RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Ipo9Q91YE6 1041 aa17.8■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Trim30aP15533 496 aa17.8■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Lemd3Q9WU40 921 aa17.79■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Cabp1Q9JLK7 227 aa17.78■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Ftsj3Q9DBE9 838 aaKnown RBP17.78■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Wdr78E9PYY5 807 aa17.78■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Kif3bQ61771 747 aa17.78■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Krt82Q99M74 516 aa17.77■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Mphosph9A6H5Y1 991 aa17.77■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Paf1Q8K2T8 535 aa17.76■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Fan1Q69ZT1 1020 aa17.76■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Ccar1Q8CH18 1146 aaKnown RBP17.76■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Chmp4cQ9D7F7 232 aa17.75■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Hdgfl1Q2VPR5 283 aa17.74■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Fnbp4Q6ZQ03 1031 aa17.74■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Ccdc47Q9D024 483 aaKnown RBP17.74■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Ap3b2Q9JME5 1082 aa17.74■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Gm21969J3QJZ1 289 aa17.74■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Sf3a1Q8K4Z5 791 aaKnown RBP17.74■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Polr3gQ6NXY9 223 aa17.73■□□□□ 0.43
Col4a1-201ENSMUST00000033898 IbspQ61711 324 aa17.73■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Rrp12Q6P5B0 1295 aaKnown RBP17.73■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Eif2s2Q99L45 331 aaKnown RBP17.73■□□□□ 0.43
Col4a1-201ENSMUST00000033898 FosbP13346 338 aa17.73■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Dhx16G3X8X0 1044 aaKnown RBP17.73■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Cabp4Q8VHC5 271 aa17.73■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Srcin1Q9QWI6 1250 aa17.71■□□□□ 0.43
Col4a1-201ENSMUST00000033898 Aebp1Q640N1 1128 aa17.71■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Tsen2Q6P7W5 460 aa17.71■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Utp14aQ640M1 767 aaKnown RBP17.69■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Becn1O88597 448 aa17.69■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Znf704Q9ERQ3 566 aa17.69■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Tpm4Q6IRU2 248 aa17.69■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Gabpb2P81069 414 aa17.68■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Ccdc43Q9CR29 222 aaKnown RBP17.67■□□□□ 0.42
Col4a1-201ENSMUST00000033898 A0A0U1RNP2 1173 aa17.67■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Ccdc60Q8C4J0 545 aa17.67■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Stk31Q99MW1 1018 aa17.67■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Nup155Q99P88 1391 aaKnown RBP17.65■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Tpm2P58774 284 aa17.65■□□□□ 0.42
Col4a1-201ENSMUST00000033898 Odf2A3KGV1 830 aaKnown RBP17.64■□□□□ 0.42
Col4a1-201ENSMUST00000033898 NacadQ5SWP3 1504 aa17.64■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Rfx1P48377 963 aa17.64■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Utp3Q9JI13 469 aaKnown RBP17.64■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Nap1l3Q794H2 544 aa17.63■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Atp6v1dP57746 247 aa17.63■□□□□ 0.41
Col4a1-201ENSMUST00000033898 CenpjQ569L8 1344 aa17.63■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Bcl11bQ99PV8 884 aa17.63■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Ccp110Q7TSH4 1004 aa17.62■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Pank3Q8R2W9 370 aa17.61■□□□□ 0.41
Col4a1-201ENSMUST00000033898 BcanQ61361 883 aa17.61■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Cspp1B2RX88 1205 aa17.61■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Ylpm1Q9R0I7 1386 aaKnown RBP17.6■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Tceal9Q9DD24 104 aa17.6■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Neurod6P48986 337 aa17.6■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Tpm1P58771 284 aa17.6■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Sh3bgrQ9WUZ7 214 aa17.59■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Filip1lQ6P6L0 1131 aa17.59■□□□□ 0.41
Col4a1-201ENSMUST00000033898 Nolc1E9Q5C9 702 aaKnown RBP17.58■□□□□ 0.4
Col4a1-201ENSMUST00000033898 VgfQ0VGU4 617 aa17.58■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Ipo4Q8VI75 1082 aa17.58■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Ccdc96Q9CR92 584 aa17.58■□□□□ 0.4
Col4a1-201ENSMUST00000033898 St18Q80TY4 1045 aa17.58■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Rsph3aQ3UFY4 516 aa17.57■□□□□ 0.4
Col4a1-201ENSMUST00000033898 AcrbpQ3V140 540 aa17.57■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Podxl2Q8CAE9 603 aa17.57■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Sytl4Q9R0Q1 673 aa17.57■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Triml2E9PW10 424 aa17.57■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Mink1Q9JM52 1308 aa17.57■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Shq1Q7TMX5 569 aa17.56■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Phactr2B1AVP0 632 aa17.56■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Rec8Q8C5S7 591 aa17.55■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Bcl2l13P59017 434 aa17.55■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Gm21190A0A0G2JGJ6 266 aa17.54■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Bicd2Q921C5 820 aa17.54■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Klf15Q9EPW2 415 aa17.54■□□□□ 0.4
Col4a1-201ENSMUST00000033898 G3bp1P97855 465 aaKnown RBP17.54■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Arhgap35Q91YM2 1499 aa17.54■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Inpp5dQ9ES52 1191 aa17.53■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Baz1aO88379 1555 aa17.53■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Cplx1P63040 134 aa17.53■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Smc4Q8CG47 1286 aa17.53■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Fyco1Q8VDC1 1437 aa17.53■□□□□ 0.4
Col4a1-201ENSMUST00000033898 March6Q6ZQ89 909 aa17.53■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Ddrgk1Q80WW9 315 aa17.52■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Chmp7Q8R1T1 451 aa17.52■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Casq1O09165 405 aa17.52■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Hnrnpul1Q8VDM6 859 aaKnown RBP17.52■□□□□ 0.4
Col4a1-201ENSMUST00000033898 Cgnl1Q6AW69 1298 aa17.52■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Eva1cP58659 440 aa17.51■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Ripply1Q2WG77 201 aa17.5■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Gtf2f1Q3THK3 508 aaKnown RBP17.5■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Nol12Q8BG17 217 aa17.5■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Srek1Q8BZX4 494 aaKnown RBP17.5■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Rsph6aQ8CDR2 708 aa17.5■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Pip4k2bQ80XI4 416 aa17.5■□□□□ 0.39
Col4a1-201ENSMUST00000033898 CrcpO35427 148 aa17.5■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Usp40Q8BWR4 1235 aa17.49■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Ddx11Q6AXC6 880 aa17.49■□□□□ 0.39
Col4a1-201ENSMUST00000033898 Abl1P00520 1123 aa17.48■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms