RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	GCS1	P35197	352 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	STB6	P36085	766 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	YDR089W	P38966	869 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	FRT2	P39734	528 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	SER3	P40054	469 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	LSM5	P40089	93 aa	Known RBP	3.15	□□□□□ -1.9
VPS33	YLR396C	IKS1	P47042	667 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	NUP84	P52891	726 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	BIO4	P53630	237 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	PRO2	P54885	456 aa	Known RBP	3.15	□□□□□ -1.9
VPS33	YLR396C	DYN3	Q04949	312 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	HEL2	Q05580	639 aa	Known RBP	3.15	□□□□□ -1.9
VPS33	YLR396C	DXO1	Q06349	442 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	YLR031W	Q07978	186 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	VPS54	Q12071	889 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	HSP42	Q12329	375 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	RRD2	Q12461	358 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	YBR298C-A	Q8TGK4	73 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	RHO1	P06780	209 aa	Known RBP	3.15	□□□□□ -1.91
VPS33	YLR396C	SNF4	P12904	322 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	RPB4	P20433	221 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS33	YLR396C	PEX3	P28795	441 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	ATP11	P32453	318 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	ACP1	P32463	125 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	FRE1	P32791	686 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	MYO3	P36006	1272 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
VPS33	YLR396C	OTU2	P38747	307 aa	Known RBP	3.15	□□□□□ -1.91
VPS33	YLR396C	VMA7	P39111	118 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	YFH7	P43591	353 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	BIR1	P47134	954 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	RPA49	Q01080	415 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS33	YLR396C	RLI1	Q03195	608 aa	Known RBP	3.15	□□□□□ -1.91
VPS33	YLR396C	SPC2	Q04969	178 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	MDM36	Q06820	579 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	RAX1	Q08760	435 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	KEL3	Q08979	651 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS33	YLR396C	THP3	Q12049	470 aa	Known RBP	3.15	□□□□□ -1.91
VPS33	YLR396C	RRG1	Q12167	365 aa	Predicted RBP	3.15	□□□□□ -1.91
VPS33	YLR396C	YDL009C	Q12210	107 aa		3.15	□□□□□ -1.91
VPS33	YLR396C	MES1	P00958	751 aa	Known RBP	3.14	□□□□□ -1.91
VPS33	YLR396C	FUR1	P18562	216 aa	Known RBP	3.14	□□□□□ -1.91
VPS33	YLR396C	MGT1	P26188	188 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	MUD1	P32605	298 aa	Known RBP	3.14	□□□□□ -1.91
VPS33	YLR396C	SSO1	P32867	290 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	SAS3	P34218	831 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	YKL063C	P35725	167 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	SMF2	P38778	549 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	YAT2	P40017	923 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	YMR134W	P40207	237 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	CHS6	P40955	746 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	MEP2	P41948	499 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	YGR210C	P42942	411 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	GPI1	P53306	609 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	PGA2	P53903	129 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	ARX1	Q03862	593 aa	Known RBP	3.14	□□□□□ -1.91
VPS33	YLR396C	YMR226C	Q05016	267 aa	Known RBP	3.14	□□□□□ -1.91
VPS33	YLR396C	PEX10	Q05568	337 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	SLM3	Q12093	417 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	LDB17	Q12342	491 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	FMP16	Q12497	93 aa		3.14	□□□□□ -1.91
VPS33	YLR396C	NFT1	P0CE68	1218 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	GLK1	P17709	500 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	DAP2	P18962	818 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	CMK2	P22517	447 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	SPB1	P25582	841 aa	Predicted RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	NUP2	P32499	720 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	CYS4	P32582	507 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	SPR1	P32603	445 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	IMP3	P32899	183 aa	Predicted RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	ATP3	P38077	311 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	RFS1	P38234	210 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	POP4	P38336	279 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	MSS2	P40990	351 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	APS3	P47064	194 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	RET3	P53600	189 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	BNI5	P53890	448 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	VAC7	P53950	1165 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	RMT2	Q03305	412 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	YMR155W	Q03795	547 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	YMR317W	Q04893	1140 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	FAR10	Q06001	478 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	MRPL51	Q06090	140 aa	Predicted RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	LOT6	Q07923	191 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	RKM5	Q12367	367 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	GTT2	Q12390	233 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	IPP1	P00817	287 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	GRX2	P17695	143 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	CTR86	P25355	563 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	YUR1	P26725	428 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	VMA6	P32366	345 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	ARC19	P33204	171 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	MRPL40	P36534	297 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	ECM31	P38122	312 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	STP2	P38704	541 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	YER137C	P40083	148 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	DDI1	P40087	428 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	YER186C	P40101	306 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	HPM1	P40481	377 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	YRB2	P40517	327 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms