RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C SDC1Q03323 175 aa9.16□□□□□ -0.94
YSR3YKR053C RSN1Q03516 953 aa9.16□□□□□ -0.94
YSR3YKR053C BRX1Q08235 291 aaKnown RBP9.16□□□□□ -0.94
YSR3YKR053C ENB1Q08299 606 aa9.16□□□□□ -0.94
YSR3YKR053C BAG7Q12128 409 aa9.16□□□□□ -0.94
YSR3YKR053C MRX4Q12467 430 aa9.16□□□□□ -0.94
YSR3YKR053C PFK27Q12471 397 aaPredicted RBP9.16□□□□□ -0.94
YSR3YKR053C TSC13Q99190 310 aa9.16□□□□□ -0.94
YSR3YKR053C EHD3P28817 500 aa9.15□□□□□ -0.94
YSR3YKR053C LHS1P36016 881 aa9.15□□□□□ -0.94
YSR3YKR053C NOP9P47077 666 aaKnown RBP9.15□□□□□ -0.94
YSR3YKR053C GPI8P49018 411 aa9.15□□□□□ -0.94
YSR3YKR053C HSV2P50079 448 aaPredicted RBP9.15□□□□□ -0.94
YSR3YKR053C DBP9Q06218 594 aaKnown RBP9.15□□□□□ -0.94
YSR3YKR053C YLR352WQ06479 807 aa9.15□□□□□ -0.94
YSR3YKR053C NOP12Q08208 459 aaKnown RBP9.15□□□□□ -0.94
YSR3YKR053C MCP1Q12106 302 aa9.15□□□□□ -0.94
YSR3YKR053C YOL163WP0CF20 169 aa9.14□□□□□ -0.95
YSR3YKR053C NFS1P25374 497 aa9.14□□□□□ -0.95
YSR3YKR053C APD1P38281 316 aa9.14□□□□□ -0.95
YSR3YKR053C MTC4P38335 694 aaKnown RBP9.14□□□□□ -0.95
YSR3YKR053C RBG1P39729 369 aa9.14□□□□□ -0.95
YSR3YKR053C YNL208WP40159 199 aaKnown RBP9.14□□□□□ -0.95
YSR3YKR053C YIL169CP40442 995 aa9.14□□□□□ -0.95
YSR3YKR053C ALG12P53730 551 aa9.14□□□□□ -0.95
YSR3YKR053C NAN1Q02931 896 aaKnown RBP9.14□□□□□ -0.95
YSR3YKR053C RRN5Q02983 363 aa9.14□□□□□ -0.95
YSR3YKR053C YRA1Q12159 226 aaKnown RBP9.14□□□□□ -0.95
YSR3YKR053C SWM1Q12379 170 aa9.14□□□□□ -0.95
YSR3YKR053C RER1P25560 188 aa9.13□□□□□ -0.95
YSR3YKR053C HIR2P32480 875 aa9.13□□□□□ -0.95
YSR3YKR053C KRE6P32486 720 aa9.13□□□□□ -0.95
YSR3YKR053C YEF1P32622 495 aa9.13□□□□□ -0.95
YSR3YKR053C YNL195CP40168 261 aa9.13□□□□□ -0.95
YSR3YKR053C XBP1P40489 647 aa9.13□□□□□ -0.95
YSR3YKR053C YGR066CP53242 292 aa9.13□□□□□ -0.95
YSR3YKR053C SPR6Q01684 191 aa9.13□□□□□ -0.95
YSR3YKR053C YMR102CQ03177 834 aa9.13□□□□□ -0.95
YSR3YKR053C SNX41Q04053 625 aa9.13□□□□□ -0.95
YSR3YKR053C RNH202Q05635 350 aa9.13□□□□□ -0.95
YSR3YKR053C HRI1Q05905 244 aaKnown RBP9.13□□□□□ -0.95
YSR3YKR053C AVO1Q08236 1176 aa9.13□□□□□ -0.95
YSR3YKR053C WTM2Q12206 467 aa9.13□□□□□ -0.95
YSR3YKR053C CBP6P07253 162 aaPredicted RBP9.12□□□□□ -0.95
YSR3YKR053C PDX1P16451 410 aa9.12□□□□□ -0.95
YSR3YKR053C RPN2P32565 945 aaKnown RBP9.12□□□□□ -0.95
YSR3YKR053C MGE1P38523 228 aa9.12□□□□□ -0.95
YSR3YKR053C RRP4P38792 359 aaKnown RBP9.12□□□□□ -0.95
YSR3YKR053C YHR219WP38900 624 aa9.12□□□□□ -0.95
YSR3YKR053C PRY1P47032 299 aa9.12□□□□□ -0.95
YSR3YKR053C IMD4P50094 524 aaKnown RBP9.12□□□□□ -0.95
YSR3YKR053C SYF2P53277 215 aaPredicted RBP9.12□□□□□ -0.95
YSR3YKR053C TPS1Q00764 495 aaKnown RBP9.12□□□□□ -0.95
YSR3YKR053C YPL039WQ03080 316 aa9.12□□□□□ -0.95
YSR3YKR053C VPS36Q06696 566 aa9.12□□□□□ -0.95
YSR3YKR053C YDL109CQ12103 647 aa9.12□□□□□ -0.95
YSR3YKR053C PET9P18239 318 aaKnown RBP9.11□□□□□ -0.95
YSR3YKR053C ERD2P18414 219 aa9.11□□□□□ -0.95
YSR3YKR053C SCO1P23833 295 aa9.11□□□□□ -0.95
YSR3YKR053C PTC6P25646 442 aa9.11□□□□□ -0.95
YSR3YKR053C ITR2P30606 609 aa9.11□□□□□ -0.95
YSR3YKR053C SAC1P32368 623 aaKnown RBP9.11□□□□□ -0.95
YSR3YKR053C DPH5P32469 300 aaPredicted RBP9.11□□□□□ -0.95
YSR3YKR053C GDH2P33327 1092 aaKnown RBP9.11□□□□□ -0.95
YSR3YKR053C HIS7P33734 552 aaKnown RBP9.11□□□□□ -0.95
YSR3YKR053C HCS1P34243 683 aa9.11□□□□□ -0.95
YSR3YKR053C YHR180WP38868 163 aa9.11□□□□□ -0.95
YSR3YKR053C YEL068CP39977 110 aa9.11□□□□□ -0.95
YSR3YKR053C HXT9P40885 567 aa9.11□□□□□ -0.95
YSR3YKR053C DIM1P41819 318 aaKnown RBP9.11□□□□□ -0.95
YSR3YKR053C HXT11P54862 567 aa9.11□□□□□ -0.95
YSR3YKR053C GRE1Q08969 168 aa9.11□□□□□ -0.95
YSR3YKR053C DFG16Q99234 619 aa9.11□□□□□ -0.95
YSR3YKR053C YOL087CQ99247 1116 aa9.11□□□□□ -0.95
YSR3YKR053C DET1Q99288 334 aaKnown RBP9.11□□□□□ -0.95
YSR3YKR053C CDC36P06100 191 aaPredicted RBP9.1□□□□□ -0.95
YSR3YKR053C AIM17P23180 465 aaKnown RBP9.1□□□□□ -0.95
YSR3YKR053C CLB4P24871 460 aa9.1□□□□□ -0.95
YSR3YKR053C IDH1P28834 360 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
YSR3YKR053C NTG1P31378 399 aa9.1□□□□□ -0.95
YSR3YKR053C PUP2P32379 260 aa9.1□□□□□ -0.95
YSR3YKR053C GSH1P32477 678 aa9.1□□□□□ -0.95
YSR3YKR053C PDX3P38075 228 aaKnown RBP9.1□□□□□ -0.95
YSR3YKR053C YMR262WP38430 313 aa9.1□□□□□ -0.95
YSR3YKR053C YHL012WP38709 493 aa9.1□□□□□ -0.95
YSR3YKR053C PEX18P38855 283 aa9.1□□□□□ -0.95
YSR3YKR053C SHO1P40073 367 aa9.1□□□□□ -0.95
YSR3YKR053C YFL066CP43538 392 aa9.1□□□□□ -0.95
YSR3YKR053C YJR142WP47173 342 aa9.1□□□□□ -0.95
YSR3YKR053C OGG1P53397 376 aaPredicted RBP9.1□□□□□ -0.95
YSR3YKR053C SOK2P53438 785 aaPredicted RBP9.1□□□□□ -0.95
YSR3YKR053C COX20Q04935 205 aa9.1□□□□□ -0.95
YSR3YKR053C HDA2Q06629 674 aa9.1□□□□□ -0.95
YSR3YKR053C CRT10Q08226 957 aa9.1□□□□□ -0.95
YSR3YKR053C TIM9O74700 87 aa9.09□□□□□ -0.95
YSR3YKR053C CAR2P07991 424 aaKnown RBP9.09□□□□□ -0.95
YSR3YKR053C CTA1P15202 515 aa9.09□□□□□ -0.95
YSR3YKR053C UTR1P21373 530 aa9.09□□□□□ -0.95
YSR3YKR053C ATG15P25641 520 aa9.09□□□□□ -0.95
YSR3YKR053C ASF2P32448 525 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms