RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W NOT5Q12514 560 aaPredicted RBP3.09□□□□□ -1.91
SSU72YNL222W SWI1P09547 1314 aa3.09□□□□□ -1.91
SSU72YNL222W STE3P06783 470 aa3.08□□□□□ -1.92
SSU72YNL222W STE7P06784 515 aa3.08□□□□□ -1.92
SSU72YNL222W PUT4P15380 627 aa3.08□□□□□ -1.92
SSU72YNL222W VMA2P16140 517 aaKnown RBP3.08□□□□□ -1.92
SSU72YNL222W CKA2P19454 339 aa3.08□□□□□ -1.92
SSU72YNL222W CHA1P25379 360 aaKnown RBP3.08□□□□□ -1.92
SSU72YNL222W BMH1P29311 267 aaKnown RBP3.08□□□□□ -1.92
SSU72YNL222W CSE1P33307 960 aa3.08□□□□□ -1.92
SSU72YNL222W DTR1P38125 572 aa3.08□□□□□ -1.92
SSU72YNL222W YML6P51998 286 aa3.08□□□□□ -1.92
SSU72YNL222W MIG2P53035 382 aa3.08□□□□□ -1.92
SSU72YNL222W PRP38Q00723 242 aaPredicted RBP3.08□□□□□ -1.92
SSU72YNL222W RPL21AQ02753 160 aaKnown RBP3.08□□□□□ -1.92
SSU72YNL222W YPL107WQ02873 248 aa3.08□□□□□ -1.92
SSU72YNL222W RRN5Q02983 363 aa3.08□□□□□ -1.92
SSU72YNL222W VPS60Q03390 229 aa3.08□□□□□ -1.92
SSU72YNL222W RRP17Q04031 235 aaPredicted RBP3.08□□□□□ -1.92
SSU72YNL222W KRE28Q04431 385 aa3.08□□□□□ -1.92
SSU72YNL222W MSC3Q05812 728 aa3.08□□□□□ -1.92
SSU72YNL222W PRM7Q12459 698 aa3.08□□□□□ -1.92
SSU72YNL222W RPL21BQ12672 160 aaKnown RBP3.08□□□□□ -1.92
SSU72YNL222W LSO2Q3E772 92 aaKnown RBP3.08□□□□□ -1.92
SSU72YNL222W RPS3P05750 240 aaKnown RBP3.07□□□□□ -1.92
SSU72YNL222W RPS18AP0CX55 146 aaKnown RBP3.07□□□□□ -1.92
SSU72YNL222W RPS18BP0CX56 146 aaPredicted RBP3.07□□□□□ -1.92
SSU72YNL222W VPH2P32341 215 aa3.07□□□□□ -1.92
SSU72YNL222W UBC6P33296 250 aaPredicted RBP3.07□□□□□ -1.92
SSU72YNL222W VPS51P36116 164 aa3.07□□□□□ -1.92
SSU72YNL222W BMT2P38278 337 aa3.07□□□□□ -1.92
SSU72YNL222W LSM12P38828 187 aaKnown RBP3.07□□□□□ -1.92
SSU72YNL222W CHL4P38907 458 aa3.07□□□□□ -1.92
SSU72YNL222W JEM1P40358 645 aa3.07□□□□□ -1.92
SSU72YNL222W SNX4P47057 423 aa3.07□□□□□ -1.92
SSU72YNL222W APS3P47064 194 aa3.07□□□□□ -1.92
SSU72YNL222W VAC7P53950 1165 aa3.07□□□□□ -1.92
SSU72YNL222W YDR541CQ03049 344 aa3.07□□□□□ -1.92
SSU72YNL222W UBX2Q04228 584 aa3.07□□□□□ -1.92
SSU72YNL222W GYL1Q04322 720 aa3.07□□□□□ -1.92
SSU72YNL222W YDR115WQ04598 105 aa3.07□□□□□ -1.92
SSU72YNL222W NOP6Q07623 225 aaKnown RBP3.07□□□□□ -1.92
SSU72YNL222W LDS2Q08218 356 aa3.07□□□□□ -1.92
SSU72YNL222W ABP140Q08641 628 aaKnown RBP3.07□□□□□ -1.92
SSU72YNL222W YOR376WQ08900 122 aa3.07□□□□□ -1.92
SSU72YNL222W MEX67Q99257 599 aaKnown RBP3.07□□□□□ -1.92
SSU72YNL222W STF1P01098 86 aa3.06□□□□□ -1.92
SSU72YNL222W OM45P16547 393 aa3.06□□□□□ -1.92
SSU72YNL222W TRX1P22217 103 aaKnown RBP3.06□□□□□ -1.92
SSU72YNL222W SPA2P23201 1466 aaKnown RBP3.06□□□□□ -1.92
SSU72YNL222W PDC2P32896 925 aa3.06□□□□□ -1.92
SSU72YNL222W SRP72P38688 640 aaKnown RBP3.06□□□□□ -1.92
SSU72YNL222W SIP3P38717 1229 aa3.06□□□□□ -1.92
SSU72YNL222W EPL1P43572 832 aa3.06□□□□□ -1.92
SSU72YNL222W SEH1P53011 349 aaKnown RBP3.06□□□□□ -1.92
SSU72YNL222W DIB1Q06819 143 aaPredicted RBP3.06□□□□□ -1.92
SSU72YNL222W TIR4Q12218 487 aaPredicted RBP3.06□□□□□ -1.92
SSU72YNL222W MED4Q12343 284 aa3.06□□□□□ -1.92
SSU72YNL222W HMS1Q12398 434 aa3.06□□□□□ -1.92
SSU72YNL222W SRN2Q99176 213 aa3.06□□□□□ -1.92
SSU72YNL222W STH1P32597 1359 aa3.05□□□□□ -1.92
SSU72YNL222W HIS3P06633 220 aa3.05□□□□□ -1.92
SSU72YNL222W SEC14P24280 304 aaKnown RBP3.05□□□□□ -1.92
SSU72YNL222W RDS1P25611 832 aa3.05□□□□□ -1.92
SSU72YNL222W MEI4P29467 408 aa3.05□□□□□ -1.92
SSU72YNL222W DOA4P32571 926 aa3.05□□□□□ -1.92
SSU72YNL222W SMF2P38778 549 aa3.05□□□□□ -1.92
SSU72YNL222W RTC3P38804 111 aaPredicted RBP3.05□□□□□ -1.92
SSU72YNL222W MNL1P38888 796 aa3.05□□□□□ -1.92
SSU72YNL222W PEX22P39718 180 aa3.05□□□□□ -1.92
SSU72YNL222W EDC3P39998 551 aaKnown RBP3.05□□□□□ -1.92
SSU72YNL222W YER137CP40083 148 aaKnown RBP3.05□□□□□ -1.92
SSU72YNL222W GCN20P43535 752 aaKnown RBP3.05□□□□□ -1.92
SSU72YNL222W CIN2P46670 268 aa3.05□□□□□ -1.92
SSU72YNL222W VMA10P48836 114 aaKnown RBP3.05□□□□□ -1.92
SSU72YNL222W LSG1P53145 640 aaKnown RBP3.05□□□□□ -1.92
SSU72YNL222W MPS2P53159 387 aa3.05□□□□□ -1.92
SSU72YNL222W RPN14P53196 417 aa3.05□□□□□ -1.92
SSU72YNL222W RTT102P53330 157 aa3.05□□□□□ -1.92
SSU72YNL222W YLR177WQ06251 628 aa3.05□□□□□ -1.92
SSU72YNL222W SPE3Q12074 293 aaKnown RBP3.05□□□□□ -1.92
SSU72YNL222W CDC37P06101 506 aaKnown RBP3.04□□□□□ -1.92
SSU72YNL222W MRPL8P22353 238 aa3.04□□□□□ -1.92
SSU72YNL222W CDC10P25342 322 aaKnown RBP3.04□□□□□ -1.92
SSU72YNL222W MGM101P32787 269 aaKnown RBP3.04□□□□□ -1.92
SSU72YNL222W WSS1P38838 269 aa3.04□□□□□ -1.92
SSU72YNL222W VPS45P38932 577 aa3.04□□□□□ -1.92
SSU72YNL222W RIO2P40160 425 aaKnown RBP3.04□□□□□ -1.92
SSU72YNL222W AGE2P40529 298 aa3.04□□□□□ -1.92
SSU72YNL222W PFS2P42841 465 aaKnown RBP3.04□□□□□ -1.92
SSU72YNL222W FYV8P46949 817 aaKnown RBP3.04□□□□□ -1.92
SSU72YNL222W CTK3P46963 296 aaPredicted RBP3.04□□□□□ -1.92
SSU72YNL222W ALB1P47019 175 aaPredicted RBP3.04□□□□□ -1.92
SSU72YNL222W CIK1Q01649 594 aa3.04□□□□□ -1.92
SSU72YNL222W YMR010WQ03687 405 aa3.04□□□□□ -1.92
SSU72YNL222W YML108WQ03759 105 aa3.04□□□□□ -1.92
SSU72YNL222W INP2Q03824 705 aa3.04□□□□□ -1.92
SSU72YNL222W PLP1Q04004 230 aa3.04□□□□□ -1.92
SSU72YNL222W GMC2Q06201 188 aa3.04□□□□□ -1.92
SSU72YNL222W LAG2Q92325 660 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 112 ms