RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W CKI1P20485 582 aa2.16□□□□□ -2.06
SNU114YKL173W ZIP1P31111 875 aa2.16□□□□□ -2.06
SNU114YKL173W MSK1P32048 576 aa2.16□□□□□ -2.06
SNU114YKL173W RAD23P32628 398 aaKnown RBP2.16□□□□□ -2.06
SNU114YKL173W PDR3P33200 976 aa2.16□□□□□ -2.06
SNU114YKL173W TAE1P38340 232 aa2.16□□□□□ -2.06
SNU114YKL173W PCL6P40038 420 aa2.16□□□□□ -2.06
SNU114YKL173W ATM1P40416 690 aa2.16□□□□□ -2.06
SNU114YKL173W TOS3P43637 560 aa2.16□□□□□ -2.06
SNU114YKL173W PHB2P50085 310 aa2.16□□□□□ -2.06
SNU114YKL173W MIG2P53035 382 aa2.16□□□□□ -2.06
SNU114YKL173W MND1P53102 219 aa2.16□□□□□ -2.06
SNU114YKL173W FRE4P53746 719 aa2.16□□□□□ -2.06
SNU114YKL173W AIM33Q04516 312 aa2.16□□□□□ -2.06
SNU114YKL173W SYO1Q07395 620 aa2.16□□□□□ -2.06
SNU114YKL173W GCN2P15442 1659 aa2.16□□□□□ -2.06
SNU114YKL173W GSC2P40989 1895 aa2.16□□□□□ -2.06
SNU114YKL173W SAL1D6W196 494 aa2.16□□□□□ -2.06
SNU114YKL173W PET494P07390 489 aaPredicted RBP2.16□□□□□ -2.06
SNU114YKL173W RPL42AP0CX27 106 aaKnown RBP2.16□□□□□ -2.06
SNU114YKL173W RPL42BP0CX28 106 aaKnown RBP2.16□□□□□ -2.06
SNU114YKL173W UTR1P21373 530 aa2.16□□□□□ -2.06
SNU114YKL173W APE2P32454 952 aaKnown RBP2.16□□□□□ -2.06
SNU114YKL173W UBC6P33296 250 aaPredicted RBP2.16□□□□□ -2.06
SNU114YKL173W SKN1P33336 771 aa2.16□□□□□ -2.06
SNU114YKL173W KAP104P38217 918 aaKnown RBP2.16□□□□□ -2.06
SNU114YKL173W IML3P38265 245 aa2.16□□□□□ -2.06
SNU114YKL173W PRP39P39682 629 aaKnown RBP2.16□□□□□ -2.06
SNU114YKL173W ISC1P40015 477 aaKnown RBP2.16□□□□□ -2.06
SNU114YKL173W CSM2P40465 213 aa2.16□□□□□ -2.06
SNU114YKL173W MEP2P41948 499 aa2.16□□□□□ -2.06
SNU114YKL173W BNA6P43619 295 aa2.16□□□□□ -2.06
SNU114YKL173W GLG2P47011 380 aa2.16□□□□□ -2.06
SNU114YKL173W YIP1P53039 248 aa2.16□□□□□ -2.06
SNU114YKL173W CGR1P53188 120 aa2.16□□□□□ -2.06
SNU114YKL173W SAM50P53969 484 aa2.16□□□□□ -2.06
SNU114YKL173W YMR102CQ03177 834 aa2.16□□□□□ -2.06
SNU114YKL173W ASA1Q06822 443 aa2.16□□□□□ -2.06
SNU114YKL173W GIS3Q12418 502 aa2.16□□□□□ -2.06
SNU114YKL173W YSP2Q06681 1438 aa2.16□□□□□ -2.06
SNU114YKL173W TEF1P02994 458 aaKnown RBP2.15□□□□□ -2.06
SNU114YKL173W RPB8P20436 146 aa2.15□□□□□ -2.06
SNU114YKL173W MXR2P25566 168 aa2.15□□□□□ -2.06
SNU114YKL173W YCR016WP25617 290 aaKnown RBP2.15□□□□□ -2.06
SNU114YKL173W ARO4P32449 370 aaKnown RBP2.15□□□□□ -2.06
SNU114YKL173W HXT1P32465 570 aa2.15□□□□□ -2.06
SNU114YKL173W COT1P32798 439 aa2.15□□□□□ -2.06
SNU114YKL173W YKL162CP36052 402 aa2.15□□□□□ -2.06
SNU114YKL173W MRPL37P36532 105 aa2.15□□□□□ -2.06
SNU114YKL173W FLO5P38894 1075 aa2.15□□□□□ -2.06
SNU114YKL173W PRM9P39551 298 aa2.15□□□□□ -2.06
SNU114YKL173W RTS2P40962 232 aa2.15□□□□□ -2.06
SNU114YKL173W YFL040WP43562 540 aa2.15□□□□□ -2.06
SNU114YKL173W YHC3P47040 408 aa2.15□□□□□ -2.06
SNU114YKL173W LOH1P47055 219 aa2.15□□□□□ -2.06
SNU114YKL173W BET4Q00618 327 aa2.15□□□□□ -2.06
SNU114YKL173W GIM5Q04493 163 aa2.15□□□□□ -2.06
SNU114YKL173W GMC2Q06201 188 aa2.15□□□□□ -2.06
SNU114YKL173W YLR173WQ06247 608 aa2.15□□□□□ -2.06
SNU114YKL173W PEX27Q08580 376 aa2.15□□□□□ -2.06
SNU114YKL173W RIO1Q12196 484 aaKnown RBP2.15□□□□□ -2.06
SNU114YKL173W FSH3Q99369 266 aa2.15□□□□□ -2.06
SNU114YKL173W RAD1P06777 1100 aa2.15□□□□□ -2.07
SNU114YKL173W DST1P07273 309 aa2.15□□□□□ -2.07
SNU114YKL173W RPL18AP0CX49 186 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W RPL18BP0CX50 186 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W SAM1P10659 382 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W YPK2P18961 677 aa2.15□□□□□ -2.07
SNU114YKL173W SUA5P32579 426 aa2.15□□□□□ -2.07
SNU114YKL173W ATG7P38862 630 aa2.15□□□□□ -2.07
SNU114YKL173W SLM1P40485 686 aa2.15□□□□□ -2.07
SNU114YKL173W SHQ1P40486 507 aaPredicted RBP2.15□□□□□ -2.07
SNU114YKL173W LDS2Q08218 356 aa2.15□□□□□ -2.07
SNU114YKL173W NDD1Q08887 554 aa2.15□□□□□ -2.07
SNU114YKL173W SRO7Q12038 1033 aa2.15□□□□□ -2.07
SNU114YKL173W YLL056CQ12177 298 aa2.15□□□□□ -2.07
SNU114YKL173W DCP1Q12517 231 aaPredicted RBP2.15□□□□□ -2.07
SNU114YKL173W SSA3P09435 649 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W RPL35AP0CX84 120 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W RPL35BP0CX85 120 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W CDC23P16522 626 aa2.15□□□□□ -2.07
SNU114YKL173W YCR043CP25361 127 aa2.15□□□□□ -2.07
SNU114YKL173W VAM7P32912 316 aa2.15□□□□□ -2.07
SNU114YKL173W LOS1P33418 1100 aaPredicted RBP2.15□□□□□ -2.07
SNU114YKL173W RRP1P35178 278 aaPredicted RBP2.15□□□□□ -2.07
SNU114YKL173W ECM15P35195 104 aa2.15□□□□□ -2.07
SNU114YKL173W FRE2P36033 711 aa2.15□□□□□ -2.07
SNU114YKL173W ERG10P41338 398 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W TES1P41903 349 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W SNZ3P43545 298 aa2.15□□□□□ -2.07
SNU114YKL173W MDV1P47025 714 aa2.15□□□□□ -2.07
SNU114YKL173W EMC2P47133 292 aaKnown RBP2.15□□□□□ -2.07
SNU114YKL173W HMS2P47175 358 aa2.15□□□□□ -2.07
SNU114YKL173W YPT11P48559 417 aa2.15□□□□□ -2.07
SNU114YKL173W RMR1P53060 241 aa2.15□□□□□ -2.07
SNU114YKL173W YGL114WP53134 725 aa2.15□□□□□ -2.07
SNU114YKL173W YNR048WP53740 393 aa2.15□□□□□ -2.07
SNU114YKL173W SNZ2P53824 298 aa2.15□□□□□ -2.07
SNU114YKL173W IRC4Q03036 179 aa2.15□□□□□ -2.07
SNU114YKL173W YMR310CQ04867 317 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms