RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W SIP2P34164 415 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W RCY1P39531 840 aa2.12□□□□□ -2.07
VPS16YPL045W PCL6P40038 420 aa2.12□□□□□ -2.07
VPS16YPL045W FMP33P46998 180 aa2.12□□□□□ -2.07
VPS16YPL045W YGR117CP53270 476 aa2.12□□□□□ -2.07
VPS16YPL045W YGR168CP53293 376 aa2.12□□□□□ -2.07
VPS16YPL045W YNL134CP53912 376 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W YNL050CP53952 270 aa2.12□□□□□ -2.07
VPS16YPL045W SPR6Q01684 191 aa2.12□□□□□ -2.07
VPS16YPL045W BOP2Q06150 570 aa2.12□□□□□ -2.07
VPS16YPL045W YOL107WQ12239 342 aa2.12□□□□□ -2.07
VPS16YPL045W TPT1Q12272 230 aaKnown RBP2.12□□□□□ -2.07
VPS16YPL045W RAD1P06777 1100 aa2.11□□□□□ -2.07
VPS16YPL045W CDC42P19073 191 aa2.11□□□□□ -2.07
VPS16YPL045W FAR1P21268 830 aa2.11□□□□□ -2.07
VPS16YPL045W SPS22P25380 463 aa2.11□□□□□ -2.07
VPS16YPL045W VMA5P31412 392 aaKnown RBP2.11□□□□□ -2.07
VPS16YPL045W GLC7P32598 312 aaKnown RBP2.11□□□□□ -2.07
VPS16YPL045W MNS1P32906 549 aa2.11□□□□□ -2.07
VPS16YPL045W YKL162CP36052 402 aa2.11□□□□□ -2.07
VPS16YPL045W IML3P38265 245 aa2.11□□□□□ -2.07
VPS16YPL045W PEX32P38292 413 aa2.11□□□□□ -2.07
VPS16YPL045W DED81P38707 554 aaKnown RBP2.11□□□□□ -2.07
VPS16YPL045W ATG7P38862 630 aa2.11□□□□□ -2.07
VPS16YPL045W RRT5P43607 289 aa2.11□□□□□ -2.07
VPS16YPL045W ABM1P47146 123 aa2.11□□□□□ -2.07
VPS16YPL045W NAS6P50086 228 aa2.11□□□□□ -2.07
VPS16YPL045W AVT4P50944 713 aa2.11□□□□□ -2.07
VPS16YPL045W BET4Q00618 327 aa2.11□□□□□ -2.07
VPS16YPL045W YMR254CQ04838 102 aa2.11□□□□□ -2.07
VPS16YPL045W YAP7Q08182 245 aa2.11□□□□□ -2.07
VPS16YPL045W YIL177CP40434 1758 aa2.11□□□□□ -2.07
VPS16YPL045W YJL225CP40889 1758 aa2.11□□□□□ -2.07
VPS16YPL045W FKS3Q04952 1785 aa2.11□□□□□ -2.07
VPS16YPL045W RPL24AP04449 155 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W ARF2P19146 181 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W MRPL8P22353 238 aa2.1□□□□□ -2.07
VPS16YPL045W GPI12P23797 304 aa2.1□□□□□ -2.07
VPS16YPL045W DAL2P25335 343 aa2.1□□□□□ -2.07
VPS16YPL045W ILV6P25605 309 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W ICL1P28240 557 aaPredicted RBP2.1□□□□□ -2.07
VPS16YPL045W YKT6P36015 200 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W MCR1P36060 302 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W GPX2P38143 162 aa2.1□□□□□ -2.07
VPS16YPL045W YMR262WP38430 313 aa2.1□□□□□ -2.07
VPS16YPL045W SBE22P38814 852 aa2.1□□□□□ -2.07
VPS16YPL045W CCT4P39078 528 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W FAA2P39518 744 aa2.1□□□□□ -2.07
VPS16YPL045W MST28P39552 234 aa2.1□□□□□ -2.07
VPS16YPL045W HAT2P39984 401 aa2.1□□□□□ -2.07
VPS16YPL045W DSE1P40077 573 aa2.1□□□□□ -2.07
VPS16YPL045W GCN20P43535 752 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W TIM21P53220 239 aa2.1□□□□□ -2.07
VPS16YPL045W ERG13P54839 491 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W YMR102CQ03177 834 aa2.1□□□□□ -2.07
VPS16YPL045W RRN11Q04712 507 aa2.1□□□□□ -2.07
VPS16YPL045W BCP1Q06338 283 aa2.1□□□□□ -2.07
VPS16YPL045W YPR1Q12458 312 aa2.1□□□□□ -2.07
VPS16YPL045W KRE5P22023 1365 aa2.1□□□□□ -2.07
VPS16YPL045W MSF1P08425 469 aa2.1□□□□□ -2.07
VPS16YPL045W TUB1P09733 447 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W SSC1P0CS90 654 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W AIM17P23180 465 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W CSM1P25651 190 aa2.1□□□□□ -2.07
VPS16YPL045W YEF1P32622 495 aa2.1□□□□□ -2.07
VPS16YPL045W IMP3P32899 183 aaPredicted RBP2.1□□□□□ -2.07
VPS16YPL045W MSN4P33749 630 aa2.1□□□□□ -2.07
VPS16YPL045W TAE1P38340 232 aa2.1□□□□□ -2.07
VPS16YPL045W SEC9P40357 651 aa2.1□□□□□ -2.07
VPS16YPL045W INA22P40576 216 aa2.1□□□□□ -2.07
VPS16YPL045W IRC24P40580 263 aa2.1□□□□□ -2.07
VPS16YPL045W AZF1P41696 914 aa2.1□□□□□ -2.07
VPS16YPL045W LST7P53237 242 aa2.1□□□□□ -2.07
VPS16YPL045W MNT4P53745 580 aa2.1□□□□□ -2.07
VPS16YPL045W COS1P53822 381 aa2.1□□□□□ -2.07
VPS16YPL045W RVB1Q03940 463 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W YDR415CQ04033 374 aaPredicted RBP2.1□□□□□ -2.07
VPS16YPL045W MED4Q12343 284 aa2.1□□□□□ -2.07
VPS16YPL045W URB1P34241 1764 aaKnown RBP2.1□□□□□ -2.07
VPS16YPL045W PGK1P00560 416 aaKnown RBP2.09□□□□□ -2.07
VPS16YPL045W PAB1P04147 577 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
VPS16YPL045W CAP2P13517 287 aa2.09□□□□□ -2.07
VPS16YPL045W POL30P15873 258 aaKnown RBP2.09□□□□□ -2.07
VPS16YPL045W MDM10P18409 493 aa2.09□□□□□ -2.07
VPS16YPL045W SAM2P19358 384 aaKnown RBP2.09□□□□□ -2.07
VPS16YPL045W RPB4P20433 221 aaPredicted RBP2.09□□□□□ -2.07
VPS16YPL045W EXG1P23776 448 aaKnown RBP2.09□□□□□ -2.07
VPS16YPL045W RPL5P26321 297 aaKnown RBP2.09□□□□□ -2.07
VPS16YPL045W DOA4P32571 926 aa2.09□□□□□ -2.07
VPS16YPL045W IST2P38250 946 aa2.09□□□□□ -2.07
VPS16YPL045W RRP3P38712 501 aaKnown RBP2.09□□□□□ -2.07
VPS16YPL045W YHR045WP38775 560 aa2.09□□□□□ -2.07
VPS16YPL045W SSN8P47821 323 aa2.09□□□□□ -2.07
VPS16YPL045W AZR1P50080 613 aa2.09□□□□□ -2.07
VPS16YPL045W TAF6P53040 516 aa2.09□□□□□ -2.07
VPS16YPL045W POP6P53218 158 aa2.09□□□□□ -2.07
VPS16YPL045W SRL4Q03085 281 aa2.09□□□□□ -2.07
VPS16YPL045W CCE1Q03702 353 aa2.09□□□□□ -2.07
VPS16YPL045W SHS1Q07657 551 aa2.09□□□□□ -2.07
VPS16YPL045W GAT3Q07928 141 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms