RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W YER184CP39961 794 aa1.12□□□□□ -2.23
LCD1YDR499W LCP5P40079 357 aaPredicted RBP1.12□□□□□ -2.23
LCD1YDR499W SEC9P40357 651 aa1.12□□□□□ -2.23
LCD1YDR499W MSC3Q05812 728 aa1.12□□□□□ -2.23
LCD1YDR499W SHS1Q07657 551 aa1.12□□□□□ -2.23
LCD1YDR499W SFM1Q12314 213 aa1.12□□□□□ -2.23
LCD1YDR499W RAX2Q12465 1220 aa1.12□□□□□ -2.23
LCD1YDR499W AIM45Q12480 344 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W STE7P06784 515 aa1.12□□□□□ -2.23
LCD1YDR499W RPS16AP0CX51 143 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W RPS16BP0CX52 143 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W MAS2P11914 482 aa1.12□□□□□ -2.23
LCD1YDR499W CMK2P22517 447 aa1.12□□□□□ -2.23
LCD1YDR499W PHO84P25297 587 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W EFB1P32471 206 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W ANP1P32629 500 aa1.12□□□□□ -2.23
LCD1YDR499W SNL1P40548 159 aa1.12□□□□□ -2.23
LCD1YDR499W IGD1P43598 195 aa1.12□□□□□ -2.23
LCD1YDR499W VHT1P53241 593 aa1.12□□□□□ -2.23
LCD1YDR499W VAC7P53950 1165 aa1.12□□□□□ -2.23
LCD1YDR499W PRP38Q00723 242 aaPredicted RBP1.12□□□□□ -2.23
LCD1YDR499W TPS1Q00764 495 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W UTP6Q02354 440 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W YMR010WQ03687 405 aa1.12□□□□□ -2.23
LCD1YDR499W ENT5Q03769 411 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W PEX27Q08580 376 aa1.12□□□□□ -2.23
LCD1YDR499W HMS1Q12398 434 aa1.12□□□□□ -2.23
LCD1YDR499W DET1Q99288 334 aaKnown RBP1.12□□□□□ -2.23
LCD1YDR499W FAR1P21268 830 aa1.11□□□□□ -2.23
LCD1YDR499W GRR1P24814 1151 aa1.11□□□□□ -2.23
LCD1YDR499W RDS1P25611 832 aa1.11□□□□□ -2.23
LCD1YDR499W POT1P27796 417 aaKnown RBP RIP-Chip data1.11□□□□□ -2.23not detected
LCD1YDR499W SWI3P32591 825 aa1.11□□□□□ -2.23
LCD1YDR499W BLI1P35727 113 aa1.11□□□□□ -2.23
LCD1YDR499W PTK1P36002 662 aaPredicted RBP1.11□□□□□ -2.23
LCD1YDR499W YKR015CP36111 568 aa1.11□□□□□ -2.23
LCD1YDR499W LAS1P36146 502 aaPredicted RBP1.11□□□□□ -2.23
LCD1YDR499W MRPL27P36526 146 aaPredicted RBP1.11□□□□□ -2.23
LCD1YDR499W DTR1P38125 572 aa1.11□□□□□ -2.23
LCD1YDR499W YFL012WP43580 148 aa1.11□□□□□ -2.23
LCD1YDR499W EFM3P47163 339 aa1.11□□□□□ -2.23
LCD1YDR499W SEH1P53011 349 aaKnown RBP1.11□□□□□ -2.23
LCD1YDR499W MPS2P53159 387 aa1.11□□□□□ -2.23
LCD1YDR499W LST7P53237 242 aa1.11□□□□□ -2.23
LCD1YDR499W KTR6P54070 446 aa1.11□□□□□ -2.23
LCD1YDR499W AIM33Q04516 312 aa1.11□□□□□ -2.23
LCD1YDR499W YOR376WQ08900 122 aa1.11□□□□□ -2.23
LCD1YDR499W YDL109CQ12103 647 aa1.11□□□□□ -2.23
LCD1YDR499W HIF1Q12373 385 aa1.11□□□□□ -2.23
LCD1YDR499W FOL3Q12676 427 aaPredicted RBP1.11□□□□□ -2.23
LCD1YDR499W FSH3Q99369 266 aa1.11□□□□□ -2.23
LCD1YDR499W RPL23AP0CX41 137 aaKnown RBP1.11□□□□□ -2.23
LCD1YDR499W RPL23BP0CX42 137 aaKnown RBP1.11□□□□□ -2.23
LCD1YDR499W MAS1P10507 462 aa1.11□□□□□ -2.23
LCD1YDR499W MIR1P23641 311 aaKnown RBP1.11□□□□□ -2.23
LCD1YDR499W LDS1P31379 325 aa1.11□□□□□ -2.23
LCD1YDR499W PMT2P31382 759 aa1.11□□□□□ -2.23
LCD1YDR499W ZUO1P32527 433 aaKnown RBP1.11□□□□□ -2.23
LCD1YDR499W VPH1P32563 840 aaKnown RBP1.11□□□□□ -2.23
LCD1YDR499W TOA1P32773 286 aa1.11□□□□□ -2.23
LCD1YDR499W SOL2P37262 315 aa1.11□□□□□ -2.23
LCD1YDR499W RPA34P47006 233 aaPredicted RBP1.11□□□□□ -2.23
LCD1YDR499W CWC22P53333 577 aaKnown RBP1.11□□□□□ -2.23
LCD1YDR499W YNL143CP53908 130 aa1.11□□□□□ -2.23
LCD1YDR499W DBP9Q06218 594 aaKnown RBP1.11□□□□□ -2.23
LCD1YDR499W YLR177WQ06251 628 aa1.11□□□□□ -2.23
LCD1YDR499W ATP16Q12165 160 aa1.11□□□□□ -2.23
LCD1YDR499W NFI1Q12216 726 aa1.11□□□□□ -2.23
LCD1YDR499W YOR012WQ12351 137 aa1.11□□□□□ -2.23
LCD1YDR499W UNG1P12887 359 aa1.1□□□□□ -2.23
LCD1YDR499W THR4P16120 514 aaKnown RBP1.1□□□□□ -2.23
LCD1YDR499W ECT1P33412 323 aa1.1□□□□□ -2.23
LCD1YDR499W SIF2P38262 535 aa1.1□□□□□ -2.23
LCD1YDR499W YPT35P38815 214 aaKnown RBP1.1□□□□□ -2.23
LCD1YDR499W YHR122WP38829 231 aa1.1□□□□□ -2.23
LCD1YDR499W YHR182WP38870 785 aa1.1□□□□□ -2.23
LCD1YDR499W YJR030CP47101 745 aa1.1□□□□□ -2.23
LCD1YDR499W SMP3Q04174 516 aa1.1□□□□□ -2.23
LCD1YDR499W YMR310CQ04867 317 aaPredicted RBP1.1□□□□□ -2.23
LCD1YDR499W FSH2Q05015 223 aa1.1□□□□□ -2.23
LCD1YDR499W YOL075CQ08234 1294 aa1.1□□□□□ -2.23
LCD1YDR499W STE3P06783 470 aa1.09□□□□□ -2.23
LCD1YDR499W CKI1P20485 582 aa1.09□□□□□ -2.23
LCD1YDR499W SAG1P20840 650 aa1.09□□□□□ -2.23
LCD1YDR499W HMX1P32339 317 aa1.09□□□□□ -2.23
LCD1YDR499W PDC2P32896 925 aa1.09□□□□□ -2.23
LCD1YDR499W WSC4P38739 605 aa1.09□□□□□ -2.23
LCD1YDR499W ATG7P38862 630 aa1.09□□□□□ -2.23
LCD1YDR499W PEX22P39718 180 aa1.09□□□□□ -2.23
LCD1YDR499W AIM23P47015 356 aa1.09□□□□□ -2.23
LCD1YDR499W BIO3P50277 480 aa1.09□□□□□ -2.23
LCD1YDR499W RPL21AQ02753 160 aaKnown RBP1.09□□□□□ -2.23
LCD1YDR499W NAT4Q04751 285 aa1.09□□□□□ -2.23
LCD1YDR499W PML1Q07930 204 aaPredicted RBP1.09□□□□□ -2.23
LCD1YDR499W SLM3Q12093 417 aa1.09□□□□□ -2.23
LCD1YDR499W RPL21BQ12672 160 aaKnown RBP1.09□□□□□ -2.23
LCD1YDR499W NBL1Q3E7Y6 73 aa1.09□□□□□ -2.23
LCD1YDR499W TPI1P00942 248 aaKnown RBP1.09□□□□□ -2.24
LCD1YDR499W ARF2P19146 181 aaKnown RBP1.09□□□□□ -2.24
LCD1YDR499W UTR1P21373 530 aa1.09□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms