RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W FUM1P08417 488 aaKnown RBP4.71□□□□□ -1.66
CDC4YFL009W MET2P08465 486 aa4.71□□□□□ -1.66
CDC4YFL009W SIR1P21691 654 aa4.71□□□□□ -1.66
CDC4YFL009W MNE1P24720 663 aa4.71□□□□□ -1.66
CDC4YFL009W IFM1P25038 676 aa4.71□□□□□ -1.66
CDC4YFL009W BEM1P29366 551 aa4.71□□□□□ -1.66
CDC4YFL009W FAA1P30624 700 aaKnown RBP4.71□□□□□ -1.66
CDC4YFL009W ELF1P36053 145 aa4.71□□□□□ -1.66
CDC4YFL009W CAK1P43568 368 aaPredicted RBP4.71□□□□□ -1.66
CDC4YFL009W GAT1P43574 510 aa4.71□□□□□ -1.66
CDC4YFL009W CCC1P47818 322 aa4.71□□□□□ -1.66
CDC4YFL009W NRD1P53617 575 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
CDC4YFL009W PML1Q07930 204 aaPredicted RBP4.71□□□□□ -1.66
CDC4YFL009W ESC8Q08119 714 aa4.71□□□□□ -1.66
CDC4YFL009W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
CDC4YFL009W JLP1Q12358 412 aa4.71□□□□□ -1.66
CDC4YFL009W AAC1P04710 309 aa4.7□□□□□ -1.66
CDC4YFL009W ASP3-2P0CX77 362 aa4.7□□□□□ -1.66
CDC4YFL009W ASP3-3P0CX78 362 aa4.7□□□□□ -1.66
CDC4YFL009W ASP3-4P0CX79 362 aa4.7□□□□□ -1.66
CDC4YFL009W ASP3-1P0CZ17 362 aa4.7□□□□□ -1.66
CDC4YFL009W RNA15P25299 296 aaPredicted RBP4.7□□□□□ -1.66
CDC4YFL009W BUB3P26449 341 aa4.7□□□□□ -1.66
CDC4YFL009W COX13P32799 129 aa4.7□□□□□ -1.66
CDC4YFL009W LHP1P33399 275 aaKnown RBP4.7□□□□□ -1.66
CDC4YFL009W ECT1P33412 323 aa4.7□□□□□ -1.66
CDC4YFL009W WBP1P33767 430 aaKnown RBP4.7□□□□□ -1.66
CDC4YFL009W MAL32P38158 584 aa4.7□□□□□ -1.66
CDC4YFL009W YHR033WP38690 423 aa4.7□□□□□ -1.66
CDC4YFL009W NVJ1P38881 321 aa4.7□□□□□ -1.66
CDC4YFL009W SPO73P40031 143 aa4.7□□□□□ -1.66
CDC4YFL009W LSM5P40089 93 aaKnown RBP4.7□□□□□ -1.66
CDC4YFL009W CHA4P43634 648 aa4.7□□□□□ -1.66
CDC4YFL009W PUS4P48567 403 aaKnown RBP4.7□□□□□ -1.66
CDC4YFL009W MAL12P53341 584 aa4.7□□□□□ -1.66
CDC4YFL009W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
CDC4YFL009W YFT2Q06676 274 aa4.7□□□□□ -1.66
CDC4YFL009W THP1Q08231 455 aa4.7□□□□□ -1.66
CDC4YFL009W SFM1Q12314 213 aa4.7□□□□□ -1.66
CDC4YFL009W EFG1Q3E705 233 aaKnown RBP4.7□□□□□ -1.66
CDC4YFL009W VMA9Q3E7B6 73 aa4.7□□□□□ -1.66
CDC4YFL009W GAL80P04387 435 aa4.69□□□□□ -1.66
CDC4YFL009W PMA1P05030 918 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W HEM2P05373 342 aa4.69□□□□□ -1.66
CDC4YFL009W CHS1P08004 1131 aa4.69□□□□□ -1.66
CDC4YFL009W SAM1P10659 382 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W RPL4AP10664 362 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W MAG1P22134 296 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W SHP1P34223 423 aa4.69□□□□□ -1.66
CDC4YFL009W DHR2P36009 735 aaPredicted RBP4.69□□□□□ -1.66
CDC4YFL009W TCM62P38228 572 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W MMS4P38257 691 aa4.69□□□□□ -1.66
CDC4YFL009W VID24P38263 362 aa4.69□□□□□ -1.66
CDC4YFL009W BMT2P38278 337 aa4.69□□□□□ -1.66
CDC4YFL009W KSP1P38691 1029 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W YIL108WP40483 696 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W RPL4BP49626 362 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W FOL2P51601 243 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W ROG1P53118 685 aa4.69□□□□□ -1.66
CDC4YFL009W MPC1P53157 130 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W RRN9P53437 365 aa4.69□□□□□ -1.66
CDC4YFL009W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
CDC4YFL009W MFG1Q07684 458 aa4.69□□□□□ -1.66
CDC4YFL009W THI72Q08579 599 aa4.69□□□□□ -1.66
CDC4YFL009W GPB1Q08886 897 aa4.69□□□□□ -1.66
CDC4YFL009W DDC1Q08949 612 aa4.69□□□□□ -1.66
CDC4YFL009W ATP4P05626 244 aa4.69□□□□□ -1.66
CDC4YFL009W MAS2P11914 482 aa4.69□□□□□ -1.66
CDC4YFL009W YPK2P18961 677 aa4.69□□□□□ -1.66
CDC4YFL009W DCC1P25559 380 aa4.69□□□□□ -1.66
CDC4YFL009W YCR102CP25608 368 aa4.69□□□□□ -1.66
CDC4YFL009W CYS3P31373 394 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W EMP24P32803 203 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W SSS1P35179 80 aa4.69□□□□□ -1.66
CDC4YFL009W CHK1P38147 527 aa4.69□□□□□ -1.66
CDC4YFL009W POP8P38208 133 aa4.69□□□□□ -1.66
CDC4YFL009W NPR2P39923 615 aa4.69□□□□□ -1.66
CDC4YFL009W AFG3P39925 761 aa4.69□□□□□ -1.66
CDC4YFL009W GPP2P40106 250 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W SLZ1P40167 298 aa4.69□□□□□ -1.66
CDC4YFL009W YIL166CP40445 542 aa4.69□□□□□ -1.66
CDC4YFL009W IRC24P40580 263 aa4.69□□□□□ -1.66
CDC4YFL009W BAP3P41815 604 aa4.69□□□□□ -1.66
CDC4YFL009W SKP2P42843 763 aa4.69□□□□□ -1.66
CDC4YFL009W PRM10P42946 383 aa4.69□□□□□ -1.66
CDC4YFL009W NIT2P47016 307 aa4.69□□□□□ -1.66
CDC4YFL009W LOH1P47055 219 aa4.69□□□□□ -1.66
CDC4YFL009W SEH1P53011 349 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W HCH1P53834 153 aa4.69□□□□□ -1.66
CDC4YFL009W IBD2P53892 351 aa4.69□□□□□ -1.66
CDC4YFL009W BOP2Q06150 570 aa4.69□□□□□ -1.66
CDC4YFL009W TMA10Q06177 86 aa4.69□□□□□ -1.66
CDC4YFL009W TPO3Q06451 622 aa4.69□□□□□ -1.66
CDC4YFL009W REX3Q12090 404 aa4.69□□□□□ -1.66
CDC4YFL009W LPX1Q12405 387 aaKnown RBP4.69□□□□□ -1.66
CDC4YFL009W SCEIP03882 235 aa4.68□□□□□ -1.66
CDC4YFL009W RPS18AP0CX55 146 aaKnown RBP4.68□□□□□ -1.66
CDC4YFL009W RPS18BP0CX56 146 aaPredicted RBP4.68□□□□□ -1.66
CDC4YFL009W MRP1P10662 321 aaKnown RBP4.68□□□□□ -1.66
CDC4YFL009W GAC1P28006 793 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms