RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YOP1Q12402 180 aa2.76□□□□□ -1.97
RPC40YPR110C NUP159P40477 1460 aa2.76□□□□□ -1.97
RPC40YPR110C MET5P47169 1442 aa2.76□□□□□ -1.97
RPC40YPR110C STH1P32597 1359 aa2.75□□□□□ -1.97
RPC40YPR110C SSC1P0CS90 654 aaKnown RBP2.75□□□□□ -1.97
RPC40YPR110C SCH9P11792 824 aaKnown RBP2.75□□□□□ -1.97
RPC40YPR110C VMA2P16140 517 aaKnown RBP2.75□□□□□ -1.97
RPC40YPR110C NAM9P27929 486 aa2.75□□□□□ -1.97
RPC40YPR110C PSO2P30620 661 aa2.75□□□□□ -1.97
RPC40YPR110C MNS1P32906 549 aa2.75□□□□□ -1.97
RPC40YPR110C COX14P39103 70 aa2.75□□□□□ -1.97
RPC40YPR110C YGR210CP42942 411 aa2.75□□□□□ -1.97
RPC40YPR110C ATP22P50273 684 aaPredicted RBP2.75□□□□□ -1.97
RPC40YPR110C SPR6Q01684 191 aa2.75□□□□□ -1.97
RPC40YPR110C YPR078CQ06813 372 aa2.75□□□□□ -1.97
RPC40YPR110C FDH1Q08911 376 aa2.75□□□□□ -1.97
RPC40YPR110C TMS1Q12116 473 aa2.75□□□□□ -1.97
RPC40YPR110C YBT1P32386 1661 aa2.74□□□□□ -1.97
RPC40YPR110C GEA2P39993 1459 aaKnown RBP2.74□□□□□ -1.97
RPC40YPR110C TPK3P05986 398 aa2.74□□□□□ -1.97
RPC40YPR110C RPS8AP0CX39 200 aaKnown RBP2.74□□□□□ -1.97
RPC40YPR110C RPS8BP0CX40 200 aaKnown RBP2.74□□□□□ -1.97
RPC40YPR110C THR4P16120 514 aaKnown RBP2.74□□□□□ -1.97
RPC40YPR110C DEG1P31115 442 aaKnown RBP2.74□□□□□ -1.97
RPC40YPR110C MSG5P38590 489 aa2.74□□□□□ -1.97
RPC40YPR110C NDT80P38830 627 aa2.74□□□□□ -1.97
RPC40YPR110C PTH1P38876 190 aaKnown RBP2.74□□□□□ -1.97
RPC40YPR110C MDE1P47095 244 aa2.74□□□□□ -1.97
RPC40YPR110C MRM2P53123 320 aa2.74□□□□□ -1.97
RPC40YPR110C RET3P53600 189 aa2.74□□□□□ -1.97
RPC40YPR110C PDR16P53860 351 aaKnown RBP2.74□□□□□ -1.97
RPC40YPR110C HRI1Q05905 244 aaKnown RBP2.74□□□□□ -1.97
RPC40YPR110C MRPL35Q06678 367 aa2.74□□□□□ -1.97
RPC40YPR110C ASA1Q06822 443 aa2.74□□□□□ -1.97
RPC40YPR110C YRM1Q12340 786 aa2.74□□□□□ -1.97
RPC40YPR110C SNT2P53127 1403 aa2.74□□□□□ -1.97
RPC40YPR110C SPO14P36126 1683 aa2.73□□□□□ -1.97
RPC40YPR110C VPS15P22219 1454 aa2.73□□□□□ -1.97
RPC40YPR110C MAS2P11914 482 aa2.73□□□□□ -1.97
RPC40YPR110C TAL1P15019 335 aaKnown RBP2.73□□□□□ -1.97
RPC40YPR110C RPB5P20434 215 aa2.73□□□□□ -1.97
RPC40YPR110C DAL2P25335 343 aa2.73□□□□□ -1.97
RPC40YPR110C POP5P28005 173 aa2.73□□□□□ -1.97
RPC40YPR110C SMI1P32566 505 aa2.73□□□□□ -1.97
RPC40YPR110C TIR2P33890 251 aa2.73□□□□□ -1.97
RPC40YPR110C GPX2P38143 162 aa2.73□□□□□ -1.97
RPC40YPR110C LCP5P40079 357 aaPredicted RBP2.73□□□□□ -1.97
RPC40YPR110C PAN6P40459 309 aa2.73□□□□□ -1.97
RPC40YPR110C YIL029CP40538 142 aa2.73□□□□□ -1.97
RPC40YPR110C SPG5P42933 373 aa2.73□□□□□ -1.97
RPC40YPR110C ABM1P47146 123 aa2.73□□□□□ -1.97
RPC40YPR110C CUE3P53137 624 aaKnown RBP2.73□□□□□ -1.97
RPC40YPR110C AQR1P53943 586 aa2.73□□□□□ -1.97
RPC40YPR110C MTQ1P53944 314 aa2.73□□□□□ -1.97
RPC40YPR110C NUP116Q02630 1113 aa2.73□□□□□ -1.97
RPC40YPR110C YMR102CQ03177 834 aa2.73□□□□□ -1.97
RPC40YPR110C PRM6Q04705 352 aa2.73□□□□□ -1.97
RPC40YPR110C LOT6Q07923 191 aa2.73□□□□□ -1.97
RPC40YPR110C PEX27Q08580 376 aa2.73□□□□□ -1.97
RPC40YPR110C YGK3Q12222 375 aaPredicted RBP2.73□□□□□ -1.97
RPC40YPR110C IRC20Q06554 1556 aa2.73□□□□□ -1.97
RPC40YPR110C DPH5P32469 300 aaPredicted RBP2.72□□□□□ -1.97
RPC40YPR110C EFB1P32471 206 aaKnown RBP2.72□□□□□ -1.97
RPC40YPR110C YHK8P38776 514 aa2.72□□□□□ -1.97
RPC40YPR110C YHR122WP38829 231 aa2.72□□□□□ -1.97
RPC40YPR110C MPS2P53159 387 aa2.72□□□□□ -1.97
RPC40YPR110C RRB1Q04225 511 aaKnown RBP2.72□□□□□ -1.97
RPC40YPR110C MGR3Q04472 501 aa2.72□□□□□ -1.97
RPC40YPR110C PML1Q07930 204 aaPredicted RBP2.72□□□□□ -1.97
RPC40YPR110C SMC5Q08204 1093 aa2.72□□□□□ -1.97
RPC40YPR110C GDB1Q06625 1536 aa2.72□□□□□ -1.97
RPC40YPR110C TY3B-GQ99315 1547 aa2.72□□□□□ -1.97
RPC40YPR110C GEA1P47102 1408 aaPredicted RBP2.71□□□□□ -1.98
RPC40YPR110C PIS1P06197 220 aaKnown RBP2.71□□□□□ -1.98
RPC40YPR110C MSI1P13712 422 aa2.71□□□□□ -1.98
RPC40YPR110C PET123P17558 318 aa2.71□□□□□ -1.98
RPC40YPR110C SAG1P20840 650 aa2.71□□□□□ -1.98
RPC40YPR110C MRPL8P22353 238 aa2.71□□□□□ -1.98
RPC40YPR110C MSK1P32048 576 aa2.71□□□□□ -1.98
RPC40YPR110C RAD5P32849 1169 aaPredicted RBP2.71□□□□□ -1.98
RPC40YPR110C VAM7P32912 316 aa2.71□□□□□ -1.98
RPC40YPR110C GEP4P38812 185 aa2.71□□□□□ -1.98
RPC40YPR110C LYS12P40495 371 aaKnown RBP2.71□□□□□ -1.98
RPC40YPR110C MAM33P40513 266 aa2.71□□□□□ -1.98
RPC40YPR110C YJR085CP47131 105 aaKnown RBP2.71□□□□□ -1.98
RPC40YPR110C SHE4P51534 789 aa2.71□□□□□ -1.98
RPC40YPR110C RRP46P53256 223 aaPredicted RBP2.71□□□□□ -1.98
RPC40YPR110C SCW10Q04951 389 aa2.71□□□□□ -1.98
RPC40YPR110C IRC25Q07951 179 aa2.71□□□□□ -1.98
RPC40YPR110C EAF3Q12432 401 aa2.71□□□□□ -1.98
RPC40YPR110C AIM45Q12480 344 aaKnown RBP2.71□□□□□ -1.98
RPC40YPR110C PDR12Q02785 1511 aa2.71□□□□□ -1.98
RPC40YPR110C LTE1P07866 1435 aa2.7□□□□□ -1.98
RPC40YPR110C STE3P06783 470 aa2.7□□□□□ -1.98
RPC40YPR110C GRR1P24814 1151 aa2.7□□□□□ -1.98
RPC40YPR110C HMX1P32339 317 aa2.7□□□□□ -1.98
RPC40YPR110C CSE2P33308 149 aa2.7□□□□□ -1.98
RPC40YPR110C LCB3P47013 409 aa2.7□□□□□ -1.98
RPC40YPR110C AIM24P47127 394 aa2.7□□□□□ -1.98
RPC40YPR110C MST27P53176 234 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 125.2 ms