RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C YLR456WQ06199 204 aa1.81□□□□□ -2.12
ASM4YDL088C HEM4P06174 275 aa1.81□□□□□ -2.12
ASM4YDL088C UNG1P12887 359 aa1.81□□□□□ -2.12
ASM4YDL088C APE4P38821 490 aa1.81□□□□□ -2.12
ASM4YDL088C SPO73P40031 143 aa1.81□□□□□ -2.12
ASM4YDL088C YIL059CP40520 121 aa1.81□□□□□ -2.12
ASM4YDL088C ZIM17P42844 174 aa1.81□□□□□ -2.12
ASM4YDL088C ROG1P53118 685 aa1.81□□□□□ -2.12
ASM4YDL088C ZRG17P53735 605 aa1.81□□□□□ -2.12
ASM4YDL088C VPS9P54787 451 aa1.81□□□□□ -2.12
ASM4YDL088C INP2Q03824 705 aa1.81□□□□□ -2.12
ASM4YDL088C FAR10Q06001 478 aa1.81□□□□□ -2.12
ASM4YDL088C ATP16Q12165 160 aa1.81□□□□□ -2.12
ASM4YDL088C RPC53P25441 422 aa1.8□□□□□ -2.12
ASM4YDL088C VMA8P32610 256 aaKnown RBP1.8□□□□□ -2.12
ASM4YDL088C SKG6P32900 734 aaPredicted RBP1.8□□□□□ -2.12
ASM4YDL088C SHE3P38272 425 aaKnown RBP1.8□□□□□ -2.12
ASM4YDL088C SRP72P38688 640 aaKnown RBP1.8□□□□□ -2.12
ASM4YDL088C ABM1P47146 123 aa1.8□□□□□ -2.12
ASM4YDL088C PMT5P52867 743 aa1.8□□□□□ -2.12
ASM4YDL088C RSC1P53236 928 aa1.8□□□□□ -2.12
ASM4YDL088C HRT1Q08273 121 aa1.8□□□□□ -2.12
ASM4YDL088C YDL109CQ12103 647 aa1.8□□□□□ -2.12
ASM4YDL088C STE2D6VTK4 431 aa1.79□□□□□ -2.12
ASM4YDL088C CPR2P23285 205 aa1.79□□□□□ -2.12
ASM4YDL088C YSC83P32792 385 aa1.79□□□□□ -2.12
ASM4YDL088C PAC11P40960 533 aa1.79□□□□□ -2.12
ASM4YDL088C TCB2P48231 1178 aa1.79□□□□□ -2.12
ASM4YDL088C ASN2P49090 572 aaKnown RBP1.79□□□□□ -2.12
ASM4YDL088C CDH1P53197 566 aa1.79□□□□□ -2.12
ASM4YDL088C YGR015CP53208 328 aa1.79□□□□□ -2.12
ASM4YDL088C URC2Q04411 772 aa1.79□□□□□ -2.12
ASM4YDL088C GAS2Q06135 555 aa1.79□□□□□ -2.12
ASM4YDL088C LDS2Q08218 356 aa1.79□□□□□ -2.12
ASM4YDL088C YAL067W-AQ8TGK6 75 aa1.79□□□□□ -2.12
ASM4YDL088C FLO11P08640 1367 aa1.79□□□□□ -2.12
ASM4YDL088C SPT7P35177 1332 aa1.78□□□□□ -2.12
ASM4YDL088C PDX1P16451 410 aa1.78□□□□□ -2.12
ASM4YDL088C DBP7P36120 742 aaKnown RBP1.78□□□□□ -2.12
ASM4YDL088C LRP1P38801 184 aaKnown RBP1.78□□□□□ -2.12
ASM4YDL088C JEM1P40358 645 aa1.78□□□□□ -2.12
ASM4YDL088C CTK3P46963 296 aaPredicted RBP1.78□□□□□ -2.12
ASM4YDL088C YJL144WP47009 104 aa1.78□□□□□ -2.12
ASM4YDL088C YGR111WP53265 400 aa1.78□□□□□ -2.12
ASM4YDL088C SLT2Q00772 484 aa1.78□□□□□ -2.12
ASM4YDL088C CKA2P19454 339 aa1.77□□□□□ -2.13
ASM4YDL088C VPH1P32563 840 aaKnown RBP1.77□□□□□ -2.13
ASM4YDL088C FRM2P37261 193 aa1.77□□□□□ -2.13
ASM4YDL088C CIK1Q01649 594 aa1.77□□□□□ -2.13
ASM4YDL088C RMT2Q03305 412 aa1.77□□□□□ -2.13
ASM4YDL088C DCI1Q08558 271 aa1.77□□□□□ -2.13
ASM4YDL088C SMC6Q12749 1114 aa1.77□□□□□ -2.13
ASM4YDL088C RPL23AP0CX41 137 aaKnown RBP1.76□□□□□ -2.13
ASM4YDL088C RPL23BP0CX42 137 aaKnown RBP1.76□□□□□ -2.13
ASM4YDL088C TPM1P17536 199 aaKnown RBP1.76□□□□□ -2.13
ASM4YDL088C TOA2P32774 122 aa1.76□□□□□ -2.13
ASM4YDL088C SRB2P34162 210 aa1.76□□□□□ -2.13
ASM4YDL088C SHE1P38200 338 aa1.76□□□□□ -2.13
ASM4YDL088C YJR054WP47114 497 aa1.76□□□□□ -2.13
ASM4YDL088C YOL029CQ08187 201 aa1.76□□□□□ -2.13
ASM4YDL088C ISA2Q12425 185 aa1.76□□□□□ -2.13
ASM4YDL088C PUP2P32379 260 aa1.76□□□□□ -2.13
ASM4YDL088C RAD23P32628 398 aaKnown RBP1.76□□□□□ -2.13
ASM4YDL088C COS4P43542 379 aa1.76□□□□□ -2.13
ASM4YDL088C MEH1Q02205 184 aa1.76□□□□□ -2.13
ASM4YDL088C KRR1P25586 316 aaPredicted RBP1.75□□□□□ -2.13
ASM4YDL088C CBF5P33322 483 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
ASM4YDL088C CAJ1P39101 391 aa1.75□□□□□ -2.13
ASM4YDL088C BUD27P43573 796 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
ASM4YDL088C AIM23P47015 356 aa1.75□□□□□ -2.13
ASM4YDL088C YGR016WP53209 190 aa1.75□□□□□ -2.13
ASM4YDL088C RTT102P53330 157 aa1.75□□□□□ -2.13
ASM4YDL088C API2Q04413 109 aa1.75□□□□□ -2.13
ASM4YDL088C AAD15Q08361 143 aa1.75□□□□□ -2.13
ASM4YDL088C RNA1P11745 407 aaKnown RBP1.74□□□□□ -2.13
ASM4YDL088C MDH1P17505 334 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
ASM4YDL088C RXT2P38255 430 aa1.74□□□□□ -2.13
ASM4YDL088C GGC1P38988 300 aa1.74□□□□□ -2.13
ASM4YDL088C UFE1P41834 346 aa1.74□□□□□ -2.13
ASM4YDL088C SED5Q01590 340 aa1.74□□□□□ -2.13
ASM4YDL088C GAT3Q07928 141 aa1.74□□□□□ -2.13
ASM4YDL088C UAF30Q08747 228 aa1.74□□□□□ -2.13
ASM4YDL088C YOR338WQ99326 363 aa1.74□□□□□ -2.13
ASM4YDL088C VMA2P16140 517 aaKnown RBP1.73□□□□□ -2.13
ASM4YDL088C MRPL8P22353 238 aa1.73□□□□□ -2.13
ASM4YDL088C MIR1P23641 311 aaKnown RBP1.73□□□□□ -2.13
ASM4YDL088C UTR5P32630 166 aa1.73□□□□□ -2.13
ASM4YDL088C MDL1P33310 695 aa1.73□□□□□ -2.13
ASM4YDL088C KAP104P38217 918 aaKnown RBP1.73□□□□□ -2.13
ASM4YDL088C SEC28P40509 296 aaKnown RBP1.73□□□□□ -2.13
ASM4YDL088C YJL055WP47044 245 aa1.73□□□□□ -2.13
ASM4YDL088C YDR541CQ03049 344 aa1.73□□□□□ -2.13
ASM4YDL088C YDL211CQ12121 372 aa1.73□□□□□ -2.13
ASM4YDL088C PPQ1P32945 549 aa1.72□□□□□ -2.13
ASM4YDL088C LTV1P34078 463 aa1.72□□□□□ -2.13
ASM4YDL088C GDT1P38301 280 aaPredicted RBP1.72□□□□□ -2.13
ASM4YDL088C BDH1P39714 382 aa1.72□□□□□ -2.13
ASM4YDL088C PGC1Q08959 321 aa1.72□□□□□ -2.13
ASM4YDL088C SKS1Q12505 502 aa1.72□□□□□ -2.13
ASM4YDL088C RPS14AP06367 137 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms