RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C YLR177WQ06251 628 aa1.14□□□□□ -2.23
NIP100YPL174C YPR195CQ06594 109 aa1.14□□□□□ -2.23
NIP100YPL174C FLO11P08640 1367 aa1.14□□□□□ -2.23
NIP100YPL174C STE2D6VTK4 431 aa1.14□□□□□ -2.23
NIP100YPL174C LDS1P31379 325 aa1.14□□□□□ -2.23
NIP100YPL174C SPO23P33757 523 aa1.14□□□□□ -2.23
NIP100YPL174C MCR1P36060 302 aaKnown RBP1.14□□□□□ -2.23
NIP100YPL174C SRP72P38688 640 aaKnown RBP1.14□□□□□ -2.23
NIP100YPL174C LSM12P38828 187 aaKnown RBP1.14□□□□□ -2.23
NIP100YPL174C FRT2P39734 528 aa1.14□□□□□ -2.23
NIP100YPL174C PAC11P40960 533 aa1.14□□□□□ -2.23
NIP100YPL174C SEC27P41811 889 aaKnown RBP1.14□□□□□ -2.23
NIP100YPL174C RPN9Q04062 393 aaKnown RBP1.14□□□□□ -2.23
NIP100YPL174C GAS2Q06135 555 aa1.14□□□□□ -2.23
NIP100YPL174C RPL16AP26784 199 aaKnown RBP1.13□□□□□ -2.23
NIP100YPL174C PXA2P34230 853 aa1.13□□□□□ -2.23
NIP100YPL174C ANR2P36090 516 aaPredicted RBP1.13□□□□□ -2.23
NIP100YPL174C MRPL27P36526 146 aaPredicted RBP1.13□□□□□ -2.23
NIP100YPL174C STE24P47154 453 aa1.13□□□□□ -2.23
NIP100YPL174C BIO3P50277 480 aa1.13□□□□□ -2.23
NIP100YPL174C YGR018CP53211 109 aa1.13□□□□□ -2.23
NIP100YPL174C ECM7Q06200 448 aa1.13□□□□□ -2.23
NIP100YPL174C BI3Q9ZZW7 517 aa1.13□□□□□ -2.23
NIP100YPL174C COX3P00420 269 aa1.13□□□□□ -2.23
NIP100YPL174C CPR2P23285 205 aa1.13□□□□□ -2.23
NIP100YPL174C URA7P28274 579 aaKnown RBP1.13□□□□□ -2.23
NIP100YPL174C ASC1P38011 319 aaKnown RBP1.13□□□□□ -2.23
NIP100YPL174C QDR3P38227 689 aa1.13□□□□□ -2.23
NIP100YPL174C YHR182WP38870 785 aa1.13□□□□□ -2.23
NIP100YPL174C STB1P42845 420 aa1.13□□□□□ -2.23
NIP100YPL174C COQ5P49017 307 aa1.13□□□□□ -2.23
NIP100YPL174C MRX11Q03079 207 aa1.13□□□□□ -2.23
NIP100YPL174C YLR456WQ06199 204 aa1.13□□□□□ -2.23
NIP100YPL174C YDL109CQ12103 647 aa1.13□□□□□ -2.23
NIP100YPL174C FUN26P31381 517 aa1.12□□□□□ -2.23
NIP100YPL174C DTR1P38125 572 aa1.12□□□□□ -2.23
NIP100YPL174C STN1P38960 494 aa1.12□□□□□ -2.23
NIP100YPL174C SER3P40054 469 aa1.12□□□□□ -2.23
NIP100YPL174C PRP38Q00723 242 aaPredicted RBP1.12□□□□□ -2.23
NIP100YPL174C NSE1Q07913 336 aa1.12□□□□□ -2.23
NIP100YPL174C LDS2Q08218 356 aa1.12□□□□□ -2.23
NIP100YPL174C ARO3P14843 370 aaKnown RBP1.12□□□□□ -2.23
NIP100YPL174C AST1P35183 429 aa1.12□□□□□ -2.23
NIP100YPL174C GPX2P38143 162 aa1.12□□□□□ -2.23
NIP100YPL174C YDR541CQ03049 344 aa1.12□□□□□ -2.23
NIP100YPL174C AAD15Q08361 143 aa1.12□□□□□ -2.23
NIP100YPL174C DDC1Q08949 612 aa1.12□□□□□ -2.23
NIP100YPL174C PGA3Q12746 312 aaKnown RBP1.12□□□□□ -2.23
NIP100YPL174C SMC6Q12749 1114 aa1.12□□□□□ -2.23
NIP100YPL174C RPC53P25441 422 aa1.11□□□□□ -2.23
NIP100YPL174C TPS2P31688 896 aaKnown RBP1.11□□□□□ -2.23
NIP100YPL174C YSC83P32792 385 aa1.11□□□□□ -2.23
NIP100YPL174C PDC2P32896 925 aa1.11□□□□□ -2.23
NIP100YPL174C RRT13P40042 185 aa1.11□□□□□ -2.23
NIP100YPL174C LSM5P40089 93 aaKnown RBP1.11□□□□□ -2.23
NIP100YPL174C TCB2P48231 1178 aa1.11□□□□□ -2.23
NIP100YPL174C VHT1P53241 593 aa1.11□□□□□ -2.23
NIP100YPL174C SLT2Q00772 484 aa1.11□□□□□ -2.23
NIP100YPL174C SLF1Q12034 447 aaKnown RBP1.11□□□□□ -2.23
NIP100YPL174C RFM1Q12192 310 aa1.11□□□□□ -2.23
NIP100YPL174C FAB1P34756 2278 aa1.11□□□□□ -2.23
NIP100YPL174C YBR056W-AI2HB52 66 aa1.11□□□□□ -2.23
NIP100YPL174C YPR096CO13587 100 aa1.11□□□□□ -2.23
NIP100YPL174C MAS2P11914 482 aa1.11□□□□□ -2.23
NIP100YPL174C ECT1P33412 323 aa1.11□□□□□ -2.23
NIP100YPL174C NRM1P53718 249 aa1.11□□□□□ -2.23
NIP100YPL174C TIR4Q12218 487 aaPredicted RBP1.11□□□□□ -2.23
NIP100YPL174C GPM3Q12326 303 aa1.11□□□□□ -2.23
NIP100YPL174C AUS1Q08409 1394 aa1.1□□□□□ -2.23
NIP100YPL174C MRPL8P22353 238 aa1.1□□□□□ -2.23
NIP100YPL174C GEX1P25596 615 aa1.1□□□□□ -2.23
NIP100YPL174C SPS19P32573 292 aaKnown RBP1.1□□□□□ -2.23
NIP100YPL174C SKG6P32900 734 aaPredicted RBP1.1□□□□□ -2.23
NIP100YPL174C LTV1P34078 463 aa1.1□□□□□ -2.23
NIP100YPL174C YBL028CP38202 106 aa1.1□□□□□ -2.23
NIP100YPL174C CHL4P38907 458 aa1.1□□□□□ -2.23
NIP100YPL174C SNL1P40548 159 aa1.1□□□□□ -2.23
NIP100YPL174C YJR030CP47101 745 aa1.1□□□□□ -2.23
NIP100YPL174C CIK1Q01649 594 aa1.1□□□□□ -2.23
NIP100YPL174C SHS1Q07657 551 aa1.1□□□□□ -2.23
NIP100YPL174C YDR061WQ12298 539 aa1.1□□□□□ -2.23
NIP100YPL174C SSE1P32589 693 aaKnown RBP1.1□□□□□ -2.23
NIP100YPL174C ALD5P40047 520 aaKnown RBP1.1□□□□□ -2.23
NIP100YPL174C YIL059CP40520 121 aa1.1□□□□□ -2.23
NIP100YPL174C CDH1P53197 566 aa1.1□□□□□ -2.23
NIP100YPL174C YHC1Q05900 231 aaKnown RBP1.1□□□□□ -2.23
NIP100YPL174C YOL029CQ08187 201 aa1.1□□□□□ -2.23
NIP100YPL174C HEM4P06174 275 aa1.09□□□□□ -2.23
NIP100YPL174C YKL071WP36086 256 aa1.09□□□□□ -2.23
NIP100YPL174C ATP16Q12165 160 aa1.09□□□□□ -2.23
NIP100YPL174C GLE1Q12315 538 aa1.09□□□□□ -2.23
NIP100YPL174C RNH203Q12338 110 aa1.09□□□□□ -2.23
NIP100YPL174C ISN1Q99312 450 aa1.09□□□□□ -2.23
NIP100YPL174C BGL2P15703 313 aaKnown RBP1.09□□□□□ -2.24
NIP100YPL174C TOA1P32773 286 aa1.09□□□□□ -2.24
NIP100YPL174C PEX5P35056 612 aa1.09□□□□□ -2.24
NIP100YPL174C SPP381P38282 291 aaPredicted RBP1.09□□□□□ -2.24
NIP100YPL174C ASN2P49090 572 aaKnown RBP1.09□□□□□ -2.24
NIP100YPL174C TOM22P49334 152 aa1.09□□□□□ -2.24
NIP100YPL174C RTT102P53330 157 aa1.09□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms