 aa10.5□□□□□ -0.73
Chm-202ENSMUST00000113388 Plppr3Q7TPB0 716 aa10.49□□□□□ -0.73
Chm-202ENSMUST00000113388 Gab3Q8BSM5 595 aa10.48□□□□□ -0.73
Chm-202ENSMUST00000113388 Ccdc18Q640L5 1455 aa10.47□□□□□ -0.73
Chm-202ENSMUST00000113388 Lamc3Q9R0B6 1581 aa10.47□□□□□ -0.73
Chm-202ENSMUST00000113388 Baz1bQ9Z277 1479 aa10.46□□□□□ -0.74
Chm-202ENSMUST00000113388 4933416C03RikQ3V063 378 aa10.46□□□□□ -0.74
Chm-202ENSMUST00000113388 Kif21aQ9QXL2 1672 aa10.45□□□□□ -0.74
Chm-202ENSMUST00000113388 Dhx29Q6PGC1 1365 aaKnown RBP10.45□□□□□ -0.74
Chm-202ENSMUST00000113388 Nop58Q6DFW4 536 aaKnown RBP10.43□□□□□ -0.74
Chm-202ENSMUST00000113388 Fam71e1A1L3C1 212 aa10.43□□□□□ -0.74
Chm-202ENSMUST00000113388 Ccdc88bQ4QRL3 1481 aa10.43□□□□□ -0.74
Chm-202ENSMUST00000113388 LrpprcQ6PB66 1392 aaKnown RBP10.41□□□□□ -0.74
Chm-202ENSMUST00000113388 Top2bQ64511 1612 aa10.41□□□□□ -0.74
Chm-202ENSMUST00000113388 Lrriq1Q0P5X1 1673 aa10.4□□□□□ -0.74
Chm-202ENSMUST00000113388 Urb2E9Q7L1 1524 aaKnown RBP10.4□□□□□ -0.74
Chm-202ENSMUST00000113388 Npm2Q80W85 207 aa10.4□□□□□ -0.75
Chm-202ENSMUST00000113388 Fmn1Q05860 1466 aa10.4□□□□□ -0.75
Chm-202ENSMUST00000113388 Plb1Q3TTY0 1478 aa10.38□□□□□ -0.75
Chm-202ENSMUST00000113388 NrdcQ8BHG1 1161 aa10.37□□□□□ -0.75
Chm-202ENSMUST00000113388 Ythdc1E9Q5K9 736 aaKnown RBP10.37□□□□□ -0.75
Chm-202ENSMUST00000113388 4930567H17RikQ3V0K5 233 aa10.36□□□□□ -0.75
Chm-202ENSMUST00000113388 BccipQ9CWI3 316 aa10.36□□□□□ -0.75
Chm-202ENSMUST00000113388 Ifnlr1Q8CGK5 535 aa10.36□□□□□ -0.75
Chm-202ENSMUST00000113388 Camsap1A2AHC3 1581 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 76 ms