RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Plin1Q8CGN5 517 aa17.25■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Ankrd26Q811D2 1581 aa17.25■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Fam184bQ0KK56 942 aa17.25■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Tmco5bQ80X59 307 aa17.24■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Naip5Q9R016 1403 aa17.24■□□□□ 0.35
Scarb2-201ENSMUST00000031377 CadpsQ80TJ1 1355 aa17.23■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Wdr62Q3U3T8 1523 aa17.23■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Kif7B7ZNG0 1348 aa17.23■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Ttll13A4Q9F6 804 aa17.23■□□□□ 0.35
Scarb2-201ENSMUST00000031377 EprsQ8CGC7 1512 aaKnown RBP17.22■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Mfap1aC0HKD8 439 aaKnown RBP17.22■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Mfap1bC0HKD9 439 aaKnown RBP17.22■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Lamc3Q9R0B6 1581 aa17.22■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Ythdc1E9Q5K9 736 aaKnown RBP17.22■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Map7O88735 730 aa17.22■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Spag9Q58A65 1321 aaKnown RBP17.21■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Dnttip2Q8R2M2 758 aaKnown RBP17.21■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Prkrip1Q9CWV6 186 aaKnown RBP17.21■□□□□ 0.35
Scarb2-201ENSMUST00000031377 Eif2s2Q99L45 331 aaKnown RBP17.2■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Lemd3Q9WU40 921 aa17.2■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Gtf3c3Q3TMP1 882 aa17.2■□□□□ 0.34
Scarb2-201ENSMUST00000031377 NudcO35685 332 aaKnown RBP17.2■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Jph4Q80WT0 628 aa17.2■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Plekhg5Q66T02 1073 aa17.19■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Ncoa2Q61026 1462 aa17.19■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Usp40Q8BWR4 1235 aa17.18■□□□□ 0.34
Scarb2-201ENSMUST00000031377 NgefQ8CHT1 710 aa17.18■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Arhgap31A6X8Z5 1425 aa17.16■□□□□ 0.34
Scarb2-201ENSMUST00000031377 PtmaP26350 111 aa17.16■□□□□ 0.34
Scarb2-201ENSMUST00000031377 U2surpQ6NV83 1029 aaKnown RBP17.16■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Ccdc30Q8BVF4 654 aa17.16■□□□□ 0.34
Scarb2-201ENSMUST00000031377 NexmifQ5DTT1 1515 aa17.16■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Ak7Q9D2H2 614 aa17.15■□□□□ 0.34
Scarb2-201ENSMUST00000031377 Kif16bB1AVY7 1312 aa17.14■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Urb2E9Q7L1 1524 aaKnown RBP17.14■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Abcc5Q9R1X5 1436 aa17.14■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Birc3O08863 600 aa17.14■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Myom3A2ABU4 1439 aa17.13■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Ncoa1P70365 1447 aa17.13■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Pank1Q8K4K6 548 aa17.13■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Tsen2Q6P7W5 460 aa17.12■□□□□ 0.33
Scarb2-201ENSMUST00000031377 GorabQ8BRM2 368 aa17.12■□□□□ 0.33
Scarb2-201ENSMUST00000031377 KnstrnQ9D9Z1 312 aaKnown RBP17.12■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Znf316Q6PGE4 1016 aa17.11■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Pde4cQ3UEI1 686 aa17.11■□□□□ 0.33
Scarb2-201ENSMUST00000031377 AU015836B2RUM3 263 aa17.1■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Ppp2r1aQ76MZ3 589 aa17.1■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Gm1043A0A140LJC2 1431 aa17.09■□□□□ 0.33
Scarb2-201ENSMUST00000031377 SynmQ70IV5 1561 aa17.09■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Lmod3E9QA62 571 aa17.09■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Ccar1Q8CH18 1146 aaKnown RBP17.09■□□□□ 0.33
Scarb2-201ENSMUST00000031377 Cd109Q8R422 1442 aa17.08■□□□□ 0.32
Scarb2-201ENSMUST00000031377 GsdmaQ9EST1 446 aa17.08■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Liat1Q810M6 228 aa17.07■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Map3k5O35099 1380 aa17.07■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Mre11Q61216 706 aa17.07■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Safb2Q80YR5 991 aaKnown RBP17.07■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Mug1P28665 1476 aa17.07■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Ralbp1Q62172 648 aa17.06■□□□□ 0.32
Scarb2-201ENSMUST00000031377 KarsQ99MN1 595 aaKnown RBP17.06■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Il16O54824 1322 aa17.06■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Iqcf3Q9D498 203 aa17.05■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Ccdc60Q8C4J0 545 aa17.04■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Rprd2Q6NXI6 1469 aaKnown RBP17.04■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Plb1Q3TTY0 1478 aa17.03■□□□□ 0.32
Scarb2-201ENSMUST00000031377 Pibf1E9Q6K3 756 aa17.02■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Trim58Q5NCC9 485 aa17.02■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Chmp4bQ9D8B3 224 aaKnown RBP17.02■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Stard8Q8K031 1019 aa17.02■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Plekhh1Q80TI1 1356 aa17.01■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Hsp90b1P08113 802 aaKnown RBP17.01■□□□□ 0.31
Scarb2-201ENSMUST00000031377 PrxO55103 1391 aa17.01■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Ccdc183A2AJB1 534 aa17■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Plcd4Q8K3R3 807 aa17■□□□□ 0.31
Scarb2-201ENSMUST00000031377 TnnQ80Z71 1560 aa16.99■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Soga1E1U8D0 1418 aa16.98■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Gpatch8A2A6A1 1505 aa16.98■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Ylpm1Q9R0I7 1386 aaKnown RBP16.98■□□□□ 0.31
Scarb2-201ENSMUST00000031377 SlkO54988 1233 aa16.98■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Fam163aQ8CAA5 168 aa16.98■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Erich6bQ9D4S6 220 aa16.98■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Utp14aQ640M1 767 aaKnown RBP16.97■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Mink1Q9JM52 1308 aa16.97■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Rab3gap2Q8BMG7 1366 aa16.97■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Apaf1O88879 1249 aa16.97■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Rfx1P48377 963 aa16.97■□□□□ 0.31
Scarb2-201ENSMUST00000031377 Ccdc146E9Q9F7 977 aa16.96■□□□□ 0.31
Scarb2-201ENSMUST00000031377 CenpjQ569L8 1344 aa16.96■□□□□ 0.31
Scarb2-201ENSMUST00000031377 ErbinQ80TH2 1402 aa16.95■□□□□ 0.3
Scarb2-201ENSMUST00000031377 Thoc2B1AZI6 1594 aaKnown RBP16.95■□□□□ 0.3
Scarb2-201ENSMUST00000031377 Nutm1Q8BHP2 1126 aa16.95■□□□□ 0.3
Scarb2-201ENSMUST00000031377 Puf60Q3UEB3 564 aaKnown RBP16.94■□□□□ 0.3
Scarb2-201ENSMUST00000031377 HnrnpuQ8VEK3 800 aaKnown RBP16.94■□□□□ 0.3
Scarb2-201ENSMUST00000031377 Arhgap5P97393 1501 aa16.94■□□□□ 0.3
Scarb2-201ENSMUST00000031377 Rfx7F8VPJ6 1459 aa16.93■□□□□ 0.3
Scarb2-201ENSMUST00000031377 Nsd2Q8BVE8 1365 aa16.93■□□□□ 0.3
Scarb2-201ENSMUST00000031377 G3bp1P97855 465 aaKnown RBP16.93■□□□□ 0.3
Scarb2-201ENSMUST00000031377 BC005561E9Q5E2 1589 aa16.93■□□□□ 0.3
Scarb2-201ENSMUST00000031377 Nectin2P32507 530 aa16.93■□□□□ 0.3
Scarb2-201ENSMUST00000031377 Tspyl2Q7TQI8 677 aa16.93■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms