RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT3	YIL038C	YKL018C-A	Q3E7A7	99 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	PBN1	P25580	416 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	SPB1	P25582	841 aa	Predicted RBP	4.92	□□□□□ -1.62
NOT3	YIL038C	MRPL9	P31334	269 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	AFG1	P32317	509 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	RTT105	P40063	208 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	AIM20	P40451	204 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	TIM13	P53299	105 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	GPI1	P53306	609 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	CRN1	Q06440	651 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	RAD34	Q06665	692 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	SGT1	Q08446	395 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	YLR122C	Q12312	125 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	MHF2	Q3E829	80 aa		4.92	□□□□□ -1.62
NOT3	YIL038C	MSF1	P08425	469 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
NOT3	YIL038C	MRPL17	P36528	281 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	CAK1	P43568	368 aa	Predicted RBP	4.91	□□□□□ -1.62
NOT3	YIL038C	IMD4	P50094	524 aa	Known RBP	4.91	□□□□□ -1.62
NOT3	YIL038C	VEL1	P53058	206 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	RMR1	P53060	241 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	ROT1	Q03691	256 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	YMR226C	Q05016	267 aa	Known RBP	4.91	□□□□□ -1.62
NOT3	YIL038C	TDA6	Q06466	467 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	LUC7	Q07508	261 aa	Predicted RBP	4.91	□□□□□ -1.62
NOT3	YIL038C	MCA1	Q08601	432 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	YBR255C-A	Q3E776	120 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	SEC63	P14906	663 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	CCA1	P21269	546 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	RPN2	P32565	945 aa	Known RBP	4.91	□□□□□ -1.62
NOT3	YIL038C	FAD1	P38913	306 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	TIM17	P39515	158 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	SNM1	P40993	198 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	SSU1	P41930	458 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	YJR030C	P47101	745 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	RAD17	P48581	401 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	RBL2	P48606	106 aa	Known RBP	4.91	□□□□□ -1.62
NOT3	YIL038C	GTF1	P53260	183 aa	Predicted RBP	4.91	□□□□□ -1.62
NOT3	YIL038C	ECM18	Q04623	453 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	YDL242W	Q07746	117 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	IRC13	Q08630	104 aa		4.91	□□□□□ -1.62
NOT3	YIL038C	TRP3	P00937	484 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	TFS1	P14306	219 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	STE4	P18851	423 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	DPH5	P32469	300 aa	Predicted RBP	4.9	□□□□□ -1.62
NOT3	YIL038C	CAT2	P32796	670 aa	Known RBP	4.9	□□□□□ -1.62
NOT3	YIL038C	GLG1	P36143	616 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	YBL029W	P38201	376 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	ECM10	P39987	644 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	COQ5	P49017	307 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	YGR079W	P53249	370 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	TLG1	Q03322	224 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	TRM82	Q03774	444 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	GAL83	Q04739	417 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	MDM30	Q05930	598 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	SWT1	Q12104	458 aa		4.9	□□□□□ -1.62
NOT3	YIL038C	VMA6	P32366	345 aa	Known RBP	4.9	□□□□□ -1.63
NOT3	YIL038C	SSE2	P32590	693 aa	Known RBP	4.9	□□□□□ -1.63
NOT3	YIL038C	CMC1	P36064	111 aa		4.9	□□□□□ -1.63
NOT3	YIL038C	PIM1	P36775	1133 aa		4.9	□□□□□ -1.63
NOT3	YIL038C	RCK1	P38622	512 aa		4.9	□□□□□ -1.63
NOT3	YIL038C	PCF11	P39081	626 aa	Predicted RBP	4.9	□□□□□ -1.63
NOT3	YIL038C	FMP32	P43557	207 aa		4.9	□□□□□ -1.63
NOT3	YIL038C	YJL043W	P47053	257 aa		4.9	□□□□□ -1.63
NOT3	YIL038C	TWF1	P53250	332 aa		4.9	□□□□□ -1.63
NOT3	YIL038C	RNY1	Q02933	434 aa	Known RBP	4.9	□□□□□ -1.63
NOT3	YIL038C	FMP42	Q04991	504 aa		4.9	□□□□□ -1.63
NOT3	YIL038C	GEP3	Q08622	556 aa		4.9	□□□□□ -1.63
NOT3	YIL038C	PFK27	Q12471	397 aa	Predicted RBP	4.9	□□□□□ -1.63
NOT3	YIL038C	ADE5,7	P07244	802 aa	Known RBP	4.89	□□□□□ -1.63
NOT3	YIL038C	LST4	P34239	828 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	MRPL36	P36531	177 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	BAT1	P38891	393 aa	Known RBP	4.89	□□□□□ -1.63
NOT3	YIL038C	ERV46	P39727	415 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	EMC2	P47133	292 aa	Known RBP	4.89	□□□□□ -1.63
NOT3	YIL038C	TIS11	P47977	285 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	YNL140C	P53910	189 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	RSM24	Q03976	319 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	RRP17	Q04031	235 aa	Predicted RBP	4.89	□□□□□ -1.63
NOT3	YIL038C	PST1	Q12355	444 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	WTM1	Q12363	437 aa	Known RBP	4.89	□□□□□ -1.63
NOT3	YIL038C	APC2	Q12440	853 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	RAD7	P06779	565 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	RPC40	P07703	335 aa	Known RBP	4.89	□□□□□ -1.63
NOT3	YIL038C	CHO1	P08456	276 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	OAR1	P35731	278 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	YFR020W	P43600	232 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	SDT1	P53078	280 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	TAF12	Q03761	539 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	PEX12	Q04370	399 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	EMI1	Q04406	187 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	FAR10	Q06001	478 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	YLR446W	Q06204	433 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	ULA1	Q12059	462 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	RPN6	Q12377	434 aa		4.89	□□□□□ -1.63
NOT3	YIL038C	TPK3	P05986	398 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	KIN2	P13186	1147 aa	Known RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	RPS1B	P23248	255 aa	Known RBP	4.88	□□□□□ -1.63
NOT3	YIL038C	ADE1	P27616	306 aa		4.88	□□□□□ -1.63
NOT3	YIL038C	CNE1	P27825	502 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms