RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Ncoa2Q61026 1462 aa15.16■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Tsen2Q6P7W5 460 aa15.16■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Pak3Q61036 559 aa15.15■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Pank3Q8R2W9 370 aa15.15■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Cabp4Q8VHC5 271 aa15.15■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Shq1Q7TMX5 569 aa15.14■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Pibf1E9Q6K3 756 aa15.14■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Irx3P81067 507 aa15.14■□□□□ 0.01
Col8a1-201ENSMUST00000089332 R3hcc1Q8BSI6 488 aa15.14■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Senp3Q9EP97 568 aaKnown RBP15.14■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Tdrd9Q14BI7 1383 aa15.13■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Ipo8Q7TMY7 1010 aa15.13■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Usp40Q8BWR4 1235 aa15.13■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Smg6P61406 1418 aaKnown RBP15.12■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Smarce1O54941 411 aaKnown RBP15.12■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Rab11fip3Q8CHD8 1047 aa15.12■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Cc2d2bA0A286YDU8 1405 aa15.12■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Tpm3-rs7D3Z2H9 248 aa15.11■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Pcmtd1P59913 357 aa15.11■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Brpf1B2RRD7 1212 aa15.11■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Mfap1aC0HKD8 439 aaKnown RBP15.11■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Mfap1bC0HKD9 439 aaKnown RBP15.11■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Inpp5dQ9ES52 1191 aa15.1■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Cgnl1Q6AW69 1298 aa15.1■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Fam184bQ0KK56 942 aa15.09■□□□□ 0.01
Col8a1-201ENSMUST00000089332 Efcab5A0JP43 1406 aa15.09■□□□□ 0.01
Col8a1-201ENSMUST00000089332 CgnP59242 1191 aa15.08■□□□□ 0.01
Col8a1-201ENSMUST00000089332 ErbinQ80TH2 1402 aa15.07■□□□□ 0
Col8a1-201ENSMUST00000089332 Nsd2Q8BVE8 1365 aa15.07■□□□□ 0
Col8a1-201ENSMUST00000089332 Shroom4Q1W617 1475 aa15.07■□□□□ 0
Col8a1-201ENSMUST00000089332 Atp6v1dP57746 247 aa15.07■□□□□ 0
Col8a1-201ENSMUST00000089332 GsdmaQ9EST1 446 aa15.06■□□□□ 0
Col8a1-201ENSMUST00000089332 Mink1Q9JM52 1308 aa15.06■□□□□ 0
Col8a1-201ENSMUST00000089332 Rock1P70335 1354 aa15.05■□□□□ 0
Col8a1-201ENSMUST00000089332 GorabQ8BRM2 368 aa15.05■□□□□ 0
Col8a1-201ENSMUST00000089332 Erich6bQ9D4S6 220 aa15.05■□□□□ 0
Col8a1-201ENSMUST00000089332 Smc4Q8CG47 1286 aa15.05■□□□□ -0
Col8a1-201ENSMUST00000089332 Dapk1Q80YE7 1442 aa15.04■□□□□ -0
Col8a1-201ENSMUST00000089332 Kif7B7ZNG0 1348 aa15.04■□□□□ -0
Col8a1-201ENSMUST00000089332 Rad54l2Q99NG0 1466 aa15.04■□□□□ -0
Col8a1-201ENSMUST00000089332 Ccdc60Q8C4J0 545 aa15.04■□□□□ -0
Col8a1-201ENSMUST00000089332 Slc4a10Q5DTL9 1118 aa15.03■□□□□ -0
Col8a1-201ENSMUST00000089332 Cc2d2aQ8CFW7 1633 aa15.02□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Ralbp1Q62172 648 aa15.01□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Top2aQ01320 1528 aaKnown RBP15.01□□□□□ -0.01
Col8a1-201ENSMUST00000089332 AU015836B2RUM3 263 aa15.01□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Gm21190A0A0G2JGJ6 266 aa15.01□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Prdm16A2A935 1275 aa15.01□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Chmp7Q8R1T1 451 aa15.01□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Dnttip2Q8R2M2 758 aaKnown RBP15.01□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Zfp644E9QA22 1323 aa15.01□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Ipo9Q91YE6 1041 aa15□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Cux1P53564 1515 aa15□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Ccdc146E9Q9F7 977 aa15□□□□□ -0.01
Col8a1-201ENSMUST00000089332 G3bp1P97855 465 aaKnown RBP15□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Ccdc47Q9D024 483 aaKnown RBP14.99□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Calcoco2A2A6M5 331 aa14.99□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Fyb1O35601 819 aa14.99□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Zscan10Q3URR7 782 aa14.99□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Nolc1E9Q5C9 702 aaKnown RBP14.98□□□□□ -0.01
Col8a1-201ENSMUST00000089332 CrebrfQ8CDG5 640 aaKnown RBP14.98□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Naip1Q9QWK5 1403 aa14.98□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Esx1O88933 382 aa14.98□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Polr1aO35134 1717 aaKnown RBP14.98□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Ciz1Q8VEH2 845 aa14.97□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Ankrd36D3Z4K0 1415 aa14.97□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Ylpm1Q9R0I7 1386 aaKnown RBP14.96□□□□□ -0.01
Col8a1-201ENSMUST00000089332 Cald1E9QA15 768 aaKnown RBP14.96□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Gsto1O09131 240 aa14.95□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Duox2A2AQ99 1517 aa14.95□□□□□ -0.02
Col8a1-201ENSMUST00000089332 AampJ3QN89 436 aa14.95□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Ppm1fQ8CGA0 452 aa14.95□□□□□ -0.02
Col8a1-201ENSMUST00000089332 AppP12023 770 aa14.94□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Ccer1Q9CQL2 403 aa14.94□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Pde4cQ3UEI1 686 aa14.94□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Gsdma3Q5Y4Y6 464 aa14.94□□□□□ -0.02
Col8a1-201ENSMUST00000089332 FanciQ8K368 1330 aa14.93□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Urb2E9Q7L1 1524 aaKnown RBP14.93□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Vps8Q0P5W1 1427 aa14.93□□□□□ -0.02
Col8a1-201ENSMUST00000089332 NrkQ9R0G8 1455 aa14.92□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Tceal9Q9DD24 104 aa14.92□□□□□ -0.02
Col8a1-201ENSMUST00000089332 PnisrA2AJT4 805 aaKnown RBP14.92□□□□□ -0.02
Col8a1-201ENSMUST00000089332 RdxP26043 583 aaKnown RBP14.91□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Ddx11Q6AXC6 880 aa14.91□□□□□ -0.02
Col8a1-201ENSMUST00000089332 ChgaP26339 463 aaKnown RBP14.9□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Cplx2P84086 134 aa14.9□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Puf60Q3UEB3 564 aaKnown RBP14.9□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Arap1Q4LDD4 1452 aa14.9□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Rpgrip1lQ8CG73 1264 aa14.9□□□□□ -0.02
Col8a1-201ENSMUST00000089332 Tpd52l1O54818 204 aa14.9□□□□□ -0.02
Col8a1-201ENSMUST00000089332 MsnP26041 577 aaKnown RBP14.89□□□□□ -0.03
Col8a1-201ENSMUST00000089332 Gnai1B2RSH2 354 aa14.89□□□□□ -0.03
Col8a1-201ENSMUST00000089332 Gnai3Q9DC51 354 aa14.89□□□□□ -0.03
Col8a1-201ENSMUST00000089332 Atf3Q60765 181 aa14.89□□□□□ -0.03
Col8a1-201ENSMUST00000089332 St18Q80TY4 1045 aa14.89□□□□□ -0.03
Col8a1-201ENSMUST00000089332 Trim58Q5NCC9 485 aa14.88□□□□□ -0.03
Col8a1-201ENSMUST00000089332 Bcl11bQ99PV8 884 aa14.88□□□□□ -0.03
Col8a1-201ENSMUST00000089332 Ift140E9PY46 1464 aa14.88□□□□□ -0.03
Col8a1-201ENSMUST00000089332 Cspp1B2RX88 1205 aa14.88□□□□□ -0.03
Col8a1-201ENSMUST00000089332 Filip1lQ6P6L0 1131 aa14.88□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms