RNA–Protein interactions for RNA: ENSMUST00000112456.8

Sh3kbp1-206, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3kbp1, Length 7,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-206ENSMUST00000112456 Ccdc18Q640L5 1455 aa15.47■□□□□ 0.07
Sh3kbp1-206ENSMUST00000112456 Polr3gQ6NXY9 223 aa15.47■□□□□ 0.07
Sh3kbp1-206ENSMUST00000112456 Eif2s2Q99L45 331 aaKnown RBP15.46■□□□□ 0.07
Sh3kbp1-206ENSMUST00000112456 Eea1Q8BL66 1411 aa15.46■□□□□ 0.07
Sh3kbp1-206ENSMUST00000112456 EspnQ9ET47 871 aa15.45■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Irx3P81067 507 aa15.45■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Rsf1E9PWW9 1441 aaKnown RBP15.44■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Trak1Q6PD31 939 aa15.44■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Pip4k2bQ80XI4 416 aa15.44■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Ap3b2Q9JME5 1082 aa15.44■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Ercc6F8VPZ5 1481 aa15.43■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Cabp4Q8VHC5 271 aa15.43■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Odf2A3KGV1 830 aaKnown RBP15.43■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Tpm4Q6IRU2 248 aa15.43■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Ccdc47Q9D024 483 aaKnown RBP15.43■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Pkd2O35245 966 aa15.43■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 BcanQ61361 883 aa15.43■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Pde3bQ61409 1100 aa15.42■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Trim30aP15533 496 aa15.42■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Gabpb2P81069 414 aa15.41■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Ccp110Q7TSH4 1004 aa15.41■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 Ipo8Q7TMY7 1010 aa15.41■□□□□ 0.06
Sh3kbp1-206ENSMUST00000112456 ChgaP26339 463 aaKnown RBP15.39■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Smarce1O54941 411 aaKnown RBP15.39■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Sf3a1Q8K4Z5 791 aaKnown RBP15.38■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Kif3bQ61771 747 aa15.38■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Mbd3Q9Z2D8 285 aaKnown RBP15.38■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Tpm2P58774 284 aa15.37■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Fan1Q69ZT1 1020 aa15.37■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Lemd3Q9WU40 921 aa15.36■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Rsph6aQ8CDR2 708 aa15.36■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Ipo4Q8VI75 1082 aa15.36■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Becn1O88597 448 aa15.36■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Neurod6P48986 337 aa15.36■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 PtmsQ9D0J8 101 aaKnown RBP15.36■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Bcl11aQ9QYE3 773 aa15.35■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Eva1cP58659 440 aa15.35■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Rpap1Q80TE0 1409 aa15.35■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Utp14aQ640M1 767 aaKnown RBP15.34■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 Rock2P70336 1388 aa15.34■□□□□ 0.05
Sh3kbp1-206ENSMUST00000112456 MycnP03966 462 aaKnown RBP15.33■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 March6Q6ZQ89 909 aa15.33■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Bcl2l13P59017 434 aa15.33■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Abl1P00520 1123 aa15.32■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Utp3Q9JI13 469 aaKnown RBP15.32■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Erich4Q3UNU4 136 aa15.32■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Kif27Q7M6Z4 1394 aa15.31■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Zscan21Q07231 555 aa15.31■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Sycp1Q62209 993 aa15.3■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Tsen2Q6P7W5 460 aa15.3■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Tceal9Q9DD24 104 aa15.3■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Tpm1P58771 284 aa15.29■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Stk31Q99MW1 1018 aa15.29■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Nap1l1P28656 391 aaKnown RBP15.29■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Gtf2f1Q3THK3 508 aaKnown RBP15.28■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Kdm4aQ8BW72 1064 aa15.28■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Rfx1P48377 963 aa15.28■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Cabp1Q9JLK7 227 aa15.28■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Nap1l3Q794H2 544 aa15.27■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Rrp12Q6P5B0 1295 aaKnown RBP15.27■□□□□ 0.04
Sh3kbp1-206ENSMUST00000112456 Ccdc60Q8C4J0 545 aa15.27■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Themis2Q91YX0 663 aa15.27■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Gm21190A0A0G2JGJ6 266 aa15.26■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Rbm5Q91YE7 815 aaKnown RBP15.26■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Sh3bgrQ9WUZ7 214 aa15.26■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 CrcpO35427 148 aa15.26■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Hnrnpul1Q8VDM6 859 aaKnown RBP15.26■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Ipo9Q91YE6 1041 aa15.26■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Cplx1P63040 134 aa15.25■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Srcin1Q9QWI6 1250 aa15.25■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Rec8Q8C5S7 591 aa15.25■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Mink1Q9JM52 1308 aa15.24■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Phactr2B1AVP0 632 aa15.24■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Chmp7Q8R1T1 451 aa15.24■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Abcc8B2RUS7 1588 aa15.24■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Nol12Q8BG17 217 aa15.24■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Mia2Q91ZV0 1396 aa15.23■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Mphosph9A6H5Y1 991 aa15.23■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Ddx11Q6AXC6 880 aa15.23■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Bicd2Q921C5 820 aa15.23■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Cdca7Q9D0M2 382 aa15.23■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Rsph4aQ8BYM7 716 aa15.23■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Filip1lQ6P6L0 1131 aa15.22■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Smc4Q8CG47 1286 aa15.22■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Rad54l2Q99NG0 1466 aa15.22■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Shq1Q7TMX5 569 aa15.21■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Triml2E9PW10 424 aa15.21■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Commd10Q8JZY2 202 aa15.21■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 IkQ9Z1M8 557 aaKnown RBP15.21■□□□□ 0.03
Sh3kbp1-206ENSMUST00000112456 Sf3b2Q3UJB0 878 aaKnown RBP15.21■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 Sugp2Q8CH09 1067 aa15.2■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 CenpjQ569L8 1344 aa15.2■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 Mad1l1Q9WTX8 717 aaKnown RBP15.19■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 Cspp1B2RX88 1205 aa15.19■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 Atp6v1dP57746 247 aa15.19■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 St18Q80TY4 1045 aa15.19■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 Q8C5K5 320 aa15.19■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 Fyb1O35601 819 aa15.18■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 Nectin2P32507 530 aa15.17■□□□□ 0.02
Sh3kbp1-206ENSMUST00000112456 Nutm1Q8BHP2 1126 aa15.17■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms