RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 ATG16Q03818 150 aa0.03□□□□□ -2.4
snR48snR48 URH1Q04179 340 aa0.03□□□□□ -2.4
snR48snR48 SNT309Q06091 175 aaPredicted RBP0.03□□□□□ -2.4
snR48snR48 ARR1Q06596 294 aa0.03□□□□□ -2.4
snR48snR48 SFM1Q12314 213 aa0.03□□□□□ -2.4
snR48snR48 GCN4P03069 281 aa0.02□□□□□ -2.41
snR48snR48 OCA4P25366 362 aa0.02□□□□□ -2.41
snR48snR48 BRF1P29056 596 aa0.02□□□□□ -2.41
snR48snR48 SMC2P38989 1170 aaKnown RBP0.02□□□□□ -2.41
snR48snR48 RBG1P39729 369 aa0.02□□□□□ -2.41
snR48snR48 PCL7P40186 285 aa0.02□□□□□ -2.41
snR48snR48 YGR015CP53208 328 aa0.02□□□□□ -2.41
snR48snR48 SED5Q01590 340 aa0.02□□□□□ -2.41
snR48snR48 COG4Q06096 861 aa0.02□□□□□ -2.41
snR48snR48 RKM1Q08961 583 aaPredicted RBP0.02□□□□□ -2.41
snR48snR48 YPR063CQ12160 140 aa0.02□□□□□ -2.41
snR48snR48 BUG1Q12191 341 aa0.02□□□□□ -2.41
snR48snR48 HIF1Q12373 385 aa0.02□□□□□ -2.41
snR48snR48 RTN2Q12443 393 aa0.02□□□□□ -2.41
snR48snR48 SEM1O94742 89 aa0.01□□□□□ -2.41
snR48snR48 TFS1P14306 219 aa0.01□□□□□ -2.41
snR48snR48 ALG1P16661 449 aa0.01□□□□□ -2.41
snR48snR48 URA4P20051 364 aa0.01□□□□□ -2.41
snR48snR48 DAL81P21657 970 aa0.01□□□□□ -2.41
snR48snR48 YEL043WP32618 956 aa0.01□□□□□ -2.41
snR48snR48 GPX2P38143 162 aa0.01□□□□□ -2.41
snR48snR48 GGC1P38988 300 aa0.01□□□□□ -2.41
snR48snR48 YER079WP40052 210 aaKnown RBP0.01□□□□□ -2.41
snR48snR48 ASN2P49090 572 aaKnown RBP0.01□□□□□ -2.41
snR48snR48 YGR117CP53270 476 aa0.01□□□□□ -2.41
snR48snR48 PRM1P53835 661 aa0.01□□□□□ -2.41
snR48snR48 GTO3Q04806 366 aa0.01□□□□□ -2.41
snR48snR48 RQC1Q05468 723 aaKnown RBP0.01□□□□□ -2.41
snR48snR48 PEX30Q06169 523 aa0.01□□□□□ -2.41
snR48snR48 DIS3Q08162 1001 aaKnown RBP0.01□□□□□ -2.41
snR48snR48 ATP16Q12165 160 aa0.01□□□□□ -2.41
snR48snR48 PRP46Q12417 451 aaPredicted RBP0.01□□□□□ -2.41
snR48snR48 TDH2P00358 332 aaKnown RBP0□□□□□ -2.41
snR48snR48 TDH3P00359 332 aaKnown RBP RIP-Chip data0□□□□□ -2.41not detected
snR48snR48 AAC3P18238 307 aa0□□□□□ -2.41
snR48snR48 CHA1P25379 360 aaKnown RBP0□□□□□ -2.41
snR48snR48 SHE1P38200 338 aa0□□□□□ -2.41
snR48snR48 YJR054WP47114 497 aa0□□□□□ -2.41
snR48snR48 PIB2P53191 635 aa0□□□□□ -2.41
snR48snR48 UTP15Q04305 513 aaKnown RBP0□□□□□ -2.41
snR48snR48 GMC1Q04399 608 aa0□□□□□ -2.41
snR48snR48 APC4Q04601 652 aa0□□□□□ -2.41
snR48snR48 RRP45Q05636 305 aaKnown RBP0□□□□□ -2.41
snR48snR48 OPY2Q06810 360 aa0□□□□□ -2.41
snR48snR48 YOR283WQ12040 230 aaKnown RBP0□□□□□ -2.41
snR48snR48 PAB1P04147 577 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
snR48snR48 RSA4P25382 515 aaKnown RBP-0.01□□□□□ -2.41
snR48snR48 MCM10P32354 571 aa-0.01□□□□□ -2.41
snR48snR48 NTC20P38302 140 aaPredicted RBP-0.01□□□□□ -2.41
snR48snR48 OTU2P38747 307 aaKnown RBP-0.01□□□□□ -2.41
snR48snR48 YER084WP40057 128 aa-0.01□□□□□ -2.41
snR48snR48 MMF1P40185 145 aaKnown RBP-0.01□□□□□ -2.41
snR48snR48 SPO22P40511 975 aa-0.01□□□□□ -2.41
snR48snR48 YCH1P42937 148 aa-0.01□□□□□ -2.41
snR48snR48 CIN2P46670 268 aa-0.01□□□□□ -2.41
snR48snR48 NAS6P50086 228 aa-0.01□□□□□ -2.41
snR48snR48 YGL138CP53122 345 aa-0.01□□□□□ -2.41
snR48snR48 SLT2Q00772 484 aa-0.01□□□□□ -2.41
snR48snR48 VTA1Q06263 330 aa-0.01□□□□□ -2.41
snR48snR48 ADE4P04046 510 aaKnown RBP-0.02□□□□□ -2.41
snR48snR48 DST1P07273 309 aa-0.02□□□□□ -2.41
snR48snR48 CTA1P15202 515 aa-0.02□□□□□ -2.41
snR48snR48 ROX1P25042 368 aa-0.02□□□□□ -2.41
snR48snR48 GEX1P25596 615 aa-0.02□□□□□ -2.41
snR48snR48 ERG3P32353 365 aa-0.02□□□□□ -2.41
snR48snR48 TIR2P33890 251 aa-0.02□□□□□ -2.41
snR48snR48 POP2P39008 433 aa-0.02□□□□□ -2.41
snR48snR48 MET18P40469 1032 aa-0.02□□□□□ -2.41
snR48snR48 ECO1P43605 281 aa-0.02□□□□□ -2.41
snR48snR48 COS5P47187 383 aa-0.02□□□□□ -2.41
snR48snR48 CWC22P53333 577 aaKnown RBP-0.02□□□□□ -2.41
snR48snR48 CSI1Q04368 295 aa-0.02□□□□□ -2.41
snR48snR48 YDR222WQ04925 415 aa-0.02□□□□□ -2.41
snR48snR48 GAS2Q06135 555 aa-0.02□□□□□ -2.41
snR48snR48 DXO1Q06349 442 aa-0.02□□□□□ -2.41
snR48snR48 COS7Q07788 383 aa-0.02□□□□□ -2.41
snR48snR48 YHR086W-AQ3E746 53 aa-0.02□□□□□ -2.41
snR48snR48 HEM4P06174 275 aa-0.03□□□□□ -2.41
snR48snR48 BGL2P15703 313 aaKnown RBP-0.03□□□□□ -2.41
snR48snR48 CLB1P24868 471 aa-0.03□□□□□ -2.41
snR48snR48 SSE1P32589 693 aaKnown RBP-0.03□□□□□ -2.41
snR48snR48 MCR1P36060 302 aaKnown RBP-0.03□□□□□ -2.41
snR48snR48 NRG2P38082 220 aa-0.03□□□□□ -2.41
snR48snR48 NAB3P38996 802 aaKnown RBP RIP-Chip data-0.03□□□□□ -2.41not detected
snR48snR48 NOP16P40007 231 aaKnown RBP-0.03□□□□□ -2.41
snR48snR48 DSK2P48510 373 aa-0.03□□□□□ -2.41
snR48snR48 ROG1P53118 685 aa-0.03□□□□□ -2.41
snR48snR48 UBX2Q04228 584 aa-0.03□□□□□ -2.41
snR48snR48 YOP1Q12402 180 aa-0.03□□□□□ -2.41
snR48snR48 MEX67Q99257 599 aaKnown RBP-0.03□□□□□ -2.41
snR48snR48 RPS14AP06367 137 aaKnown RBP-0.04□□□□□ -2.42
snR48snR48 PHO80P20052 293 aa-0.04□□□□□ -2.42
snR48snR48 RPL16AP26784 199 aaKnown RBP-0.04□□□□□ -2.42
snR48snR48 RPS14BP39516 138 aaKnown RBP-0.04□□□□□ -2.42
snR48snR48 LSM4P40070 187 aaKnown RBP-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms