RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W ROM2P51862 1356 aaKnown RBP2.2□□□□□ -2.06
CSI1YMR025W ARO3P14843 370 aaKnown RBP2.19□□□□□ -2.06
CSI1YMR025W CHA1P25379 360 aaKnown RBP2.19□□□□□ -2.06
CSI1YMR025W ANP1P32629 500 aa2.19□□□□□ -2.06
CSI1YMR025W TIR2P33890 251 aa2.19□□□□□ -2.06
CSI1YMR025W YBR241CP38142 488 aa2.19□□□□□ -2.06
CSI1YMR025W ZTA1P38230 334 aaKnown RBP2.19□□□□□ -2.06
CSI1YMR025W INM1P38710 295 aa2.19□□□□□ -2.06
CSI1YMR025W SER3P40054 469 aa2.19□□□□□ -2.06
CSI1YMR025W ZIM17P42844 174 aa2.19□□□□□ -2.06
CSI1YMR025W TCB2P48231 1178 aa2.19□□□□□ -2.06
CSI1YMR025W TOS2P50078 622 aa2.19□□□□□ -2.06
CSI1YMR025W RSC1P53236 928 aa2.19□□□□□ -2.06
CSI1YMR025W ISA2Q12425 185 aa2.19□□□□□ -2.06
CSI1YMR025W ADE6P38972 1358 aaKnown RBP2.19□□□□□ -2.06
CSI1YMR025W RSF2P46974 1380 aa2.19□□□□□ -2.06
CSI1YMR025W RPS24AP0CX31 135 aaKnown RBP2.18□□□□□ -2.06
CSI1YMR025W RPS24BP0CX32 135 aaKnown RBP2.18□□□□□ -2.06
CSI1YMR025W DBP7P36120 742 aaKnown RBP2.18□□□□□ -2.06
CSI1YMR025W SRP72P38688 640 aaKnown RBP2.18□□□□□ -2.06
CSI1YMR025W GEP4P38812 185 aa2.18□□□□□ -2.06
CSI1YMR025W STN1P38960 494 aa2.18□□□□□ -2.06
CSI1YMR025W YIL059CP40520 121 aa2.18□□□□□ -2.06
CSI1YMR025W STE24P47154 453 aa2.18□□□□□ -2.06
CSI1YMR025W RNH201P53942 307 aa2.18□□□□□ -2.06
CSI1YMR025W RMI1Q02685 241 aa2.18□□□□□ -2.06
CSI1YMR025W AEP3Q12089 606 aa2.18□□□□□ -2.06
CSI1YMR025W YOP1Q12402 180 aa2.18□□□□□ -2.06
CSI1YMR025W SMC6Q12749 1114 aa2.18□□□□□ -2.06
CSI1YMR025W GCN2P15442 1659 aa2.18□□□□□ -2.06
CSI1YMR025W HSP104P31539 908 aaKnown RBP2.17□□□□□ -2.06
CSI1YMR025W RIM1P32445 135 aaKnown RBP2.17□□□□□ -2.06
CSI1YMR025W BIO3P50277 480 aa2.17□□□□□ -2.06
CSI1YMR025W RRN9P53437 365 aa2.17□□□□□ -2.06
CSI1YMR025W ASA1Q06822 443 aa2.17□□□□□ -2.06
CSI1YMR025W HIF1Q12373 385 aa2.17□□□□□ -2.06
CSI1YMR025W SCH9P11792 824 aaKnown RBP2.16□□□□□ -2.06
CSI1YMR025W SPS19P32573 292 aaKnown RBP2.16□□□□□ -2.06
CSI1YMR025W UTR5P32630 166 aa2.16□□□□□ -2.06
CSI1YMR025W PXA2P34230 853 aa2.16□□□□□ -2.06
CSI1YMR025W FAD1P38913 306 aa2.16□□□□□ -2.06
CSI1YMR025W CIN2P46670 268 aa2.16□□□□□ -2.06
CSI1YMR025W ASN2P49090 572 aaKnown RBP2.16□□□□□ -2.06
CSI1YMR025W PIB2P53191 635 aa2.16□□□□□ -2.06
CSI1YMR025W YAL067W-AQ8TGK6 75 aa2.16□□□□□ -2.06
CSI1YMR025W TPK3P05986 398 aa2.15□□□□□ -2.07
CSI1YMR025W MDH1P17505 334 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
CSI1YMR025W CPR2P23285 205 aa2.15□□□□□ -2.07
CSI1YMR025W SLM5P25345 492 aaKnown RBP2.15□□□□□ -2.07
CSI1YMR025W SKG6P32900 734 aaPredicted RBP2.15□□□□□ -2.07
CSI1YMR025W SHE3P38272 425 aaKnown RBP2.15□□□□□ -2.07
CSI1YMR025W ATM1P40416 690 aa2.15□□□□□ -2.07
CSI1YMR025W EAF6P47128 113 aa2.15□□□□□ -2.07
CSI1YMR025W MRX11Q03079 207 aa2.15□□□□□ -2.07
CSI1YMR025W GYL1Q04322 720 aa2.15□□□□□ -2.07
CSI1YMR025W FSH2Q05015 223 aa2.15□□□□□ -2.07
CSI1YMR025W ECM7Q06200 448 aa2.15□□□□□ -2.07
CSI1YMR025W MEX67Q99257 599 aaKnown RBP2.15□□□□□ -2.07
CSI1YMR025W UNG1P12887 359 aa2.14□□□□□ -2.07
CSI1YMR025W OSM1P21375 501 aaKnown RBP2.14□□□□□ -2.07
CSI1YMR025W ABM1P47146 123 aa2.14□□□□□ -2.07
CSI1YMR025W YML6P51998 286 aa2.14□□□□□ -2.07
CSI1YMR025W YDR341CQ05506 607 aaKnown RBP2.14□□□□□ -2.07
CSI1YMR025W YLR456WQ06199 204 aa2.14□□□□□ -2.07
CSI1YMR025W GPM3Q12326 303 aa2.14□□□□□ -2.07
CSI1YMR025W RNH203Q12338 110 aa2.14□□□□□ -2.07
CSI1YMR025W NUP192P47054 1683 aa2.14□□□□□ -2.07
CSI1YMR025W RRP5Q05022 1729 aaKnown RBP2.14□□□□□ -2.07
CSI1YMR025W RPO41P13433 1351 aaKnown RBP2.13□□□□□ -2.07
CSI1YMR025W OPI3P05375 206 aa2.13□□□□□ -2.07
CSI1YMR025W LDS1P31379 325 aa2.13□□□□□ -2.07
CSI1YMR025W NRP1P32770 719 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
CSI1YMR025W LCB2P40970 561 aa2.13□□□□□ -2.07
CSI1YMR025W CTK3P46963 296 aaPredicted RBP2.13□□□□□ -2.07
CSI1YMR025W CIK1Q01649 594 aa2.13□□□□□ -2.07
CSI1YMR025W ATP16Q12165 160 aa2.13□□□□□ -2.07
CSI1YMR025W VPS13Q07878 3144 aa2.13□□□□□ -2.07
CSI1YMR025W YLR419WQ06698 1435 aaKnown RBP2.12□□□□□ -2.07
CSI1YMR025W CKA2P19454 339 aa2.12□□□□□ -2.07
CSI1YMR025W PHO91P27514 894 aa2.12□□□□□ -2.07
CSI1YMR025W PPQ1P32945 549 aa2.12□□□□□ -2.07
CSI1YMR025W DOA1P36037 715 aa2.12□□□□□ -2.07
CSI1YMR025W SHE1P38200 338 aa2.12□□□□□ -2.07
CSI1YMR025W QDR3P38227 689 aa2.12□□□□□ -2.07
CSI1YMR025W EFM4P40516 257 aa2.12□□□□□ -2.07
CSI1YMR025W ROG1P53118 685 aa2.12□□□□□ -2.07
CSI1YMR025W YGR015CP53208 328 aa2.12□□□□□ -2.07
CSI1YMR025W YGR111WP53265 400 aa2.12□□□□□ -2.07
CSI1YMR025W PRP3Q03338 469 aaPredicted RBP2.12□□□□□ -2.07
CSI1YMR025W NSE1Q07913 336 aa2.12□□□□□ -2.07
CSI1YMR025W FLO11P08640 1367 aa2.11□□□□□ -2.07
CSI1YMR025W PDE2P06776 526 aa2.11□□□□□ -2.07
CSI1YMR025W RPL12AP0CX53 165 aaKnown RBP2.11□□□□□ -2.07
CSI1YMR025W RPL12BP0CX54 165 aa2.11□□□□□ -2.07
CSI1YMR025W ARF1P11076 181 aaKnown RBP2.11□□□□□ -2.07
CSI1YMR025W MNE1P24720 663 aa2.11□□□□□ -2.07
CSI1YMR025W SDH4P37298 181 aa2.11□□□□□ -2.07
CSI1YMR025W LRP1P38801 184 aaKnown RBP2.11□□□□□ -2.07
CSI1YMR025W SHC1P39000 512 aa2.11□□□□□ -2.07
CSI1YMR025W PAC11P40960 533 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms