RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Pdcl3Q8BVF2 240 aa17.29■□□□□ 0.36
Col7a1-202ENSMUST00000112070 CrebrfQ8CDG5 640 aaKnown RBP17.29■□□□□ 0.36
Col7a1-202ENSMUST00000112070 Cplx2P84086 134 aa17.29■□□□□ 0.36
Col7a1-202ENSMUST00000112070 Q3TQI7 289 aaKnown RBP17.29■□□□□ 0.36
Col7a1-202ENSMUST00000112070 SlkO54988 1233 aa17.28■□□□□ 0.36
Col7a1-202ENSMUST00000112070 Aebp2Q9Z248 504 aaKnown RBP17.28■□□□□ 0.36
Col7a1-202ENSMUST00000112070 Gprasp1Q5U4C1 1347 aa17.27■□□□□ 0.36
Col7a1-202ENSMUST00000112070 Gps2Q921N8 327 aa17.27■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Speer4f1Q9D5Q6 258 aa17.27■□□□□ 0.35
Col7a1-202ENSMUST00000112070 HmmrQ00547 794 aaKnown RBP17.26■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Vps53Q8CCB4 832 aa17.26■□□□□ 0.35
Col7a1-202ENSMUST00000112070 NgefQ8CHT1 710 aa17.25■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Prm3Q62100 101 aa17.25■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Rab11fip3Q8CHD8 1047 aa17.25■□□□□ 0.35
Col7a1-202ENSMUST00000112070 U2surpQ6NV83 1029 aaKnown RBP17.25■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Rrp7aQ9D1C9 280 aaKnown RBP17.24■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Kif15Q6P9L6 1387 aa17.24■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Necab1Q8BG18 352 aa17.24■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Gripap1Q8VD04 806 aa17.24■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Brpf1B2RRD7 1212 aa17.23■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Casq1O09165 405 aa17.23■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Kif4P33174 1231 aa17.23■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Tmco5bQ80X59 307 aa17.22■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Rsph4aQ8BYM7 716 aa17.22■□□□□ 0.35
Col7a1-202ENSMUST00000112070 KinQ8K339 391 aa17.22■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Mns1Q61884 491 aa17.21■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Krt82Q99M74 516 aa17.21■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Utp3Q9JI13 469 aaKnown RBP17.21■□□□□ 0.35
Col7a1-202ENSMUST00000112070 Gtf2e1Q9D0D5 440 aa17.2■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Podxl2Q8CAE9 603 aa17.19■□□□□ 0.34
Col7a1-202ENSMUST00000112070 U2af1Q9D883 239 aaKnown RBP17.19■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Rnf20Q5DTM8 973 aa17.19■□□□□ 0.34
Col7a1-202ENSMUST00000112070 PhaxQ9JJT9 385 aaKnown RBP17.18■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Stk24Q99KH8 431 aa17.18■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Gpatch3Q8BIY1 525 aa17.18■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Pnmal2G3X9N3 661 aa17.18■□□□□ 0.34
Col7a1-202ENSMUST00000112070 GorabQ8BRM2 368 aa17.18■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Tnnt1O88346 262 aa17.17■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Def6Q8C2K1 630 aa17.17■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Ccdc43Q9CR29 222 aaKnown RBP17.17■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Chmp3Q9CQ10 224 aa17.17■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Sycp1Q62209 993 aa17.16■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Slc4a3P16283 1227 aa17.15■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Rrp9Q91WM3 475 aaKnown RBP17.15■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Wdr78E9PYY5 807 aa17.15■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Smc4Q8CG47 1286 aa17.15■□□□□ 0.34
Col7a1-202ENSMUST00000112070 Rundc1Q0VDN7 615 aa17.14■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Kif16bB1AVY7 1312 aa17.14■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Rec8Q8C5S7 591 aa17.14■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Lrrcc1Q69ZB0 1026 aa17.13■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Mrvi1Q9WUX5 899 aaKnown RBP17.13■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Ubxn4Q8VCH8 506 aa17.12■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Plekhh2Q8C115 1491 aa17.12■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Cplx1P63040 134 aa17.12■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Erlin2Q8BFZ9 340 aa17.12■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Cchcr1Q8K2I2 770 aa17.11■□□□□ 0.33
Col7a1-202ENSMUST00000112070 UvssaQ9D479 717 aa17.11■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Cep112Q5PR68 954 aa17.11■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Cdkn1cP49919 348 aa17.11■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Znf771Q8BJ90 317 aa17.11■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Drc7Q6V3W6 876 aa17.1■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Ak7Q9D2H2 614 aa17.1■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Trim55G3X8Y1 545 aa17.1■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Luc7lQ9CYI4 371 aaKnown RBP17.1■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Polr1aO35134 1717 aaKnown RBP17.09■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Arhgap27A2AB59 869 aa17.09■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Ciz1Q8VEH2 845 aa17.09■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Baz1bQ9Z277 1479 aa17.08■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Rabep1O35551 862 aa17.08■□□□□ 0.33
Col7a1-202ENSMUST00000112070 Cnga1P29974 684 aa17.08■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Arid4aF8VPQ2 1261 aaKnown RBP17.08■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Dhx57Q6P5D3 1388 aaKnown RBP17.08■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Ppp4r3bQ922R5 820 aa17.07■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Dixdc1Q80Y83 711 aa17.07■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Ksr2Q3UVC0 959 aa17.07■□□□□ 0.32
Col7a1-202ENSMUST00000112070 SafbD3YXK2 937 aaKnown RBP17.07■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Trim29Q8R2Q0 587 aa17.06■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Tomm22Q9CPQ3 142 aa17.05■□□□□ 0.32
Col7a1-202ENSMUST00000112070 OptnQ8K3K8 584 aa17.05■□□□□ 0.32
Col7a1-202ENSMUST00000112070 TxlnbQ8VBT1 685 aa17.05■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Kif27Q7M6Z4 1394 aa17.05■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Bicd2Q921C5 820 aa17.05■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Pkd2O35245 966 aa17.05■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Pip4k2aO70172 405 aa17.05■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Kiaa0753Q6A000 959 aa17.04■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Cluap1Q8R3P7 413 aa17.04■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Fam193aQ8CGI1 1231 aaKnown RBP17.04■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Hoxa7P02830 229 aa17.04■□□□□ 0.32
Col7a1-202ENSMUST00000112070 PdcQ9QW08 244 aa17.04■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Smc2Q8CG48 1191 aaKnown RBP17.03■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Mical1Q8VDP3 1048 aa17.03■□□□□ 0.32
Col7a1-202ENSMUST00000112070 MyclP10166 368 aa17.03■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Map4P27546 1125 aaKnown RBP17.03■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Exoc6Q8R313 802 aa17.02■□□□□ 0.32
Col7a1-202ENSMUST00000112070 CenpjQ569L8 1344 aa17.02■□□□□ 0.32
Col7a1-202ENSMUST00000112070 Fmn1Q05860 1466 aa17.02■□□□□ 0.31
Col7a1-202ENSMUST00000112070 Rock1P70335 1354 aa17.02■□□□□ 0.31
Col7a1-202ENSMUST00000112070 March6Q6ZQ89 909 aa17.02■□□□□ 0.31
Col7a1-202ENSMUST00000112070 Tceal9Q9DD24 104 aa17.02■□□□□ 0.31
Col7a1-202ENSMUST00000112070 Ifit1bl1D3Z6F0 470 aa17.01■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms