RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Gm32742A0A1B0GT42 1604 aa13.75□□□□□ -0.21
Rnft1-201ENSMUST00000020827 Ifit1bl1D3Z6F0 470 aa13.75□□□□□ -0.21
Rnft1-201ENSMUST00000020827 PnisrA2AJT4 805 aaKnown RBP13.75□□□□□ -0.21
Rnft1-201ENSMUST00000020827 Chd1P40201 1711 aa13.74□□□□□ -0.21
Rnft1-201ENSMUST00000020827 Erich6D3Z6S9 713 aa13.74□□□□□ -0.21
Rnft1-201ENSMUST00000020827 Naip6Q9JIB6 1403 aa13.74□□□□□ -0.21
Rnft1-201ENSMUST00000020827 Fancd2Q80V62 1450 aa13.73□□□□□ -0.21
Rnft1-201ENSMUST00000020827 Kdm2aP59997 1161 aa13.72□□□□□ -0.21
Rnft1-201ENSMUST00000020827 Adamts13Q769J6 1426 aa13.71□□□□□ -0.21
Rnft1-201ENSMUST00000020827 Eif4g3Q80XI3 1579 aaKnown RBP13.7□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Lrrc9Q8CDN9 1456 aa13.69□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Ppp4r2Q0VGB7 417 aa13.69□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Inpp5dQ9ES52 1191 aa13.68□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Cd109Q8R422 1442 aa13.68□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Zranb1Q7M760 708 aa13.68□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Fgd6Q69ZL1 1399 aa13.68□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Mlh3A0A1Y7VMP7 1443 aa13.68□□□□□ -0.22
Rnft1-201ENSMUST00000020827 PtprtQ99M80 1454 aa13.68□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Rad21Q61550 635 aaKnown RBP13.68□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Abcc1O35379 1528 aa13.68□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Gm14025A2AP89 1413 aa13.67□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Gm13695A2AK44 830 aa13.67□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Liat1Q810M6 228 aa13.67□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Iqgap1Q9JKF1 1657 aaKnown RBP13.67□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Pde4cQ3UEI1 686 aa13.66□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Kidins220E9Q9B7 1793 aa13.66□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Pelp1Q9DBD5 1123 aaKnown RBP13.66□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Fmn2Q9JL04 1578 aa13.65□□□□□ -0.22
Rnft1-201ENSMUST00000020827 PtprgQ05909 1442 aa13.65□□□□□ -0.22
Rnft1-201ENSMUST00000020827 Atp10dQ8K2X1 1416 aa13.65□□□□□ -0.22
Rnft1-201ENSMUST00000020827 CenpbP27790 599 aa13.64□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Pank3Q8R2W9 370 aa13.64□□□□□ -0.23
Rnft1-201ENSMUST00000020827 RalgapbQ8BQZ4 1484 aa13.64□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Tubgcp6G5E8P0 1769 aa13.64□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Edc4Q3UJB9 1406 aaKnown RBP13.63□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Xrn1P97789 1719 aaKnown RBP13.63□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Spag9Q58A65 1321 aaKnown RBP13.62□□□□□ -0.23
Rnft1-201ENSMUST00000020827 NhsB1AV60 1647 aa13.62□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Ofd1Q80Z25 1017 aa13.62□□□□□ -0.23
Rnft1-201ENSMUST00000020827 ShprhQ7TPQ3 1674 aa13.62□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Plekhg5Q66T02 1073 aa13.61□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Pdcd11Q6NS46 1862 aaKnown RBP13.61□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Ythdc2B2RR83 1445 aaKnown RBP13.61□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Esx1O88933 382 aa13.6□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Ak9G3UYQ4 1894 aa13.6□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Gas2l2Q5SSG4 860 aa13.6□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Stk24Q99KH8 431 aa13.6□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Golgb1E9PVZ8 3238 aa13.6□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Usp54Q8BL06 1588 aaKnown RBP13.59□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Kif3bQ61771 747 aa13.59□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Egfem1Q8C088 590 aa13.59□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Supt16hQ920B9 1047 aa13.59□□□□□ -0.23
Rnft1-201ENSMUST00000020827 PrxO55103 1391 aa13.59□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Cnga1P29974 684 aa13.59□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Zfp444Q3TDV8 331 aaKnown RBP13.59□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Caskin1Q6P9K8 1431 aa13.59□□□□□ -0.23
Rnft1-201ENSMUST00000020827 Rrbp1Q99PL5 1605 aaKnown RBP13.58□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Col17a1Q07563 1470 aa13.58□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Tulp4Q9JIL5 1547 aa13.58□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Ttbk1Q6PCN3 1308 aa13.57□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Tnnt3Q9QZ47 272 aa13.56□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Kdm5cP41230 1554 aa13.56□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Rnf17Q99MV7 1640 aa13.56□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Slc4a1apE9PX68 744 aa13.56□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Mroh3A0A1D5RM54 893 aa13.55□□□□□ -0.24
Rnft1-201ENSMUST00000020827 NrdcQ8BHG1 1161 aa13.55□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Polr3aB2RXC6 1390 aa13.55□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Abcc3B2RX12 1523 aa13.55□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Abca9Q8K449 1623 aa13.55□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Abca8bQ8K440 1620 aa13.54□□□□□ -0.24
Rnft1-201ENSMUST00000020827 CrbnQ8C7D2 445 aa13.54□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Robo2Q7TPD3 1470 aa13.54□□□□□ -0.24
Rnft1-201ENSMUST00000020827 AI481877A2ALV5 1481 aa13.53□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Cpsf1Q9EPU4 1441 aaKnown RBP13.53□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Fan1Q69ZT1 1020 aa13.53□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Adgrl2Q8JZZ7 1487 aa13.53□□□□□ -0.24
Rnft1-201ENSMUST00000020827 Apbb1Q9QXJ1 710 aa13.52□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Ptch1Q61115 1434 aa13.51□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Abca6Q8K441 1624 aa13.5□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Zfyve16Q80U44 1528 aa13.49□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Dnajc5gQ8C632 165 aa13.49□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Tcerg1Q8CGF7 1100 aaKnown RBP13.49□□□□□ -0.25
Rnft1-201ENSMUST00000020827 P2rx7Q9Z1M0 595 aa13.49□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Cep170Q6A065 1588 aa13.48□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Cwc22Q8C5N3 908 aaKnown RBP13.48□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Rock2P70336 1388 aa13.47□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Wdr43Q6ZQL4 677 aaKnown RBP13.47□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Kif1bQ60575 1816 aaKnown RBP13.47□□□□□ -0.25
Rnft1-201ENSMUST00000020827 AU022751B1B0V2 589 aa13.47□□□□□ -0.25
Rnft1-201ENSMUST00000020827 Myo5cE9Q1F5 1742 aa13.46□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Zscan10Q3URR7 782 aa13.45□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Myo3aQ8K3H5 1613 aa13.45□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Fndc1E9Q043 1732 aa13.45□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Mast1Q9R1L5 1570 aa13.45□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Rock1P70335 1354 aa13.44□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Stra8P70278 393 aa13.44□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Senp3Q9EP97 568 aaKnown RBP13.44□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Abcc6Q9R1S7 1498 aa13.43□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Anp32aO35381 247 aa13.43□□□□□ -0.26
Rnft1-201ENSMUST00000020827 Gapvd1Q6PAR5 1458 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms