RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	YMR254C	Q04838	102 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	RSF1	Q05043	376 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	YMR034C	Q05131	434 aa	Predicted RBP	3.17	□□□□□ -1.9
CMD1	YBR109C	YLR413W	Q06689	675 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	SSK1	Q07084	712 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	YDL114W	Q07530	308 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	COS7	Q07788	383 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	LDB18	Q07887	179 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	SGT1	Q08446	395 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	RKM1	Q08961	583 aa	Predicted RBP	3.17	□□□□□ -1.9
CMD1	YBR109C	VPS54	Q12071	889 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	CTF3	Q12748	733 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	MED11	Q99278	115 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	UBR2	Q07963	1872 aa		3.17	□□□□□ -1.9
CMD1	YBR109C	COR1	P07256	457 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	POX1	P13711	748 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	MSS116	P15424	664 aa	Known RBP	3.16	□□□□□ -1.9
CMD1	YBR109C	GLN3	P18494	730 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	CMK2	P22517	447 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	DBR1	P24309	405 aa	Known RBP	3.16	□□□□□ -1.9
CMD1	YBR109C	PRP21	P32524	280 aa	Predicted RBP	3.16	□□□□□ -1.9
CMD1	YBR109C	CSE1	P33307	960 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	PDX3	P38075	228 aa	Known RBP	3.16	□□□□□ -1.9
CMD1	YBR109C	RBG1	P39729	369 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	AVT2	P39981	480 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	YEL028W	P39989	153 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	YER034W	P40022	185 aa	Known RBP	3.16	□□□□□ -1.9
CMD1	YBR109C	MEP1	P40260	492 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	STB1	P42845	420 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	ELP2	P42935	788 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	FAR7	P43592	221 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	AIM23	P47015	356 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	RTT101	P47050	842 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	GPI8	P49018	411 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	IBD2	P53892	351 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	YNL033W	P53964	284 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	YNL019C	P53975	284 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	PRP38	Q00723	242 aa	Predicted RBP	3.16	□□□□□ -1.9
CMD1	YBR109C	SMA1	Q02651	245 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	CSN9	Q03981	162 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	RPN9	Q04062	393 aa	Known RBP	3.16	□□□□□ -1.9
CMD1	YBR109C	YET2	Q04210	160 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	LOT6	Q07923	191 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	THP1	Q08231	455 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	ESA1	Q08649	445 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	PGC1	Q08959	321 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	YOR342C	Q12182	319 aa		3.16	□□□□□ -1.9
CMD1	YBR109C	RAD52	P06778	471 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	RPL31B	P0C2H9	113 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	COS2	P0CX12	379 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	COS3	P0CX13	379 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	RPL4A	P10664	362 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	MAS2	P11914	482 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	APE1	P14904	514 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	MET16	P18408	261 aa	Predicted RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	CCA1	P21269	546 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	YCR043C	P25361	127 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	BUD23	P25627	275 aa	Predicted RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	BUB2	P26448	306 aa	Predicted RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	PEX3	P28795	441 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	TKL2	P33315	681 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	SKT5	P34226	696 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	FRE2	P36033	711 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	KAP104	P38217	918 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	SLX1	P38324	304 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	ARC40	P38328	384 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	YHI9	P38765	294 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	APE4	P38821	490 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	YDR089W	P38966	869 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	ALD5	P40047	520 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	DDI1	P40087	428 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	YER186C	P40101	306 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	HPM1	P40481	377 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	YRB1	P41920	201 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	RRT5	P43607	289 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	GUF1	P46943	645 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	ATG27	P46989	271 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	YJR154W	P47181	346 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	GTO1	P48239	356 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	ASN2	P49090	572 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	RPL4B	P49626	362 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	NAS6	P50086	228 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	KEL2	P50090	882 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	RMR1	P53060	241 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	BOL2	P53082	120 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	NQM1	P53228	333 aa	Predicted RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	KTR6	P54070	446 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	SLG1	P54867	378 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	SPP2	Q02521	185 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	RMI1	Q02685	241 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	IRC15	Q02733	499 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	TRM12	Q04235	462 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	KRE28	Q04431	385 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	ERB1	Q04660	807 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	AIM32	Q04689	311 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	GAL83	Q04739	417 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	RBS1	Q05672	457 aa	Known RBP	3.15	□□□□□ -1.91
CMD1	YBR109C	NEJ1	Q06148	342 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	ASA1	Q06822	443 aa		3.15	□□□□□ -1.91
CMD1	YBR109C	SNA4	Q07549	140 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms