RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W NDE2Q07500 545 aa2.83□□□□□ -1.96
YLR400WYLR400W YDL114WQ07530 308 aa2.83□□□□□ -1.96
YLR400WYLR400W LOT6Q07923 191 aa2.83□□□□□ -1.96
YLR400WYLR400W SMC5Q08204 1093 aa2.83□□□□□ -1.96
YLR400WYLR400W SIA1Q12212 622 aa2.83□□□□□ -1.96
YLR400WYLR400W YGK3Q12222 375 aaPredicted RBP2.83□□□□□ -1.96
YLR400WYLR400W ERV2Q12284 196 aa2.83□□□□□ -1.96
YLR400WYLR400W RPN6Q12377 434 aa2.83□□□□□ -1.96
YLR400WYLR400W PRP46Q12417 451 aaPredicted RBP2.83□□□□□ -1.96
YLR400WYLR400W YPR1Q12458 312 aa2.83□□□□□ -1.96
YLR400WYLR400W PIS1P06197 220 aaKnown RBP2.82□□□□□ -1.96
YLR400WYLR400W DAL2P25335 343 aa2.82□□□□□ -1.96
YLR400WYLR400W SPR1P32603 445 aa2.82□□□□□ -1.96
YLR400WYLR400W COT1P32798 439 aa2.82□□□□□ -1.96
YLR400WYLR400W SPT8P38915 602 aa2.82□□□□□ -1.96
YLR400WYLR400W PTI1P39927 425 aaPredicted RBP2.82□□□□□ -1.96
YLR400WYLR400W YIL029CP40538 142 aa2.82□□□□□ -1.96
YLR400WYLR400W YJR030CP47101 745 aa2.82□□□□□ -1.96
YLR400WYLR400W AIM24P47127 394 aa2.82□□□□□ -1.96
YLR400WYLR400W EMC2P47133 292 aaKnown RBP2.82□□□□□ -1.96
YLR400WYLR400W YGL242CP53066 181 aa2.82□□□□□ -1.96
YLR400WYLR400W MPP6P53725 186 aaPredicted RBP2.82□□□□□ -1.96
YLR400WYLR400W ATC1Q04005 294 aa2.82□□□□□ -1.96
YLR400WYLR400W PRM6Q04705 352 aa2.82□□□□□ -1.96
YLR400WYLR400W FCY22Q12119 530 aa2.82□□□□□ -1.96
YLR400WYLR400W TY3A-GQ12173 290 aa2.82□□□□□ -1.96
YLR400WYLR400W EAF3Q12432 401 aa2.82□□□□□ -1.96
YLR400WYLR400W TY3A-IQ99219 290 aa2.82□□□□□ -1.96
YLR400WYLR400W UBA3Q99344 299 aa2.82□□□□□ -1.96
YLR400WYLR400W ANR2P36090 516 aaPredicted RBP2.81□□□□□ -1.96
YLR400WYLR400W RFS1P38234 210 aaKnown RBP2.81□□□□□ -1.96
YLR400WYLR400W HSM3P38348 480 aa2.81□□□□□ -1.96
YLR400WYLR400W RCK2P38623 610 aa2.81□□□□□ -1.96
YLR400WYLR400W YFL067WP43537 175 aa2.81□□□□□ -1.96
YLR400WYLR400W WWM1P43582 211 aaKnown RBP2.81□□□□□ -1.96
YLR400WYLR400W YAR1P46683 200 aa2.81□□□□□ -1.96
YLR400WYLR400W COX16P47081 118 aa2.81□□□□□ -1.96
YLR400WYLR400W MST27P53176 234 aa2.81□□□□□ -1.96
YLR400WYLR400W ADD37Q03233 198 aa2.81□□□□□ -1.96
YLR400WYLR400W TRM82Q03774 444 aa2.81□□□□□ -1.96
YLR400WYLR400W YPR091CQ06833 770 aa2.81□□□□□ -1.96
YLR400WYLR400W TSR1Q07381 788 aaKnown RBP2.81□□□□□ -1.96
YLR400WYLR400W MFG1Q07684 458 aa2.81□□□□□ -1.96
YLR400WYLR400W SAM4Q08985 325 aaKnown RBP2.81□□□□□ -1.96
YLR400WYLR400W FRE8Q12209 686 aa2.81□□□□□ -1.96
YLR400WYLR400W MCT1Q12283 360 aa2.81□□□□□ -1.96
YLR400WYLR400W YDL199CQ12407 687 aa2.81□□□□□ -1.96
YLR400WYLR400W PCL9Q12477 304 aa2.81□□□□□ -1.96
YLR400WYLR400W ATP6P00854 259 aa2.8□□□□□ -1.96
YLR400WYLR400W MSI1P13712 422 aa2.8□□□□□ -1.96
YLR400WYLR400W RSR1P13856 272 aa2.8□□□□□ -1.96
YLR400WYLR400W POL30P15873 258 aaKnown RBP2.8□□□□□ -1.96
YLR400WYLR400W RBK1P25332 333 aa2.8□□□□□ -1.96
YLR400WYLR400W CSM1P25651 190 aa2.8□□□□□ -1.96
YLR400WYLR400W SDH3P33421 198 aa2.8□□□□□ -1.96
YLR400WYLR400W HIS2P38635 335 aa2.8□□□□□ -1.96
YLR400WYLR400W CTM1P38818 585 aa2.8□□□□□ -1.96
YLR400WYLR400W HEM14P40012 539 aa2.8□□□□□ -1.96
YLR400WYLR400W REE1P40893 198 aa2.8□□□□□ -1.96
YLR400WYLR400W YPI1P43587 155 aa2.8□□□□□ -1.96
YLR400WYLR400W BNS1P50084 137 aa2.8□□□□□ -1.96
YLR400WYLR400W LSB1P53281 241 aa2.8□□□□□ -1.96
YLR400WYLR400W CWC25P53854 179 aaKnown RBP2.8□□□□□ -1.96
YLR400WYLR400W YPL080CQ02826 108 aa2.8□□□□□ -1.96
YLR400WYLR400W YMR027WQ04371 470 aa2.8□□□□□ -1.96
YLR400WYLR400W RRN11Q04712 507 aa2.8□□□□□ -1.96
YLR400WYLR400W RTN1Q04947 295 aaKnown RBP2.8□□□□□ -1.96
YLR400WYLR400W YHC1Q05900 231 aaKnown RBP2.8□□□□□ -1.96
YLR400WYLR400W BOP2Q06150 570 aa2.8□□□□□ -1.96
YLR400WYLR400W YLR173WQ06247 608 aa2.8□□□□□ -1.96
YLR400WYLR400W YLR012CQ07927 99 aa2.8□□□□□ -1.96
YLR400WYLR400W FDH1Q08911 376 aa2.8□□□□□ -1.96
YLR400WYLR400W APC9Q12107 265 aa2.8□□□□□ -1.96
YLR400WYLR400W TMS1Q12116 473 aa2.8□□□□□ -1.96
YLR400WYLR400W TDH3P00359 332 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
YLR400WYLR400W COX2P00410 251 aa2.79□□□□□ -1.96
YLR400WYLR400W REP1P03871 373 aa2.79□□□□□ -1.96
YLR400WYLR400W HEM4P06174 275 aa2.79□□□□□ -1.96
YLR400WYLR400W RAD7P06779 565 aa2.79□□□□□ -1.96
YLR400WYLR400W MSF1P08425 469 aa2.79□□□□□ -1.96
YLR400WYLR400W RPL23AP0CX41 137 aaKnown RBP2.79□□□□□ -1.96
YLR400WYLR400W RPL23BP0CX42 137 aaKnown RBP2.79□□□□□ -1.96
YLR400WYLR400W RPS18AP0CX55 146 aaKnown RBP2.79□□□□□ -1.96
YLR400WYLR400W RPS18BP0CX56 146 aaPredicted RBP2.79□□□□□ -1.96
YLR400WYLR400W HPR1P17629 752 aaKnown RBP2.79□□□□□ -1.96
YLR400WYLR400W RPB5P20434 215 aa2.79□□□□□ -1.96
YLR400WYLR400W RPL16AP26784 199 aaKnown RBP2.79□□□□□ -1.96
YLR400WYLR400W POP5P28005 173 aa2.79□□□□□ -1.96
YLR400WYLR400W GCG1P32656 232 aaKnown RBP2.79□□□□□ -1.96
YLR400WYLR400W COS9P36034 407 aa2.79□□□□□ -1.96
YLR400WYLR400W ECM8P38246 354 aa2.79□□□□□ -1.96
YLR400WYLR400W YMR262WP38430 313 aa2.79□□□□□ -1.96
YLR400WYLR400W YHR035WP38769 630 aa2.79□□□□□ -1.96
YLR400WYLR400W PRM9P39551 298 aa2.79□□□□□ -1.96
YLR400WYLR400W MAM33P40513 266 aa2.79□□□□□ -1.96
YLR400WYLR400W PMT4P46971 762 aa2.79□□□□□ -1.96
YLR400WYLR400W SEH1P53011 349 aaKnown RBP2.79□□□□□ -1.96
YLR400WYLR400W MTQ1P53944 314 aa2.79□□□□□ -1.96
YLR400WYLR400W SUR7P54003 302 aa2.79□□□□□ -1.96
YLR400WYLR400W SPP2Q02521 185 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms