RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Plb1Q3TTY0 1478 aa19.46■□□□□ 0.71
Ushbp1-201ENSMUST00000049184 Magi3Q9EQJ9 1476 aa19.44■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Cpsf1Q9EPU4 1441 aaKnown RBP19.44■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Mre11Q61216 706 aa19.44■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Supt6hQ62383 1726 aaKnown RBP19.43■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Dnai1Q8C0M8 701 aa19.43■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 WizO88286 1684 aaKnown RBP19.43■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Adcy10Q8C0T9 1614 aa19.42■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 EspnQ9ET47 871 aa19.42■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Zmym4A2A791 1549 aaKnown RBP19.41■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Adamts12Q811B3 1600 aa19.4■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Kdm2bQ6P1G2 1309 aa19.4■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 WrnO09053 1401 aa19.4■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 NudcO35685 332 aaKnown RBP19.4■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Polr3aB2RXC6 1390 aa19.39■□□□□ 0.7
Ushbp1-201ENSMUST00000049184 Nup155Q99P88 1391 aaKnown RBP19.38■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Asxl1P59598 1514 aa19.38■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Dbr1Q923B1 550 aa19.38■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Grin2aP35436 1464 aa19.38■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Ppm1gQ61074 542 aa19.37■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Mrc2Q64449 1479 aa19.37■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Gapvd1Q6PAR5 1458 aa19.36■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Rapgef6Q5NCJ1 1609 aa19.36■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Ttc41Q692V3 1318 aa19.36■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Chmp5Q9D7S9 219 aa19.35■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Ak9G3UYQ4 1894 aa19.34■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 PxdnQ3UQ28 1475 aa19.34■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Trpm2Q91YD4 1506 aa19.34■□□□□ 0.69
Ushbp1-201ENSMUST00000049184 Rwdd1Q9CQK7 243 aa19.32■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Cc2d2bA0A286YDU8 1405 aa19.32■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Zbtb4Q5F293 982 aa19.32■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Pknox2Q8BG99 474 aa19.32■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Pdlim2Q8R1G6 349 aa19.32■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Kif16bB1AVY7 1312 aa19.31■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Rock1P70335 1354 aa19.31■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Kdm5cP41230 1554 aa19.31■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Esx1O88933 382 aa19.31■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Map4P27546 1125 aaKnown RBP19.31■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Pank3Q8R2W9 370 aa19.31■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Cdc42bpaQ3UU96 1719 aa19.3■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Arhgef11Q68FM7 1552 aa19.3■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Arid4bA2CG63 1314 aaKnown RBP19.3■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Tubgcp6G5E8P0 1769 aa19.3■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Iqgap1Q9JKF1 1657 aaKnown RBP19.29■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Kiaa1551Q5DTW7 1521 aa19.28■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Zmym3Q9JLM4 1370 aa19.28■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 Inpp5dQ9ES52 1191 aa19.27■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 CrbnQ8C7D2 445 aa19.27■□□□□ 0.68
Ushbp1-201ENSMUST00000049184 PrxO55103 1391 aa19.27■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Mroh3A0A1D5RM54 893 aa19.26■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Arhgap31A6X8Z5 1425 aa19.26■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Smc5Q8CG46 1101 aaKnown RBP19.26■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Kcnn1Q9EQR3 537 aa19.26■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Ccdc141E9Q8Q6 1531 aa19.26■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Dot1lQ6XZL8 1540 aa19.26■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Setd1aE9PYH6 1716 aa19.25■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Tex14Q7M6U3 1450 aa19.25■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Plch2A2AP18 1501 aa19.24■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Plekhh1Q80TI1 1356 aa19.23■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Zscan10Q3URR7 782 aa19.22■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Eif2s2Q99L45 331 aaKnown RBP19.22■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Tarbp1E9Q368 1579 aa19.22■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Mapk8ip3Q9ESN9 1337 aa19.22■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Ipo8Q7TMY7 1010 aa19.22■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Tdrd9Q14BI7 1383 aa19.21■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Pdcl3Q8BVF2 240 aa19.21■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Apbb1Q9QXJ1 710 aa19.21■□□□□ 0.67
Ushbp1-201ENSMUST00000049184 Trim30dE9PWL0 497 aa19.2■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Ak7Q9D2H2 614 aa19.19■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Abca16E9PWJ7 1678 aa19.19■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Clasp1Q80TV8 1535 aaKnown RBP19.19■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Hsp90ab1P11499 724 aaKnown RBP19.19■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 PtprgQ05909 1442 aa19.18■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Tmf1B9EKI3 1091 aa19.17■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Dcaf11Q91VU6 549 aa19.17■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Eif4g3Q80XI3 1579 aaKnown RBP19.17■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Ppp2r1aQ76MZ3 589 aa19.16■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Fam163aQ8CAA5 168 aa19.16■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Tmc1Q8R4P5 757 aa19.16■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Mlh3A0A1Y7VMP7 1443 aa19.16■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Ppp1r9bQ6R891 817 aaKnown RBP19.15■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Magi1Q6RHR9 1471 aa19.15■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Mapkbp1Q6NS57 1503 aa19.14■□□□□ 0.66
Ushbp1-201ENSMUST00000049184 Gm14025A2AP89 1413 aa19.14■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 AU015836B2RUM3 263 aa19.13■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Htatsf1Q8BGC0 757 aa19.13■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Ifit1bl1D3Z6F0 470 aa19.12■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 4930567H17RikQ3V0K5 233 aa19.12■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Clstn2Q9ER65 966 aa19.12■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Shroom2A2ALU4 1481 aa19.12■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Caskin1Q6P9K8 1431 aa19.11■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Rrbp1Q99PL5 1605 aaKnown RBP19.11■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Ccdc183A2AJB1 534 aa19.11■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Zbtb7cQ8VCZ7 619 aa19.11■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Speer4f1Q9D5Q6 258 aa19.11■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Atf7ipQ7TT18 1306 aa19.1■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Rab3gap2Q8BMG7 1366 aa19.1■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Gtf2a1Q99PM3 378 aa19.1■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Fmn2Q9JL04 1578 aa19.09■□□□□ 0.65
Ushbp1-201ENSMUST00000049184 Prex2Q3LAC4 1598 aa19.08■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms