RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C RAD23P32628 398 aaKnown RBP2.05□□□□□ -2.08
VTI1YMR197C FRE1P32791 686 aa2.05□□□□□ -2.08
VTI1YMR197C BUD2P33314 1104 aa2.05□□□□□ -2.08
VTI1YMR197C BMH2P34730 273 aaKnown RBP2.05□□□□□ -2.08
VTI1YMR197C RPC25P35718 212 aa2.05□□□□□ -2.08
VTI1YMR197C YHR122WP38829 231 aa2.05□□□□□ -2.08
VTI1YMR197C YHR177WP38867 453 aa2.05□□□□□ -2.08
VTI1YMR197C CCT2P39076 527 aaKnown RBP2.05□□□□□ -2.08
VTI1YMR197C SCC4P40090 624 aa2.05□□□□□ -2.08
VTI1YMR197C YPS6P40583 537 aa2.05□□□□□ -2.08
VTI1YMR197C YJR154WP47181 346 aa2.05□□□□□ -2.08
VTI1YMR197C TIS11P47977 285 aa2.05□□□□□ -2.08
VTI1YMR197C DRN1P53255 507 aaKnown RBP2.05□□□□□ -2.08
VTI1YMR197C BUD32P53323 261 aa2.05□□□□□ -2.08
VTI1YMR197C YNL260CP53846 198 aa2.05□□□□□ -2.08
VTI1YMR197C YNL134CP53912 376 aaKnown RBP2.05□□□□□ -2.08
VTI1YMR197C PET117Q02771 107 aa2.05□□□□□ -2.08
VTI1YMR197C MRP51Q02950 344 aa2.05□□□□□ -2.08
VTI1YMR197C GIP3Q03016 1276 aa2.05□□□□□ -2.08
VTI1YMR197C TAF12Q03761 539 aa2.05□□□□□ -2.08
VTI1YMR197C GPN3Q06543 272 aa2.05□□□□□ -2.08
VTI1YMR197C MHR1Q06630 226 aa2.05□□□□□ -2.08
VTI1YMR197C SHS1Q07657 551 aa2.05□□□□□ -2.08
VTI1YMR197C CLP1Q08685 445 aaPredicted RBP2.05□□□□□ -2.08
VTI1YMR197C YDR262WQ12331 272 aa2.05□□□□□ -2.08
VTI1YMR197C FMP16Q12497 93 aa2.05□□□□□ -2.08
VTI1YMR197C HIS4P00815 799 aaKnown RBP2.04□□□□□ -2.08
VTI1YMR197C DBR1P24309 405 aaKnown RBP2.04□□□□□ -2.08
VTI1YMR197C RNA14P25298 677 aaKnown RBP2.04□□□□□ -2.08
VTI1YMR197C CIN8P27895 1000 aa2.04□□□□□ -2.08
VTI1YMR197C CBF5P33322 483 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
VTI1YMR197C ECT1P33412 323 aa2.04□□□□□ -2.08
VTI1YMR197C TAE1P38340 232 aa2.04□□□□□ -2.08
VTI1YMR197C YHR045WP38775 560 aa2.04□□□□□ -2.08
VTI1YMR197C NDT80P38830 627 aa2.04□□□□□ -2.08
VTI1YMR197C RTR1P40084 226 aaPredicted RBP2.04□□□□□ -2.08
VTI1YMR197C MMF1P40185 145 aaKnown RBP2.04□□□□□ -2.08
VTI1YMR197C CDC40P40968 455 aaPredicted RBP2.04□□□□□ -2.08
VTI1YMR197C BNA6P43619 295 aa2.04□□□□□ -2.08
VTI1YMR197C SCD6P45978 349 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
VTI1YMR197C TRS85P46944 698 aa2.04□□□□□ -2.08
VTI1YMR197C YGL039WP53183 348 aaKnown RBP2.04□□□□□ -2.08
VTI1YMR197C RET3P53600 189 aa2.04□□□□□ -2.08
VTI1YMR197C MMT1Q03218 510 aa2.04□□□□□ -2.08
VTI1YMR197C YDR387CQ04162 555 aa2.04□□□□□ -2.08
VTI1YMR197C URH1Q04179 340 aa2.04□□□□□ -2.08
VTI1YMR197C URC2Q04411 772 aa2.04□□□□□ -2.08
VTI1YMR197C BNA5Q05979 453 aa2.04□□□□□ -2.08
VTI1YMR197C MRPL51Q06090 140 aaPredicted RBP2.04□□□□□ -2.08
VTI1YMR197C ECM7Q06200 448 aa2.04□□□□□ -2.08
VTI1YMR197C MDM36Q06820 579 aa2.04□□□□□ -2.08
VTI1YMR197C YOL075CQ08234 1294 aa2.04□□□□□ -2.08
VTI1YMR197C REX4Q08237 289 aa2.04□□□□□ -2.08
VTI1YMR197C BTS1Q12051 335 aa2.04□□□□□ -2.08
VTI1YMR197C PKH2Q12236 1081 aaKnown RBP2.04□□□□□ -2.08
VTI1YMR197C RNH203Q12338 110 aa2.04□□□□□ -2.08
VTI1YMR197C PAA1Q12447 191 aaKnown RBP2.04□□□□□ -2.08
VTI1YMR197C RGS2Q99188 309 aa2.04□□□□□ -2.08
VTI1YMR197C FSH3Q99369 266 aa2.04□□□□□ -2.08
VTI1YMR197C SUC2P00724 532 aa2.03□□□□□ -2.08
VTI1YMR197C ARG4P04076 463 aaPredicted RBP2.03□□□□□ -2.08
VTI1YMR197C OPI3P05375 206 aa2.03□□□□□ -2.08
VTI1YMR197C PRB1P09232 635 aa2.03□□□□□ -2.08
VTI1YMR197C IMA3P0CW40 589 aa2.03□□□□□ -2.08
VTI1YMR197C IMA4P0CW41 589 aa2.03□□□□□ -2.08
VTI1YMR197C RPL18AP0CX49 186 aaKnown RBP2.03□□□□□ -2.08
VTI1YMR197C RPL18BP0CX50 186 aaKnown RBP2.03□□□□□ -2.08
VTI1YMR197C RPL12AP0CX53 165 aaKnown RBP2.03□□□□□ -2.08
VTI1YMR197C RPL12BP0CX54 165 aa2.03□□□□□ -2.08
VTI1YMR197C CLN3P13365 580 aa2.03□□□□□ -2.08
VTI1YMR197C CPR1P14832 162 aaKnown RBP2.03□□□□□ -2.08
VTI1YMR197C PRS1P32895 427 aaKnown RBP2.03□□□□□ -2.08
VTI1YMR197C SKG6P32900 734 aaPredicted RBP2.03□□□□□ -2.08
VTI1YMR197C SKN1P33336 771 aa2.03□□□□□ -2.08
VTI1YMR197C YBL059WP34224 193 aa2.03□□□□□ -2.08
VTI1YMR197C DOA1P36037 715 aa2.03□□□□□ -2.08
VTI1YMR197C STP2P38704 541 aa2.03□□□□□ -2.08
VTI1YMR197C SIP3P38717 1229 aa2.03□□□□□ -2.08
VTI1YMR197C YAL037WP39728 267 aa2.03□□□□□ -2.08
VTI1YMR197C YER034WP40022 185 aaKnown RBP2.03□□□□□ -2.08
VTI1YMR197C YER085CP40058 173 aa2.03□□□□□ -2.08
VTI1YMR197C FAU1P40099 211 aa2.03□□□□□ -2.08
VTI1YMR197C YMR134WP40207 237 aa2.03□□□□□ -2.08
VTI1YMR197C FMC1P40491 155 aa2.03□□□□□ -2.08
VTI1YMR197C UTP25P40498 721 aaKnown RBP2.03□□□□□ -2.08
VTI1YMR197C MSS2P40990 351 aa2.03□□□□□ -2.08
VTI1YMR197C YGR210CP42942 411 aa2.03□□□□□ -2.08
VTI1YMR197C STE24P47154 453 aa2.03□□□□□ -2.08
VTI1YMR197C GPI1P53306 609 aa2.03□□□□□ -2.08
VTI1YMR197C MNT4P53745 580 aa2.03□□□□□ -2.08
VTI1YMR197C PGA2P53903 129 aa2.03□□□□□ -2.08
VTI1YMR197C SRL4Q03085 281 aa2.03□□□□□ -2.08
VTI1YMR197C AIM33Q04516 312 aa2.03□□□□□ -2.08
VTI1YMR197C IVY1Q04934 453 aa2.03□□□□□ -2.08
VTI1YMR197C SSQ1Q05931 657 aaPredicted RBP2.03□□□□□ -2.08
VTI1YMR197C BUR2Q05949 395 aa2.03□□□□□ -2.08
VTI1YMR197C IMA2Q08295 589 aa2.03□□□□□ -2.08
VTI1YMR197C DNL4Q08387 944 aaPredicted RBP2.03□□□□□ -2.08
VTI1YMR197C ATG34Q12292 412 aa2.03□□□□□ -2.08
VTI1YMR197C YPR1Q12458 312 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms