RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W MOB2P43563 287 aa1.76□□□□□ -2.13
VPS52YDR484W YHC3P47040 408 aa1.76□□□□□ -2.13
VPS52YDR484W ATP22P50273 684 aaPredicted RBP1.76□□□□□ -2.13
VPS52YDR484W RMI1Q02685 241 aa1.76□□□□□ -2.13
VPS52YDR484W MRX11Q03079 207 aa1.76□□□□□ -2.13
VPS52YDR484W TRM82Q03774 444 aa1.76□□□□□ -2.13
VPS52YDR484W DBP9Q06218 594 aaKnown RBP1.76□□□□□ -2.13
VPS52YDR484W MRPS5P33759 307 aa1.75□□□□□ -2.13
VPS52YDR484W DTR1P38125 572 aa1.75□□□□□ -2.13
VPS52YDR484W SMP1P38128 452 aa1.75□□□□□ -2.13
VPS52YDR484W APE4P38821 490 aa1.75□□□□□ -2.13
VPS52YDR484W YHR122WP38829 231 aa1.75□□□□□ -2.13
VPS52YDR484W EFM3P47163 339 aa1.75□□□□□ -2.13
VPS52YDR484W YGR067CP53243 804 aa1.75□□□□□ -2.13
VPS52YDR484W YNL143CP53908 130 aa1.75□□□□□ -2.13
VPS52YDR484W AQR1P53943 586 aa1.75□□□□□ -2.13
VPS52YDR484W YOR376WQ08900 122 aa1.75□□□□□ -2.13
VPS52YDR484W FRE8Q12209 686 aa1.75□□□□□ -2.13
VPS52YDR484W STE2D6VTK4 431 aa1.74□□□□□ -2.13
VPS52YDR484W MXR2P25566 168 aa1.74□□□□□ -2.13
VPS52YDR484W URA10P30402 227 aa1.74□□□□□ -2.13
VPS52YDR484W ZIP1P31111 875 aa1.74□□□□□ -2.13
VPS52YDR484W SWI3P32591 825 aa1.74□□□□□ -2.13
VPS52YDR484W PTK1P36002 662 aaPredicted RBP1.74□□□□□ -2.13
VPS52YDR484W YKL071WP36086 256 aa1.74□□□□□ -2.13
VPS52YDR484W PCH2P38126 564 aa1.74□□□□□ -2.13
VPS52YDR484W IST2P38250 946 aa1.74□□□□□ -2.13
VPS52YDR484W RCK2P38623 610 aa1.74□□□□□ -2.13
VPS52YDR484W ATG7P38862 630 aa1.74□□□□□ -2.13
VPS52YDR484W YMR134WP40207 237 aa1.74□□□□□ -2.13
VPS52YDR484W COQ5P49017 307 aa1.74□□□□□ -2.13
VPS52YDR484W PRM1P53835 661 aa1.74□□□□□ -2.13
VPS52YDR484W APJ1P53940 528 aa1.74□□□□□ -2.13
VPS52YDR484W SUR7P54003 302 aa1.74□□□□□ -2.13
VPS52YDR484W RRB1Q04225 511 aaKnown RBP1.74□□□□□ -2.13
VPS52YDR484W NAT4Q04751 285 aa1.74□□□□□ -2.13
VPS52YDR484W ARR1Q06596 294 aa1.74□□□□□ -2.13
VPS52YDR484W ALE1Q08548 619 aa1.74□□□□□ -2.13
VPS52YDR484W DDC1Q08949 612 aa1.74□□□□□ -2.13
VPS52YDR484W SLM3Q12093 417 aa1.74□□□□□ -2.13
VPS52YDR484W NFI1Q12216 726 aa1.74□□□□□ -2.13
VPS52YDR484W TIR4Q12218 487 aaPredicted RBP1.74□□□□□ -2.13
VPS52YDR484W MKK1P32490 508 aa1.74□□□□□ -2.13
VPS52YDR484W VPH1P32563 840 aaKnown RBP1.74□□□□□ -2.13
VPS52YDR484W EFM1P38732 585 aa1.74□□□□□ -2.13
VPS52YDR484W RRT13P40042 185 aa1.74□□□□□ -2.13
VPS52YDR484W CSM3Q04659 317 aa1.74□□□□□ -2.13
VPS52YDR484W YOR012WQ12351 137 aa1.74□□□□□ -2.13
VPS52YDR484W RPS14AP06367 137 aaKnown RBP1.73□□□□□ -2.13
VPS52YDR484W STE3P06783 470 aa1.73□□□□□ -2.13
VPS52YDR484W YLL053CP0CD98 152 aa1.73□□□□□ -2.13
VPS52YDR484W TAL1P15019 335 aaKnown RBP1.73□□□□□ -2.13
VPS52YDR484W BGL2P15703 313 aaKnown RBP1.73□□□□□ -2.13
VPS52YDR484W SAG1P20840 650 aa1.73□□□□□ -2.13
VPS52YDR484W POT1P27796 417 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
VPS52YDR484W ERG9P29704 444 aa1.73□□□□□ -2.13
VPS52YDR484W RAD23P32628 398 aaKnown RBP1.73□□□□□ -2.13
VPS52YDR484W SIF2P38262 535 aa1.73□□□□□ -2.13
VPS52YDR484W GGC1P38988 300 aa1.73□□□□□ -2.13
VPS52YDR484W RPS14BP39516 138 aaKnown RBP1.73□□□□□ -2.13
VPS52YDR484W CUE3P53137 624 aaKnown RBP1.73□□□□□ -2.13
VPS52YDR484W SED5Q01590 340 aa1.73□□□□□ -2.13
VPS52YDR484W RGS2Q99188 309 aa1.73□□□□□ -2.13
VPS52YDR484W HXT2P23585 541 aa1.72□□□□□ -2.13
VPS52YDR484W FMT1P32785 401 aa1.72□□□□□ -2.13
VPS52YDR484W PEX32P38292 413 aa1.72□□□□□ -2.13
VPS52YDR484W YIL089WP40500 205 aa1.72□□□□□ -2.13
VPS52YDR484W LSG1P53145 640 aaKnown RBP1.72□□□□□ -2.13
VPS52YDR484W API2Q04413 109 aa1.72□□□□□ -2.13
VPS52YDR484W RPN8Q08723 338 aaKnown RBP1.72□□□□□ -2.13
VPS52YDR484W MMT2Q08970 484 aa1.72□□□□□ -2.13
VPS52YDR484W YOL085CQ99345 113 aa1.72□□□□□ -2.13
VPS52YDR484W SPT7P35177 1332 aa1.72□□□□□ -2.13
VPS52YDR484W UTR1P21373 530 aa1.72□□□□□ -2.13
VPS52YDR484W HST1P53685 503 aa1.72□□□□□ -2.13
VPS52YDR484W YNL146WP53906 100 aa1.72□□□□□ -2.13
VPS52YDR484W MRX8Q05473 314 aa1.72□□□□□ -2.13
VPS52YDR484W RAD1P06777 1100 aa1.71□□□□□ -2.14
VPS52YDR484W CKA2P19454 339 aa1.71□□□□□ -2.14
VPS52YDR484W DCC1P25559 380 aa1.71□□□□□ -2.14
VPS52YDR484W CIN8P27895 1000 aa1.71□□□□□ -2.14
VPS52YDR484W YEL043WP32618 956 aa1.71□□□□□ -2.14
VPS52YDR484W TIP20P33891 701 aa1.71□□□□□ -2.14
VPS52YDR484W IML3P38265 245 aa1.71□□□□□ -2.14
VPS52YDR484W ALP1P38971 573 aa1.71□□□□□ -2.14
VPS52YDR484W FHL1P39521 936 aa1.71□□□□□ -2.14
VPS52YDR484W PRP39P39682 629 aaKnown RBP1.71□□□□□ -2.14
VPS52YDR484W FRT2P39734 528 aa1.71□□□□□ -2.14
VPS52YDR484W YIR035CP40579 254 aa1.71□□□□□ -2.14
VPS52YDR484W NRM1P53718 249 aa1.71□□□□□ -2.14
VPS52YDR484W HCH1P53834 153 aa1.71□□□□□ -2.14
VPS52YDR484W YOL029CQ08187 201 aa1.71□□□□□ -2.14
VPS52YDR484W YAL067W-AQ8TGK6 75 aa1.71□□□□□ -2.14
VPS52YDR484W AUS1Q08409 1394 aa1.71□□□□□ -2.14
VPS52YDR484W TPS2P31688 896 aaKnown RBP1.7□□□□□ -2.14
VPS52YDR484W UIP5P36137 443 aa1.7□□□□□ -2.14
VPS52YDR484W MMS21P38632 267 aa1.7□□□□□ -2.14
VPS52YDR484W UFE1P41834 346 aa1.7□□□□□ -2.14
VPS52YDR484W PFS2P42841 465 aaKnown RBP1.7□□□□□ -2.14
VPS52YDR484W YCH1P42937 148 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms